Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0266 Ceratophyllum demersum HOM05D000030 ORTHO05D009563 3.1e-37 157.9 77 100.0
Nn4g23693 Nelumbo nucifera HOM05D000030 ORTHO05D009563 1.1e-26 122.9 67 88.1
Actinidia31034 Actinidia chinensis HOM05D005660 ORTHO05D009563 1.2e-25 119.4 67 85.1
CSS0033246 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D009563 1.6e-25 119.0 67 85.1
CiPaw.15G125300 Carya illinoinensis HOM05D000030 ORTHO05D009563 2.1e-25 118.6 67 83.6
Ciclev10019100m.g Citrus clementina HOM05D000030 ORTHO05D009563 2.7e-25 118.2 67 83.6
TWI15G1164 Tripterygium wilfordii HOM05D000030 ORTHO05D009563 2.7e-25 118.2 67 83.6
Atru.chr9.734 Acer truncatum HOM05D000030 ORTHO05D009563 4.6e-25 117.5 67 82.1
GSVIVG01008224001 Vitis vinifera HOM05D000030 ORTHO05D009563 6.0e-25 117.1 67 83.6
TWI81G0331 Tripterygium wilfordii HOM05D000030 ORTHO05D009563 1.0e-24 116.3 67 82.1
Duzib068G1203 Durio zibethinus HOM05D000030 ORTHO05D009563 1.8e-24 115.5 67 80.6
RhsimUnG0106400 Rhododendron simsii HOM05D000030 ORTHO05D009563 3.0e-24 114.8 67 80.6
ATR0598G059 Amborella trichopoda HOM05D000030 ORTHO05D009563 3.9e-24 114.4 67 80.6
Thecc.03G027200 Theobroma cacao HOM05D000030 ORTHO05D009563 5.1e-24 114.0 67 79.1
Dinv36894 Davidia involucrata HOM05D000030 ORTHO05D009563 6.7e-24 113.6 67 82.1
Actinidia39804 Actinidia chinensis HOM05D000030 ORTHO05D009563 8.7e-24 113.2 67 80.6
vmacro17683 Vaccinium macrocarpon HOM05D000030 ORTHO05D009563 8.7e-24 113.2 67 80.6
CiPaw.16G083300 Carya illinoinensis HOM05D000030 ORTHO05D009563 1.1e-23 112.8 67 79.1
Haze_18591 Corylus avellana HOM05D000030 ORTHO05D009563 1.5e-23 112.5 67 79.1
Haze_18592 Corylus avellana HOM05D000030 ORTHO05D009563 1.5e-23 112.5 67 79.1
MBI16_g23749_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D009563 1.5e-23 112.5 67 80.6
COL.COLO4_22696 Corchorus olitorius HOM05D000030 ORTHO05D009563 2.5e-23 111.7 65 80.0
MD06G1210000 Malus domestica HOM05D000030 ORTHO05D009563 5.7e-23 110.5 67 77.6
QL10p023146 Quercus lobata HOM05D000030 ORTHO05D009563 7.4e-23 110.2 69 78.3
ClCG02G014930 Citrullus lanatus HOM05D000030 ORTHO05D009563 1.3e-22 109.4 67 77.6
PSO063G1480 Papaver somniferum HOM05D000030 ORTHO05D009563 1.6e-22 109.0 65 80.0
Duzib084G1399 Durio zibethinus HOM05D000030 ORTHO05D009563 2.1e-22 108.6 67 74.6
Gohir.A11G007550 Gossypium hirsutum HOM05D000030 ORTHO05D009563 2.8e-22 108.2 67 76.1
Gohir.D11G008433 Gossypium hirsutum HOM05D000030 ORTHO05D009563 2.8e-22 108.2 67 76.1
Gorai.007G008000 Gossypium raimondii HOM05D000030 ORTHO05D009563 2.8e-22 108.2 67 76.1
