Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 2.5e-30 134.8 69 100.0
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 1.4e-17 92.4 58 77.6
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 1.9e-17 92.0 63 74.6
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 2.4e-17 91.7 63 71.4
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 4.2e-17 90.9 58 79.3
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 4.2e-17 90.9 64 68.8
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 5.4e-17 90.5 60 78.3
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 5.4e-17 90.5 58 72.4
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 5.4e-17 90.5 66 66.7
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 7.1e-17 90.1 58 75.9
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 7.1e-17 90.1 58 75.9
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 9.3e-17 89.7 58 75.9
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 9.3e-17 89.7 58 75.9
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 9.3e-17 89.7 58 75.9
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 9.3e-17 89.7 55 74.5
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 9.3e-17 89.7 53 79.2
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 9.3e-17 89.7 53 79.2
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 9.3e-17 89.7 58 75.9
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 9.3e-17 89.7 53 79.2
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 9.3e-17 89.7 48 87.5
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 1.2e-16 89.4 56 75.0
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 1.2e-16 89.4 57 77.2
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 1.6e-16 89.0 58 75.9
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 1.6e-16 89.0 58 75.9
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 1.6e-16 89.0 58 74.1
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 2.1e-16 88.6 58 72.4
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 2.7e-16 88.2 56 75.0
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 2.7e-16 88.2 67 67.2
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 2.7e-16 88.2 60 75.0
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 2.7e-16 88.2 58 75.9
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 3.5e-16 87.8 59 74.6
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 3.5e-16 87.8 59 74.6
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 3.5e-16 87.8 55 74.5
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 3.5e-16 87.8 57 75.4
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 3.5e-16 87.8 50 82.0
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 3.5e-16 87.8 50 82.0
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 4.6e-16 87.4 60 75.0
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 4.6e-16 87.4 58 74.1
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 6.0e-16 87.0 59 76.3
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 6.0e-16 87.0 61 72.1
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 7.8e-16 86.7 60 73.3
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 7.8e-16 86.7 57 73.7
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 1.0e-15 86.3 52 78.8
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 1.0e-15 86.3 52 78.8
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 1.0e-15 86.3 52 78.8
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 1.0e-15 86.3 52 78.8
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 1.3e-15 85.9 58 75.9
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 1.3e-15 85.9 58 74.1
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 1.3e-15 85.9 55 74.5
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 1.3e-15 85.9 59 74.6
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 1.7e-15 85.5 57 71.9
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 1.7e-15 85.5 57 71.9
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 1.7e-15 85.5 57 71.9
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 2.3e-15 85.1 48 81.2
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 2.3e-15 85.1 55 72.7
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 2.3e-15 85.1 62 71.0
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 2.3e-15 85.1 49 81.6
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 2.3e-15 85.1 56 71.4
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 2.3e-15 85.1 53 75.5
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 2.3e-15 85.1 55 72.7
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 2.3e-15 85.1 56 71.4
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 3.0e-15 84.7 59 67.8
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 3.9e-15 84.3 56 71.4
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 3.9e-15 84.3 60 71.7
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 3.9e-15 84.3 61 70.5
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 5.1e-15 84.0 57 70.2
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 5.1e-15 84.0 68 64.7
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 5.1e-15 84.0 56 71.4
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 6.6e-15 83.6 57 71.9
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 6.6e-15 83.6 59 67.8
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 6.6e-15 83.6 60 70.0
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 8.7e-15 83.2 48 79.2
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 8.7e-15 83.2 67 62.7
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 8.7e-15 83.2 54 70.4
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 8.7e-15 83.2 58 72.4
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 1.1e-14 82.8 60 71.7
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 1.1e-14 82.8 60 71.7
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 1.5e-14 82.4 56 71.4
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 1.5e-14 82.4 59 66.1
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 1.9e-14 82.0 62 71.0
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 1.9e-14 82.0 59 67.8
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 2.5e-14 81.6 48 79.2
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 3.3e-14 81.3 48 79.2
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 3.3e-14 81.3 59 67.8
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 3.3e-14 81.3 62 67.7
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 3.3e-14 81.3 56 67.9
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 3.3e-14 81.3 66 62.1
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 4.3e-14 80.9 58 67.2
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 7.3e-14 80.1 56 67.9
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 9.6e-14 79.7 60 66.7
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 9.6e-14 79.7 53 71.7
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 9.6e-14 79.7 55 70.9
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 9.6e-14 79.7 55 70.9
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 2.1e-13 78.6 56 67.9
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 2.8e-13 78.2 63 66.7
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 8.1e-13 76.6 56 66.1
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 1.1e-12 76.3 65 58.5
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 1.4e-12 75.9 56 66.1
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 1.4e-12 75.9 56 66.1
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 1.4e-12 75.9 56 64.3
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 2.4e-12 75.1 56 62.5
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 4.0e-12 74.3 46 71.7
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 1.3e-10 69.3 57 57.9
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 8.4e-10 66.6 38 78.9
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 1.2e-08 62.8 38 73.7
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 1.6e-08 62.4 49 59.2
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 1.1e-06 56.2 54 57.4
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 1.5e-06 55.8 49 53.1
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 4.3e-06 54.3 39 61.5


User provided reference genes

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