Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 0.0e+00 1075.8 567 100.0
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 1.1e-33 149.1 182 46.7
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 8.9e-33 146.0 349 32.1
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 1.5e-32 145.2 353 33.1
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 2.0e-32 144.8 141 51.8
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 2.2e-31 141.4 340 32.9
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 1.1e-30 139.0 350 32.0
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 1.1e-30 139.0 133 51.1
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 1.1e-30 139.0 152 47.4
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 1.4e-30 138.7 186 43.0
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 3.2e-30 137.5 171 43.3
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 5.4e-30 136.7 134 52.2
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.2e-29 135.6 465 28.8
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 1.2e-29 135.6 141 48.2
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 1.6e-29 135.2 170 44.1
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 1.6e-29 135.2 136 49.3
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 3.5e-29 134.0 133 50.4
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 3.5e-29 134.0 140 47.9
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 6.0e-29 133.3 469 29.6
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 7.8e-29 132.9 220 39.5
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.0e-28 132.5 161 42.9
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 1.0e-28 132.5 481 28.7
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.3e-28 132.1 170 43.5
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 1.7e-28 131.7 368 31.2
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 3.0e-28 131.0 217 37.8
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 8.7e-28 129.4 341 32.0
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.1e-27 129.0 152 42.8
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 1.5e-27 128.6 133 47.4
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 1.9e-27 128.3 467 28.1
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 2.5e-27 127.9 135 48.9
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 2.5e-27 127.9 138 47.1
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 2.5e-27 127.9 139 46.8
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 3.3e-27 127.5 497 27.6
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 3.3e-27 127.5 157 44.6
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 4.3e-27 127.1 173 42.8
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 4.3e-27 127.1 348 30.7
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 5.6e-27 126.7 138 50.0
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 5.6e-27 126.7 138 50.0
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 1.3e-26 125.6 131 45.0
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 1.6e-26 125.2 130 46.9
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 2.1e-26 124.8 391 28.9
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 2.1e-26 124.8 391 28.1
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 2.1e-26 124.8 105 54.3
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 2.8e-26 124.4 258 34.1
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 3.6e-26 124.0 133 45.9
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 6.2e-26 123.2 146 43.2
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 6.2e-26 123.2 433 27.0
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 6.2e-26 123.2 489 27.2
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 6.2e-26 123.2 134 45.5
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 1.1e-25 122.5 137 43.1
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 1.1e-25 122.5 233 33.0
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 1.8e-25 121.7 363 29.2
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 2.4e-25 121.3 149 45.0
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 3.1e-25 120.9 137 43.1
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 3.1e-25 120.9 395 28.6
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 4.0e-25 120.6 348 29.6
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 4.0e-25 120.6 113 47.8
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 5.3e-25 120.2 131 44.3
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.2e-24 119.0 136 43.4
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 1.2e-24 119.0 136 43.4
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.5e-24 118.6 122 50.8
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 2.0e-24 118.2 208 36.1
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 2.0e-24 118.2 135 46.7
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 2.0e-24 118.2 355 28.5
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 7.6e-24 116.3 120 50.0
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 3.8e-23 114.0 223 34.5
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 3.8e-23 114.0 163 37.4
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 8.4e-23 112.8 475 25.9
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 1.4e-22 112.1 214 32.7
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 1.9e-22 111.7 390 26.4
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 3.2e-22 110.9 405 29.4
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 1.6e-21 108.6 160 38.8
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 3.5e-21 107.5 355 29.6
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 3.5e-21 107.5 201 35.8
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 2.3e-20 104.8 236 29.7
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 2.3e-20 104.8 517 26.9
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 1.5e-19 102.1 495 23.6
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 1.9e-19 101.7 430 26.3
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 2.1e-18 98.2 161 31.7
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 2.1e-18 98.2 433 26.3
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 2.8e-18 97.8 180 34.4
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 3.6e-18 97.4 148 38.5
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 6.2e-18 96.7 173 32.4
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 1.1e-17 95.9 132 35.6
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 1.8e-17 95.1 216 29.2
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 1.8e-17 95.1 549 22.6
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 2.4e-17 94.7 216 29.2
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 3.1e-17 94.4 216 29.6
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 4.5e-16 90.5 487 23.4
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 7.6e-16 89.7 125 35.2
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 7.6e-16 89.7 345 26.4
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 7.6e-16 89.7 196 28.6
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 2.2e-15 88.2 540 23.7
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 4.9e-15 87.0 166 31.9
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 4.9e-15 87.0 166 31.9
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 2.7e-13 81.3 285 25.3
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 2.7e-13 81.3 179 28.5
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 1.0e-12 79.3 83 42.2
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 6.7e-12 76.6 126 32.5
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 1.1e-11 75.9 128 32.8
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 1.9e-11 75.1 141 31.9
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 5.6e-11 73.6 100 38.0
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 3.7e-10 70.9 352 23.9
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 1.5e-08 65.5 312 24.4
AUR62033982 Chenopodium quinoa HOM05D006771 ORTHO05D008296 2.2e-07 61.6 48 56.2
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 2.2e-07 61.6 74 44.6
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 3.8e-07 60.8 102 34.3
SEGI_24756 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 1.1e-06 59.3 135 28.9


User provided reference genes

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