Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0352 Ceratophyllum demersum HOM05D005003 ORTHO05D006220 5.9e-55 217.2 106 100.0
CDE03G0282 Ceratophyllum demersum HOM05D005003 ORTHO05D006220 4.3e-37 157.9 83 89.2
Nn1g05355 Nelumbo nucifera HOM05D005003 ORTHO05D006220 5.4e-32 141.0 83 78.3
Aqoxy6G00783 Aquilegia oxysepala HOM05D005003 ORTHO05D006220 9.2e-32 140.2 83 78.3
MD08G1182800 Malus domestica HOM05D005003 ORTHO05D006220 1.6e-31 139.4 83 77.1
PSO210G4886 Papaver somniferum HOM05D005003 ORTHO05D006220 1.6e-31 139.4 83 77.1
PSO447G0231 Papaver somniferum HOM05D005003 ORTHO05D006220 1.6e-31 139.4 83 77.1
Gohir.A06G035800 Gossypium hirsutum HOM05D005003 ORTHO05D006220 2.7e-31 138.7 83 75.9
Gohir.D06G036300 Gossypium hirsutum HOM05D005003 ORTHO05D006220 2.7e-31 138.7 83 75.9
Gorai.010G040300 Gossypium raimondii HOM05D005003 ORTHO05D006220 2.7e-31 138.7 83 75.9
TWI56G0498 Tripterygium wilfordii HOM05D005003 ORTHO05D006220 5.9e-31 137.5 83 74.7
Atru.chr13.1187 Acer truncatum HOM05D005003 ORTHO05D006220 1.0e-30 136.7 83 74.7
Sc01g0000450 Simmondsia chinensis HOM05D005003 ORTHO05D006220 1.0e-30 136.7 83 74.7
COL.COLO4_16399 Corchorus olitorius HOM05D005003 ORTHO05D006220 1.3e-30 136.3 83 74.7
Sed0012063 Sechium edule HOM05D005003 ORTHO05D006220 1.7e-30 136.0 83 74.7
Thecc.08G106800 Theobroma cacao HOM05D005003 ORTHO05D006220 1.7e-30 136.0 83 74.7
Gohir.A02G076300 Gossypium hirsutum HOM05D005003 ORTHO05D006220 2.3e-30 135.6 83 74.7
Lalb_Chr08g0232881 Lupinus albus HOM05D005003 ORTHO05D006220 2.3e-30 135.6 83 74.7
Manes.18G067500 Manihot esculenta HOM05D005003 ORTHO05D006220 2.3e-30 135.6 83 73.5
Os03g0190900 Oryza sativa ssp. japonica HOM05D005003 ORTHO05D006220 2.3e-30 135.6 83 72.3
Eucgr.B00022 Eucalyptus grandis HOM05D005003 ORTHO05D006220 3.0e-30 135.2 83 73.5
Gohir.D02G083500 Gossypium hirsutum HOM05D005003 ORTHO05D006220 3.0e-30 135.2 83 74.7
Gorai.005G094100 Gossypium raimondii HOM05D005003 ORTHO05D006220 3.0e-30 135.2 83 74.7
Lj6g0010535 Lotus japonicus HOM05D005003 ORTHO05D006220 3.0e-30 135.2 83 73.5
QL12p036782 Quercus lobata HOM05D005003 ORTHO05D006220 3.0e-30 135.2 83 73.5
HPP92_027712 Vanilla planifolia HOM05D005003 ORTHO05D006220 3.0e-30 135.2 83 72.3
Ca_02288_v3 Cicer arietinum L. HOM05D005003 ORTHO05D006220 3.9e-30 134.8 83 74.7
Glyma.15G183500 Glycine max HOM05D005003 ORTHO05D006220 3.9e-30 134.8 83 73.5
Nn5g30108 Nelumbo nucifera HOM05D005003 ORTHO05D006220 3.9e-30 134.8 83 74.7
Phvul.009G222900 Phaseolus vulgaris HOM05D005003 ORTHO05D006220 3.9e-30 134.8 83 73.5
arahy.Tifrunner.gnm1.ann1.T3BG7X Arachis hypogaea HOM05D005003 ORTHO05D006220 5.0e-30 134.4 83 72.3