CANSAT80G1142 Cannabis sativa HOM05D000030 ORTHO05D009563 6.3e-22 107.1 69 79.7
Cpa.g.sc13.59 Carica papaya HOM05D000030 ORTHO05D009563 8.2e-22 106.7 67 79.1
Lj9C432T16 Lonicera japonica HOM05D000030 ORTHO05D009563 1.1e-21 106.3 69 73.9
MELO3C031531.2 Cucumis melo HOM05D000030 ORTHO05D009563 1.4e-21 105.9 71 71.8
Prupe.5G216200 Prunus persica HOM05D000030 ORTHO05D009563 1.8e-21 105.5 67 74.6
RcHm_v2.0_Chr7g0184431 Rosa chinensis HOM05D000030 ORTHO05D009563 3.1e-21 104.8 70 74.3
Sed0016338 Sechium edule HOM05D000030 ORTHO05D009563 4.1e-21 104.4 67 74.6
MSTRG.9564 Avicennia marina HOM05D000030 ORTHO05D009563 9.0e-21 103.2 67 74.6
Potri.012G059200 Populus trichocarpa HOM05D000030 ORTHO05D009563 9.0e-21 103.2 67 74.6
Cc04_g07610 Coffea canephora HOM05D000030 ORTHO05D009563 1.5e-20 102.4 67 73.1
Sabra12G0040700 Salix brachista HOM05D000030 ORTHO05D009563 1.5e-20 102.4 67 76.1
Manes.05G118100 Manihot esculenta HOM05D000030 ORTHO05D009563 2.6e-20 101.7 67 74.6
Hund09994 Selenicereus undatus HOM05D000030 ORTHO05D009563 4.5e-20 100.9 67 70.1
CsaV3_2G007070 Cucumis sativus L. HOM05D000030 ORTHO05D009563 7.6e-20 100.1 67 70.1
Nitab4.5_0000410g0150 Nicotiana tabacum HOM05D000030 ORTHO05D009563 1.0e-19 99.8 63 69.8
SGA_v2.0_scaffold168G38477 Striga asiatica HOM05D000030 ORTHO05D009563 1.3e-19 99.4 67 71.6
Lj4g0007233 Lotus japonicus HOM05D000030 ORTHO05D009563 1.7e-19 99.0 67 68.7
Migut.D01584 Erythranthe guttata HOM05D000030 ORTHO05D009563 2.2e-19 98.6 67 71.6
FvH4_5g12801 Fragaria vesca HOM05D000030 ORTHO05D009563 2.9e-19 98.2 69 75.4
Peaxi162Scf00015g00634 Petunia axillaris HOM05D000030 ORTHO05D009563 5.0e-19 97.4 63 68.3
Glyma.05G013900 Glycine max HOM05D000030 ORTHO05D009563 6.5e-19 97.1 67 65.7
AUR62032181 Chenopodium quinoa HOM05D000030 ORTHO05D009563 1.1e-18 96.3 67 67.2
Glyma.17G122200 Glycine max HOM05D000030 ORTHO05D009563 1.1e-18 96.3 67 65.7
PGR083G1920 Punica granatum HOM05D000030 ORTHO05D009563 1.1e-18 96.3 67 67.2
Sp1g16510 Schrenkiella parvula HOM05D000030 ORTHO05D009563 1.1e-18 96.3 67 70.1
Nitab4.5_0003716g0090 Nicotiana tabacum HOM05D000030 ORTHO05D009563 1.4e-18 95.9 63 69.8
VMungo1215G2945 Vigna mungo HOM05D000030 ORTHO05D009563 1.4e-18 95.9 67 65.7
Ca_02531_v3 Cicer arietinum L. HOM05D000030 ORTHO05D009563 3.2e-18 94.7 66 65.2
Lsat_1_v5_gn_5_24240 Lactuca sativa HOM05D000030 ORTHO05D009563 5.5e-18 94.0 67 64.2
MD14G1220900 Malus domestica HOM05D000030 ORTHO05D009563 5.5e-18 94.0 65 69.2
AL1G31000 Arabidopsis lyrata HOM05D000030 ORTHO05D000031 7.2e-18 93.6 67 68.7
