Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0261 Ceratophyllum demersum HOM05D005552 ORTHO05D006743 1.9e-253 878.6 437 100.0
CDE04G2042 Ceratophyllum demersum HOM05D005552 ORTHO05D006743 6.1e-207 724.2 459 82.1
COL.COLO4_11363 Corchorus olitorius HOM05D005552 ORTHO05D006743 3.9e-137 492.3 460 55.0
Thecc.01G050800 Theobroma cacao HOM05D005552 ORTHO05D006743 1.3e-135 487.3 460 52.8
GSVIVG01003549001 Vitis vinifera HOM05D005552 ORTHO05D006743 6.3e-135 485.0 462 53.7
Gohir.D11G196500 Gossypium hirsutum HOM05D005552 ORTHO05D006743 9.0e-134 481.1 460 53.7
Gorai.007G210400 Gossypium raimondii HOM05D005552 ORTHO05D006743 2.6e-133 479.6 460 53.7
vmacro21371 Vaccinium macrocarpon HOM05D005552 ORTHO05D006743 3.4e-133 479.2 460 52.6
PSO675G7200 Papaver somniferum HOM05D005552 ORTHO05D006743 5.9e-133 478.4 456 55.5
PSO541G0461 Papaver somniferum HOM05D005552 ORTHO05D006743 1.0e-132 477.6 456 55.0
Aqoxy6G00889 Aquilegia oxysepala HOM05D005552 ORTHO05D006743 5.0e-132 475.3 456 55.0
Cc02_g34610 Coffea canephora HOM05D005552 ORTHO05D006743 7.2e-131 471.5 463 53.1
Cpa.g.sc6.396 Carica papaya HOM05D005552 ORTHO05D006743 2.1e-130 469.9 457 54.3
Dinv39890 Davidia involucrata HOM05D005552 ORTHO05D006743 1.0e-129 467.6 461 52.5
FAN28G0665 Fragaria x ananassa HOM05D005552 ORTHO05D006743 6.7e-129 464.9 463 53.6
MD15G1279300 Malus domestica HOM05D005552 ORTHO05D006743 1.5e-128 463.8 467 52.0
Ciclev10025258m.g Citrus clementina HOM05D005552 ORTHO05D006743 4.3e-128 462.2 461 51.6
Duzib264G1173 Durio zibethinus HOM05D005552 ORTHO05D006743 4.3e-128 462.2 464 51.9
FAN26G2590 Fragaria x ananassa HOM05D005552 ORTHO05D006743 4.3e-128 462.2 463 53.6
CsaV3_6G043060 Cucumis sativus L. HOM05D005552 ORTHO05D006743 7.4e-128 461.5 460 53.5
FAN19G0212 Fragaria x ananassa HOM05D005552 ORTHO05D006743 6.3e-127 458.4 463 52.9
MELO3C007542.2 Cucumis melo HOM05D005552 ORTHO05D006743 1.1e-126 457.6 434 54.1
CAN.G1273.15 Capsicum annuum HOM05D005552 ORTHO05D006743 1.4e-126 457.2 461 52.7
FvH4_1g15480 Fragaria vesca HOM05D005552 ORTHO05D006743 1.4e-126 457.2 463 52.9
Actinidia12065 Actinidia chinensis HOM05D005552 ORTHO05D006743 2.4e-126 456.4 463 51.8
Cfa003976 Carpinus fangiana HOM05D005552 ORTHO05D006743 2.4e-126 456.4 463 52.7
Solyc01g100190.4 Solanum lycopersicum HOM05D005552 ORTHO05D006743 2.4e-126 456.4 463 52.7
CiPaw.01G023200 Carya illinoinensis HOM05D005552 ORTHO05D006743 3.1e-126 456.1 465 52.3
Haze_15444 Corylus avellana HOM05D005552 ORTHO05D006743 3.1e-126 456.1 472 51.3
ATR0767G265 Amborella trichopoda HOM05D005552 ORTHO05D006743 4.1e-126 455.7 465 54.0
Sopen01g043680 Solanum pennellii HOM05D005552 ORTHO05D006743 6.9e-126 454.9 462 52.2
Sopen01g043710 Solanum pennellii HOM05D005552 ORTHO05D006743 6.9e-126 454.9 462 52.2