Lalb_Chr11g0073941 Lupinus albus HOM05D005003 ORTHO05D006220 5.0e-30 134.4 83 73.5
MBI05_g37053_MAGBIO Magnolia biondii HOM05D005003 ORTHO05D006220 5.0e-30 134.4 83 73.5
Psat1g137840 Pisum sativum HOM05D005003 ORTHO05D006220 5.0e-30 134.4 82 74.4
TAR625G1506 Trochodendron aralioides HOM05D005003 ORTHO05D006220 5.0e-30 134.4 83 74.7
ATR0782G104 Amborella trichopoda HOM05D005003 ORTHO05D006220 6.6e-30 134.0 83 72.3
Ciclev10003185m.g Citrus clementina HOM05D005003 ORTHO05D006220 6.6e-30 134.0 83 73.5
Duzib116G0723 Durio zibethinus HOM05D005003 ORTHO05D006220 6.6e-30 134.0 83 73.5
Ah.05g169960 Amaranthus hybridus HOM05D005003 ORTHO05D006220 8.6e-30 133.7 84 73.8
CANSAT25G3351 Cannabis sativa HOM05D005003 ORTHO05D006220 8.6e-30 133.7 83 72.3
FvH4_5g37331 Fragaria vesca HOM05D005003 ORTHO05D006220 8.6e-30 133.7 84 76.2
FAN04G0108 Fragaria x ananassa HOM05D005003 ORTHO05D006220 8.6e-30 133.7 84 76.2
FAN13G0908 Fragaria x ananassa HOM05D005003 ORTHO05D006220 8.6e-30 133.7 84 76.2
FAN18G2350 Fragaria x ananassa HOM05D005003 ORTHO05D006220 8.6e-30 133.7 84 76.2
PGR044G0640 Punica granatum HOM05D005003 ORTHO05D006220 8.6e-30 133.7 83 72.3
Medtr2g044600 Medicago truncatula HOM05D005003 ORTHO05D006220 1.1e-29 133.3 82 73.2
EL10Ac1g01213 Beta vulgaris HOM05D005003 ORTHO05D006220 1.5e-29 132.9 84 73.8
Cpa.g.sc36.131 Carica papaya HOM05D005003 ORTHO05D006220 1.5e-29 132.9 82 74.4
AUR62038523 Chenopodium quinoa HOM05D005003 ORTHO05D006220 1.9e-29 132.5 95 68.4
CsaV3_2G029670 Cucumis sativus L. HOM05D005003 ORTHO05D006220 1.9e-29 132.5 83 72.3
Hund16905 Selenicereus undatus HOM05D005003 ORTHO05D006220 1.9e-29 132.5 84 72.6
TPR.G20790 Trifolium pratense HOM05D005003 ORTHO05D006220 1.9e-29 132.5 83 72.3
GSVIVG01009030001 Vitis vinifera HOM05D005003 ORTHO05D006220 1.9e-29 132.5 83 74.7
AUR62027758 Chenopodium quinoa HOM05D005003 ORTHO05D006220 2.5e-29 132.1 84 72.6
Cc10_g07200 Coffea canephora HOM05D005003 ORTHO05D006220 2.5e-29 132.1 82 74.4
Aa31LG6G8500 Aethionema arabicum HOM05D005003 ORTHO05D006220 3.3e-29 131.7 83 73.5
arahy.Tifrunner.gnm1.ann1.DW6FDI Arachis hypogaea HOM05D005003 ORTHO05D006220 3.3e-29 131.7 83 71.1
Cfa013635 Carpinus fangiana HOM05D005003 ORTHO05D006220 3.3e-29 131.7 83 72.3
FAN08G0347 Fragaria x ananassa HOM05D005003 ORTHO05D006220 3.3e-29 131.7 84 75.0
ClCG08G011090 Citrullus lanatus HOM05D005003 ORTHO05D006220 4.3e-29 131.3 83 71.1
Oeu046301.1 Olea europaea HOM05D005003 ORTHO05D006220 5.6e-29 131.0 82 74.4
SEGI_39253 Sequoiadendron giganteum HOM05D005003 ORTHO05D006220 5.6e-29 131.0 82 70.7
VMungo1309G2656 Vigna mungo HOM05D005003 ORTHO05D006220 5.6e-29 131.0 83 69.9
Migut.C00095 Erythranthe guttata HOM05D005003 ORTHO05D006220 7.3e-29 130.6 82 74.4
