Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 2.1e-51 205.3 97 100.0
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 1.2e-33 146.4 74 83.8
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 9.9e-33 143.3 77 79.2
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 1.3e-32 142.9 74 81.1
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 1.4e-31 139.4 74 78.4
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 1.9e-31 139.0 74 81.1
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 2.4e-31 138.7 74 81.1
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 3.2e-31 138.3 74 79.7
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 4.2e-31 137.9 74 78.4
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 7.1e-31 137.1 74 78.4
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 7.1e-31 137.1 74 78.4
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 9.3e-31 136.7 74 78.4
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 9.3e-31 136.7 78 74.4
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 9.3e-31 136.7 74 79.7
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 9.3e-31 136.7 74 79.7
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 1.2e-30 136.3 74 78.4
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 1.2e-30 136.3 74 78.4
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 1.2e-30 136.3 74 78.4
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 1.2e-30 136.3 74 77.0
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 1.6e-30 136.0 74 75.7
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 1.6e-30 136.0 74 75.7
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 1.6e-30 136.0 74 77.0
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 1.6e-30 136.0 74 77.0
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 1.6e-30 136.0 74 77.0
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 2.1e-30 135.6 74 77.0
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 2.7e-30 135.2 74 75.7
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 2.7e-30 135.2 74 75.7
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 3.5e-30 134.8 74 75.7
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 3.5e-30 134.8 74 77.0
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 3.5e-30 134.8 74 77.0
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 6.0e-30 134.0 74 74.3
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 6.0e-30 134.0 74 77.0
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 6.0e-30 134.0 74 77.0
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 6.0e-30 134.0 74 74.3
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 6.0e-30 134.0 74 74.3
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 6.0e-30 134.0 74 75.7
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 7.9e-30 133.7 72 77.8
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 7.9e-30 133.7 72 77.8
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 7.9e-30 133.7 72 77.8
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 7.9e-30 133.7 74 78.4
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 1.0e-29 133.3 74 73.0
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 1.0e-29 133.3 74 74.3
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 1.0e-29 133.3 74 74.3
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 1.3e-29 132.9 74 75.7
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 1.3e-29 132.9 74 75.7
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 1.8e-29 132.5 74 75.7
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 1.8e-29 132.5 74 75.7
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 1.8e-29 132.5 74 74.3
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 1.8e-29 132.5 74 74.3
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 1.8e-29 132.5 74 75.7
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 1.8e-29 132.5 74 73.0
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 1.8e-29 132.5 74 73.0
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 2.3e-29 132.1 74 75.7
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 2.3e-29 132.1 74 73.0
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 3.0e-29 131.7 72 76.4
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 3.0e-29 131.7 74 74.3
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 3.0e-29 131.7 74 73.0
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 3.9e-29 131.3 74 71.6
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 5.1e-29 131.0 74 75.7
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 5.1e-29 131.0 74 73.0
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 6.7e-29 130.6 74 74.3
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 6.7e-29 130.6 74 74.3
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 6.7e-29 130.6 74 73.0
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 8.7e-29 130.2 74 71.6
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 8.7e-29 130.2 74 71.6
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 8.7e-29 130.2 74 73.0
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 1.1e-28 129.8 74 74.3
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.5e-28 129.4 74 74.3
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 1.5e-28 129.4 74 71.6
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 1.9e-28 129.0 74 71.6
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 1.9e-28 129.0 74 71.6
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 3.3e-28 128.3 74 71.6
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 3.3e-28 128.3 74 73.0
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 3.3e-28 128.3 74 70.3
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 3.3e-28 128.3 74 70.3
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 4.3e-28 127.9 72 70.8
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 4.3e-28 127.9 74 71.6
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 5.6e-28 127.5 72 73.6
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 5.6e-28 127.5 72 70.8
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 9.6e-28 126.7 74 71.6
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 1.6e-27 125.9 74 70.3
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 1.6e-27 125.9 74 73.0
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 2.1e-27 125.6 74 71.6
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.8e-27 125.2 74 70.3
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 3.7e-27 124.8 74 68.9
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 3.7e-27 124.8 74 68.9
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 3.7e-27 124.8 74 70.3
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 6.2e-27 124.0 77 63.6
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 6.2e-27 124.0 74 70.3
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 6.2e-27 124.0 74 70.3
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 6.2e-27 124.0 74 70.3
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 6.2e-27 124.0 74 70.3
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 6.2e-27 124.0 74 70.3
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 8.1e-27 123.6 94 60.6
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 8.1e-27 123.6 74 70.3
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 1.1e-26 123.2 96 58.3
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.4e-26 122.9 74 68.9
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 1.8e-26 122.5 74 71.6
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 2.4e-26 122.1 74 67.6
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 2.4e-26 122.1 74 66.2
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 3.1e-26 121.7 74 68.9
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 4.0e-26 121.3 74 67.6
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 4.0e-26 121.3 74 68.9
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 5.3e-26 120.9 74 68.9
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 9.0e-26 120.2 77 67.5
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.5e-25 119.4 62 77.4
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 3.4e-25 118.2 74 66.2
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 5.8e-25 117.5 78 65.4
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 7.6e-25 117.1 74 66.2
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 9.9e-25 116.7 76 65.8
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 1.3e-24 116.3 77 64.9
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 2.2e-24 115.5 74 66.2
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 2.9e-24 115.2 72 68.1
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 2.9e-24 115.2 72 68.1
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 2.9e-24 115.2 72 68.1
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 2.9e-24 115.2 72 68.1
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 2.9e-24 115.2 72 68.1
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 2.9e-24 115.2 74 67.6
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 2.9e-24 115.2 60 76.7
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 3.8e-24 114.8 77 63.6
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 3.8e-24 114.8 77 63.6
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 4.9e-24 114.4 72 68.1
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 6.4e-24 114.0 72 68.1
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 8.4e-24 113.6 74 66.2
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 1.1e-23 113.2 77 63.6
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 1.4e-23 112.8 77 64.9
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 7.9e-22 107.1 76 61.8
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 5.1e-21 104.4 62 69.4
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 5.6e-20 100.9 85 54.1
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 1.3e-19 99.8 61 68.9
Psat0s10921g0080 Pisum sativum HOM05D005692 ORTHO05D006953 1.6e-19 99.4 61 67.2
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 1.1e-18 96.7 50 92.0
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 4.0e-18 94.7 50 76.0
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 9.0e-18 93.6 74 54.1
Zm00001eb294300 Zea mays HOM05D005692 ORTHO05D006953 8.7e-13 77.0 61 54.1
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 3.3e-12 75.1 53 56.6
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 1.6e-11 72.8 64 50.0
Pp3c13_20310 Physcomitrium patens HOM05D005692 ORTHO05D006953 2.0e-09 65.9 57 45.6


User provided reference genes

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