Hund16313 Selenicereus undatus HOM05D005552 ORTHO05D006743 9.1e-126 454.5 457 52.7
Manes.16G089500 Manihot esculenta HOM05D005552 ORTHO05D006743 1.5e-125 453.8 463 52.5
Potri.001G361900 Populus trichocarpa HOM05D005552 ORTHO05D006743 2.6e-125 453.0 461 51.8
Prupe.7G138000 Prunus persica HOM05D005552 ORTHO05D006743 3.4e-125 452.6 462 52.6
Oeu020899.1 Olea europaea HOM05D005552 ORTHO05D006743 7.7e-125 451.4 459 52.1
ClCG01G016650 Citrullus lanatus HOM05D005552 ORTHO05D006743 1.7e-124 450.3 462 51.3
PGSC0003DMG400024733 Solanum tuberosum HOM05D005552 ORTHO05D006743 5.0e-124 448.7 461 51.8
CANSAT64G0631 Cannabis sativa HOM05D005552 ORTHO05D006743 4.2e-123 445.7 459 51.6
CSS0032711 Camellia sinensis var. sinensis HOM05D005552 ORTHO05D006743 1.2e-122 444.1 442 52.0
RcHm_v2.0_Chr2g0104711 Rosa chinensis HOM05D005552 ORTHO05D006743 1.2e-122 444.1 463 51.6
Sed0018600 Sechium edule HOM05D005552 ORTHO05D006743 4.7e-122 442.2 459 51.0
Nitab4.5_0000368g0430 Nicotiana tabacum HOM05D005552 ORTHO05D006743 1.0e-121 441.0 491 48.9
ECA232G0422 Erigeron canadensis HOM05D005552 ORTHO05D006743 3.9e-121 439.1 462 51.3
MSTRG.5133 Avicennia marina HOM05D005552 ORTHO05D006743 5.1e-121 438.7 462 50.9
Lj6g0016933 Lotus japonicus HOM05D005552 ORTHO05D006743 5.1e-121 438.7 461 51.2
AUR62001963 Chenopodium quinoa HOM05D005552 ORTHO05D006743 6.7e-121 438.3 456 50.4
AUR62003843 Chenopodium quinoa HOM05D005552 ORTHO05D006743 6.7e-121 438.3 457 50.8
Sc16g0001610 Simmondsia chinensis HOM05D005552 ORTHO05D006743 8.8e-121 438.0 458 50.9
THA.LOC104807572 Tarenaya hassleriana HOM05D005552 ORTHO05D006743 1.1e-120 437.6 456 50.7
Lj2g0010083 Lotus japonicus HOM05D005552 ORTHO05D006743 2.0e-120 436.8 462 50.4
arahy.Tifrunner.gnm1.ann1.A2BBUY Arachis hypogaea HOM05D005552 ORTHO05D006743 2.6e-120 436.4 463 50.3
Rhsim01G0119100 Rhododendron simsii HOM05D005552 ORTHO05D006743 3.3e-120 436.0 461 49.5
Hma1.2p1_0873F.1_g231280 Hydrangea macrophylla HOM05D005552 ORTHO05D006743 4.4e-120 435.6 456 49.8
arahy.Tifrunner.gnm1.ann1.21BGDZ Arachis hypogaea HOM05D005552 ORTHO05D006743 5.7e-120 435.3 460 50.0
QL06p042750 Quercus lobata HOM05D005552 ORTHO05D006743 7.4e-120 434.9 461 49.7
TWI09G0520 Tripterygium wilfordii HOM05D005552 ORTHO05D006743 9.7e-120 434.5 460 50.0
Glyma.01G183800 Glycine max HOM05D005552 ORTHO05D006743 1.3e-119 434.1 460 50.4
Lj4C139G4 Lonicera japonica HOM05D005552 ORTHO05D006743 1.7e-119 433.7 462 50.2
SGA_v2.0_scaffold36G14364 Striga asiatica HOM05D005552 ORTHO05D006743 2.2e-119 433.3 466 50.9
Peaxi162Scf00073g00015 Petunia axillaris HOM05D005552 ORTHO05D006743 2.8e-119 433.0 461 50.3
Hma1.2p1_0873F.1_g231290 Hydrangea macrophylla HOM05D005552 ORTHO05D006743 6.3e-119 431.8 429 51.0
TPR.G11337 Trifolium pratense HOM05D005552 ORTHO05D006743 1.1e-118 431.0 456 51.5