MBI02_g35765_MAGBIO Magnolia biondii HOM05D005003 ORTHO05D006220 7.3e-29 130.6 83 72.3
Sabra02G0076000 Salix brachista HOM05D005003 ORTHO05D006220 9.5e-29 130.2 82 70.7
vmacro21269 Vaccinium macrocarpon HOM05D005003 ORTHO05D006220 9.5e-29 130.2 82 74.4
Zm00001eb006880 Zea mays HOM05D005003 ORTHO05D006220 9.5e-29 130.2 83 71.1
Potri.002G096500 Populus trichocarpa HOM05D005003 ORTHO05D006220 1.2e-28 129.8 82 70.7
Rhsim06G0082100 Rhododendron simsii HOM05D005003 ORTHO05D006220 1.2e-28 129.8 82 73.2
THA.LOC104816746 Tarenaya hassleriana HOM05D005003 ORTHO05D006220 1.2e-28 129.8 83 72.3
Haze_22267 Corylus avellana HOM05D005003 ORTHO05D006220 1.6e-28 129.4 83 68.7
HanXRQChr11g0327771 Helianthus annuus HOM05D005003 ORTHO05D006220 1.6e-28 129.4 82 72.0
Actinidia10323 Actinidia chinensis HOM05D005003 ORTHO05D006220 2.1e-28 129.0 82 73.2
DCAR_008735 Daucus carota HOM05D005003 ORTHO05D006220 2.1e-28 129.0 83 73.5
Manes.02G152700 Manihot esculenta HOM05D005003 ORTHO05D006220 2.1e-28 129.0 83 71.1
Sp1g29750 Schrenkiella parvula HOM05D005003 ORTHO05D006220 2.8e-28 128.6 83 71.1
Hund26962 Selenicereus undatus HOM05D005003 ORTHO05D006220 2.8e-28 128.6 84 70.2
AL1G49100 Arabidopsis lyrata HOM05D005003 ORTHO05D006220 3.6e-28 128.3 83 71.1
Carub.0001s3263 Capsella rubella HOM05D005003 ORTHO05D006220 3.6e-28 128.3 83 71.1
CARHR033930 Cardamine hirsuta HOM05D005003 ORTHO05D006220 3.6e-28 128.3 83 71.1
Thhalv10001817m.g Eutrema salsugineum HOM05D005003 ORTHO05D006220 3.6e-28 128.3 83 71.1
Hma1.2p1_0575F.1_g181570 Hydrangea macrophylla HOM05D005003 ORTHO05D006220 3.6e-28 128.3 82 70.7
SalBow7G4179 Salvia bowleyana HOM05D005003 ORTHO05D006220 3.6e-28 128.3 82 72.0
CSS0024644 Camellia sinensis var. sinensis HOM05D005003 ORTHO05D006220 4.7e-28 127.9 82 70.7
Dinv44775 Davidia involucrata HOM05D005003 ORTHO05D006220 4.7e-28 127.9 82 70.7
Gohir.A05G226300 Gossypium hirsutum HOM05D005003 ORTHO05D006220 6.2e-28 127.5 83 68.7
Solyc04g074140.4 Solanum lycopersicum HOM05D005003 ORTHO05D006220 6.2e-28 127.5 82 69.5
Sopen04g029320 Solanum pennellii HOM05D005003 ORTHO05D006220 6.2e-28 127.5 82 69.5
MSTRG.24973 Avicennia marina HOM05D005003 ORTHO05D006220 1.4e-27 126.3 82 69.5
ECA246G4896 Erigeron canadensis HOM05D005003 ORTHO05D006220 1.4e-27 126.3 82 69.5
Gorai.009G237000 Gossypium raimondii HOM05D005003 ORTHO05D006220 1.8e-27 125.9 83 67.5
AT1G34630 Arabidopsis thaliana HOM05D005003 ORTHO05D006220 2.3e-27 125.6 83 68.7
SGA_v2.0_scaffold729G53525 Striga asiatica HOM05D005003 ORTHO05D006220 2.3e-27 125.6 82 69.5
BcaC05g27758 Brassica carinata HOM05D005003 ORTHO05D006220 3.1e-27 125.2 83 71.1