AT1G18560 Arabidopsis thaliana HOM05D000030 ORTHO05D009563 7.2e-18 93.6 67 68.7
AUR62036941 Chenopodium quinoa HOM05D000030 ORTHO05D009563 1.2e-17 92.8 67 64.2
Thhalv10006990m.g Eutrema salsugineum HOM05D000030 ORTHO05D009563 1.2e-17 92.8 67 67.2
Lalb_Chr13g0302391 Lupinus albus HOM05D000030 ORTHO05D009563 1.2e-17 92.8 67 64.2
Psat5g107360 Pisum sativum HOM05D000030 ORTHO05D000031 2.7e-17 91.7 67 61.2
Aa31LG7G3250 Aethionema arabicum HOM05D000030 ORTHO05D009563 3.6e-17 91.3 67 67.2
Carub.0001s1819 Capsella rubella HOM05D000030 ORTHO05D009563 3.6e-17 91.3 67 65.7
Eucgr.B00689 Eucalyptus grandis HOM05D000030 ORTHO05D009563 4.6e-17 90.9 67 65.7
CARHR019180 Cardamine hirsuta HOM05D000030 ORTHO05D009563 7.9e-17 90.1 67 65.7
EL10Ac5g11242 Beta vulgaris HOM05D000030 ORTHO05D009563 1.0e-16 89.7 66 63.6
ECA246G2413 Erigeron canadensis HOM05D000030 ORTHO05D009563 1.8e-16 89.0 68 64.7
THA.LOC104812116 Tarenaya hassleriana HOM05D000030 ORTHO05D009563 1.8e-16 89.0 67 64.2
Aqoxy3G03880 Aquilegia oxysepala HOM05D000030 ORTHO05D009563 5.1e-16 87.4 67 64.2
TPR.G26769 Trifolium pratense HOM05D000030 ORTHO05D009563 8.7e-16 86.7 61 68.9
HanXRQChr05g0157751 Helianthus annuus HOM05D000030 ORTHO05D009563 2.5e-15 85.1 67 61.2
Sopen03g038690 Solanum pennellii HOM05D000030 ORTHO05D009563 7.4e-15 83.6 64 65.6
A09p59880 Brassica napus HOM05D000030 ORTHO05D009563 9.7e-15 83.2 70 60.0
BraA09t41360Z Brassica rapa HOM05D000030 ORTHO05D009563 9.7e-15 83.2 70 60.0
PGSC0003DMG400005619 Solanum tuberosum HOM05D000030 ORTHO05D009563 2.8e-14 81.6 64 64.1
Lj9C216T3 Lonicera japonica HOM05D000030 ORTHO05D000031 8.2e-14 80.1 68 60.3
Solyc03g119830.4 Solanum lycopersicum HOM05D000030 ORTHO05D009563 1.1e-13 79.7 59 67.8
C08p43280 Brassica napus HOM05D000030 ORTHO05D009563 1.4e-13 79.3 68 60.3
BolC8t51878H Brassica oleracea HOM05D000030 ORTHO05D009563 1.4e-13 79.3 68 60.3
BraA10t44668Z Brassica rapa HOM05D000030 ORTHO05D009563 4.1e-13 77.8 60 63.3
Os01g0111400 Oryza sativa ssp. japonica HOM05D000030 ORTHO05D009563 9.1e-13 76.6 67 53.7
ATR0564G191 Amborella trichopoda HOM05D000030 ORTHO05D009563 2.3e-08 62.0 59 57.6
BolC5t32459H Brassica oleracea HOM05D003212 ORTHO05D017537 1.1e-07 59.7 33 78.8
PSO421G0305 Papaver somniferum HOM05D000030 ORTHO05D009563 4.4e-07 57.8 29 86.2
PSO063G2153 Papaver somniferum HOM05D000030 ORTHO05D009563 2.8e-06 55.1 27 88.9
PSO063G2643 Papaver somniferum HOM05D000030 ORTHO05D009563 2.8e-06 55.1 27 88.9


User provided reference genes

Program Settings