Ca_24792_v3 Cicer arietinum L. HOM05D005552 ORTHO05D006743 1.8e-118 430.3 462 50.9
Nitab4.5_0002715g0120 Nicotiana tabacum HOM05D005552 ORTHO05D006743 7.0e-118 428.3 492 48.6
AT4G37190 Arabidopsis thaliana HOM05D005552 ORTHO05D006743 2.0e-117 426.8 454 51.1
Aa31LG6G13810 Aethionema arabicum HOM05D005552 ORTHO05D006743 2.6e-117 426.4 456 50.2
Eucgr.I00976 Eucalyptus grandis HOM05D005552 ORTHO05D006743 2.6e-117 426.4 459 49.5
Glyma.11G058500 Glycine max HOM05D005552 ORTHO05D006743 5.9e-117 425.2 460 50.4
Os03g0240900 Oryza sativa ssp. japonica HOM05D005552 ORTHO05D006743 5.9e-117 425.2 457 48.8
Carub.0007s0338 Capsella rubella HOM05D005552 ORTHO05D006743 7.7e-117 424.9 455 51.4
AL7G13990 Arabidopsis lyrata HOM05D005552 ORTHO05D006743 1.0e-116 424.5 454 50.7
PGR119G0642 Punica granatum HOM05D005552 ORTHO05D006743 1.0e-116 424.5 456 49.3
MD02G1166800 Malus domestica HOM05D005552 ORTHO05D006743 2.2e-116 423.3 460 48.9
Phvul.002G021300 Phaseolus vulgaris HOM05D005552 ORTHO05D006743 2.2e-116 423.3 460 49.3
Sp7g34600 Schrenkiella parvula HOM05D005552 ORTHO05D006743 2.2e-116 423.3 455 51.0
CARHR245320 Cardamine hirsuta HOM05D005552 ORTHO05D006743 5.0e-116 422.2 456 50.7
VMungo1215G1500 Vigna mungo HOM05D005552 ORTHO05D006743 5.0e-116 422.2 462 50.2
Psat2g165040 Pisum sativum HOM05D005552 ORTHO05D006743 1.1e-115 421.0 463 50.5
Lalb_Chr05g0213171 Lupinus albus HOM05D005552 ORTHO05D006743 3.2e-115 419.5 459 49.2
Medtr5g017970 Medicago truncatula HOM05D005552 ORTHO05D006743 3.6e-114 416.0 457 51.2
HanXRQChr14g0430701 Helianthus annuus HOM05D005552 ORTHO05D006743 1.0e-113 414.5 460 47.6
Lsat_1_v5_gn_4_168700 Lactuca sativa HOM05D005552 ORTHO05D006743 3.0e-113 412.9 462 47.0
HPP92_017765 Vanilla planifolia HOM05D005552 ORTHO05D006743 3.9e-113 412.5 460 46.1
Zm00001eb030410 Zea mays HOM05D005552 ORTHO05D006743 1.1e-110 404.4 457 47.5
Oeu035482.1 Olea europaea HOM05D005552 ORTHO05D006743 4.1e-110 402.5 390 54.1
BcaNung03946 Brassica carinata HOM05D005552 ORTHO05D006743 9.1e-110 401.4 444 49.3
Thhalv10024834m.g Eutrema salsugineum HOM05D005552 ORTHO05D006743 3.0e-105 386.3 457 47.7
BcaNung04273 Brassica carinata HOM05D005552 ORTHO05D006743 2.0e-104 383.6 446 48.4
FvH4_5g33502 Fragaria vesca HOM05D005552 ORTHO05D006743 2.6e-104 383.3 374 54.8
C07p62120 Brassica napus HOM05D005552 ORTHO05D006743 5.7e-104 382.1 446 47.8
BolC7t46629H Brassica oleracea HOM05D005552 ORTHO05D006743 5.7e-104 382.1 446 47.8
DCAR_010923 Daucus carota HOM05D005552 ORTHO05D006743 1.3e-103 380.9 555 40.0
SEGI_18564 Sequoiadendron giganteum HOM05D005552 ORTHO05D006743 1.7e-103 380.6 462 45.5
A03p64710 Brassica napus HOM05D005552 ORTHO05D006743 2.4e-102 376.7 448 48.9
BraA03t15535Z Brassica rapa HOM05D005552 ORTHO05D006743 2.4e-102 376.7 448 48.9