C05p37520 Brassica napus HOM05D005003 ORTHO05D006220 3.1e-27 125.2 83 71.1
CAN.G101.26 Capsicum annuum HOM05D005003 ORTHO05D006220 4.0e-27 124.8 82 67.1
PGSC0003DMG400006406 Solanum tuberosum HOM05D005003 ORTHO05D006220 4.0e-27 124.8 82 68.3
Gohir.D05G229033 Gossypium hirsutum HOM05D005003 ORTHO05D006220 5.2e-27 124.4 83 67.5
Lsat_1_v5_gn_6_103020 Lactuca sativa HOM05D005003 ORTHO05D006220 5.2e-27 124.4 81 69.1
BcaB03g13676 Brassica carinata HOM05D005003 ORTHO05D006220 6.8e-27 124.0 83 69.9
A05p23910 Brassica napus HOM05D005003 ORTHO05D006220 6.8e-27 124.0 83 69.9
BolC5t32493H Brassica oleracea HOM05D005003 ORTHO05D006220 6.8e-27 124.0 83 69.9
BraA05t21269Z Brassica rapa HOM05D005003 ORTHO05D006220 6.8e-27 124.0 83 69.9
Nitab4.5_0000232g0240 Nicotiana tabacum HOM05D005003 ORTHO05D006220 6.8e-27 124.0 82 68.3
Nitab4.5_0005777g0050 Nicotiana tabacum HOM05D005003 ORTHO05D006220 6.8e-27 124.0 82 68.3
Lj4A723T22 Lonicera japonica HOM05D005003 ORTHO05D006220 8.9e-27 123.6 82 69.5
Peaxi162Scf00041g01737 Petunia axillaris HOM05D005003 ORTHO05D006220 1.2e-26 123.2 82 68.3
A09p32030 Brassica napus HOM05D005003 ORTHO05D006220 3.4e-26 121.7 83 68.7
BraA09t38740Z Brassica rapa HOM05D005003 ORTHO05D006220 3.4e-26 121.7 83 68.7
unitig_37.g12958 Utricularia gibba HOM05D005003 ORTHO05D006220 1.3e-25 119.8 82 64.6
unitig_37.g12957 Utricularia gibba HOM05D005003 ORTHO05D006220 1.7e-25 119.4 82 64.6
BcaC08g43771 Brassica carinata HOM05D005003 ORTHO05D006220 2.9e-25 118.6 82 68.3
C06p11460 Brassica napus HOM05D005003 ORTHO05D006220 2.9e-25 118.6 82 68.3
BolC6t36281H Brassica oleracea HOM05D005003 ORTHO05D006220 2.9e-25 118.6 82 68.3
BcaB07g33109 Brassica carinata HOM05D005003 ORTHO05D006220 3.7e-25 118.2 82 67.1
Lj4A102G54 Lonicera japonica HOM05D005003 ORTHO05D006220 4.9e-25 117.9 82 64.6
Pp3c21_12240 Physcomitrium patens HOM05D005003 ORTHO05D006220 1.7e-22 109.4 84 58.3
Mapoly0082s0089 Marchantia polymorpha HOM05D005003 ORTHO05D006220 3.0e-22 108.6 84 58.3
SMO367G0178 Selaginella moellendorffii HOM05D005003 ORTHO05D006220 4.3e-21 104.8 84 59.5
MCO11G769 Micromonas commoda HOM05D005003 ORTHO05D006220 1.0e-14 83.6 81 48.1
PRCOL_00001883 Prasinoderma coloniale HOM05D005003 ORTHO05D006220 2.1e-12 75.9 83 41.0
PRCOL_00001303 Prasinoderma coloniale HOM05D005003 ORTHO05D006220 8.4e-09 63.9 101 32.7
MD15G1369200 Malus domestica HOM05D005003 ORTHO05D006220 7.8e-07 57.4 83 43.4
Potri.005G165100 Populus trichocarpa HOM05D005003 ORTHO05D006220 1.3e-06 56.6 49 61.2
RcHm_v2.0_Chr7g0238981 Rosa chinensis HOM05D005003 ORTHO05D006220 3.9e-06 55.1 37 70.3


User provided reference genes

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