FAN18G3771 Fragaria x ananassa HOM05D005552 ORTHO05D006743 2.4e-94 350.1 364 52.2
Os12g0586400 Oryza sativa ssp. japonica HOM05D005552 ORTHO05D006743 1.7e-92 344.0 438 43.4
TAR628G0695 Trochodendron aralioides HOM05D005552 ORTHO05D006743 2.7e-85 320.1 315 52.4
Nn6g32078 Nelumbo nucifera HOM05D005552 ORTHO05D006743 2.5e-83 313.5 285 54.7
TAR376G0305 Trochodendron aralioides HOM05D005552 ORTHO05D006743 4.9e-79 299.3 368 47.0
Mapoly0024s0139 Marchantia polymorpha HOM05D005552 ORTHO05D006743 1.1e-75 288.1 450 37.8
Pp3c2_14950 Physcomitrium patens HOM05D005552 ORTHO05D006743 1.5e-75 287.7 457 35.4
Gohir.A11G189700 Gossypium hirsutum HOM05D005552 ORTHO05D006743 1.1e-73 281.6 257 53.3
SMO358G0218 Selaginella moellendorffii HOM05D005552 ORTHO05D006743 1.3e-63 248.1 422 36.5
FAN08G3227 Fragaria x ananassa HOM05D005552 ORTHO05D006743 2.9e-63 246.9 251 53.0
Atru.chr3.424 Acer truncatum HOM05D005552 ORTHO05D006743 4.9e-55 219.5 239 47.7
unitig_26.g9473 Utricularia gibba HOM05D005552 ORTHO05D006743 1.6e-50 204.5 244 46.3
HanXRQChr04g0119851 Helianthus annuus HOM05D005552 ORTHO05D006743 4.0e-49 199.9 178 57.3
CBR_g38209 Chara braunii HOM05D005552 ORTHO05D006743 1.6e-42 177.9 483 28.8
HanXRQChr04g0119841 Helianthus annuus HOM05D005552 ORTHO05D006743 1.1e-41 175.3 185 47.0
Atru.chr2.470 Acer truncatum HOM05D005552 ORTHO05D006743 8.1e-34 149.1 152 52.0
Atru.chr3.423 Acer truncatum HOM05D005552 ORTHO05D006743 4.0e-33 146.7 162 48.1
SHI23011 Sapria himalayana HOM05D005552 ORTHO05D006743 9.6e-27 125.6 174 39.7
arahy.Tifrunner.gnm1.ann1.S73BBB Arachis hypogaea HOM05D005552 ORTHO05D006743 2.9e-23 114.0 258 31.8
unitig_26.g9472 Utricularia gibba HOM05D005552 ORTHO05D006743 9.3e-22 109.0 199 39.2
MCO05G662 Micromonas commoda HOM05D005552 ORTHO05D006743 7.9e-21 105.9 215 30.2
Psat4g201960 Pisum sativum HOM05D005552 ORTHO05D006743 3.0e-20 104.0 133 45.1
SHI23015 Sapria himalayana HOM05D005552 ORTHO05D006743 4.3e-19 100.1 84 50.0
C01p02170 Brassica napus HOM05D005552 ORTHO05D006743 4.8e-18 96.7 130 43.8
BolC1t00209H Brassica oleracea HOM05D005552 ORTHO05D006743 4.8e-18 96.7 130 43.8
TAR376G0458 Trochodendron aralioides HOM05D005552 ORTHO05D006743 2.0e-16 91.3 72 61.1
Cre01.g043700 Chlamydomonas reinhardtii HOM05D005552 ORTHO05D006743 6.1e-13 79.7 227 27.3
Cpa.g.sc6.394 Carica papaya HOM05D005552 ORTHO05D006743 1.3e-10 72.0 138 37.7
Cfa026632 Carpinus fangiana HOM05D005552 ORTHO05D006743 2.8e-10 70.9 184 26.1
CSS0040680 Camellia sinensis var. sinensis HOM05D005552 ORTHO05D006743 3.1e-09 67.4 65 50.8
CSS0023439 Camellia sinensis var. sinensis HOM05D005552 ORTHO05D006743 1.3e-07 62.0 65 49.2
SHI23013 Sapria himalayana HOM05D001839 ORTHO05D001867 4.2e-06 57.0 69 49.3


User provided reference genes

Program Settings