Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0217 Ceratophyllum demersum HOM05D005698 ORTHO05D007022 1.3e-137 493.0 245 100.0
Nn8g39216 Nelumbo nucifera HOM05D005698 ORTHO05D007022 1.0e-25 121.3 197 40.6
MBI04_g08931_MAGBIO Magnolia biondii HOM05D005698 ORTHO05D007022 4.7e-23 112.5 213 36.6
Haze_16427 Corylus avellana HOM05D005698 ORTHO05D007022 4.1e-19 99.4 221 33.9
Haze_16426 Corylus avellana HOM05D005698 ORTHO05D007022 5.4e-19 99.0 221 33.9
Manes.11G047400 Manihot esculenta HOM05D005698 ORTHO05D007022 1.2e-18 97.8 231 33.8
QL05p023538 Quercus lobata HOM05D005698 ORTHO05D007022 1.2e-18 97.8 213 36.2
TWI18G1188 Tripterygium wilfordii HOM05D005698 ORTHO05D007022 6.0e-18 95.5 209 35.9
TAR626G1675 Trochodendron aralioides HOM05D005698 ORTHO05D007022 1.7e-17 94.0 196 36.7
Ciclev10027509m.g Citrus clementina HOM05D005698 ORTHO05D007022 2.3e-17 93.6 229 34.9
Thecc.06G087500 Theobroma cacao HOM05D005698 ORTHO05D007022 2.3e-17 93.6 218 33.9
vmacro18912 Vaccinium macrocarpon HOM05D005698 ORTHO05D007022 2.3e-17 93.6 223 33.2
COL.COLO4_30372 Corchorus olitorius HOM05D005698 ORTHO05D007022 5.1e-17 92.4 235 33.6
Gorai.009G133400 Gossypium raimondii HOM05D005698 ORTHO05D007022 5.1e-17 92.4 224 36.2
Aqoxy7G01740 Aquilegia oxysepala HOM05D005698 ORTHO05D007022 1.1e-16 91.3 222 35.6
Gohir.D05G129200 Gossypium hirsutum HOM05D005698 ORTHO05D007022 1.1e-16 91.3 225 36.4
CiPaw.01G239200 Carya illinoinensis HOM05D005698 ORTHO05D007022 1.5e-16 90.9 223 34.1
Atru.chr1.3272 Acer truncatum HOM05D005698 ORTHO05D007022 2.5e-16 90.1 223 32.7
Gohir.A05G130200 Gossypium hirsutum HOM05D005698 ORTHO05D007022 2.5e-16 90.1 225 36.0
Lj3g0002803 Lotus japonicus HOM05D005698 ORTHO05D007022 3.3e-16 89.7 240 34.6
Sopen03g039060 Solanum pennellii HOM05D005698 ORTHO05D007022 3.3e-16 89.7 211 34.1
EL10Ac9g22001 Beta vulgaris HOM05D005698 ORTHO05D007022 5.6e-16 89.0 239 31.0
DCAR_016221 Daucus carota HOM05D005698 ORTHO05D007022 5.6e-16 89.0 214 35.0
Cfa002068 Carpinus fangiana HOM05D005698 ORTHO05D007022 9.6e-16 88.2 228 33.3
Rhsim08G0221400 Rhododendron simsii HOM05D005698 ORTHO05D007022 9.6e-16 88.2 211 32.7
Sabra01G0146400 Salix brachista HOM05D005698 ORTHO05D007022 9.6e-16 88.2 223 33.6
CANSAT56G4241 Cannabis sativa HOM05D005698 ORTHO05D007022 1.2e-15 87.8 203 35.0
Sed0026047 Sechium edule HOM05D005698 ORTHO05D007022 1.2e-15 87.8 204 33.3
Potri.001G180400 Populus trichocarpa HOM05D005698 ORTHO05D007022 1.6e-15 87.4 236 33.9
Solyc03g120190.3 Solanum lycopersicum HOM05D005698 ORTHO05D007022 1.6e-15 87.4 205 33.7
Cpa.g.sc22.83 Carica papaya HOM05D005698 ORTHO05D007022 2.1e-15 87.0 207 34.8
ClCG09G002130 Citrullus lanatus HOM05D005698 ORTHO05D007022 2.1e-15 87.0 215 34.0
Duzib235G1511 Durio zibethinus HOM05D005698 ORTHO05D007022 2.1e-15 87.0 226 32.3
Duzib160G0336 Durio zibethinus HOM05D005698 ORTHO05D007022 2.8e-15 86.7 230 34.3
PGSC0003DMG400005682 Solanum tuberosum HOM05D005698 ORTHO05D007022 8.1e-15 85.1 214 33.2
Gohir.D03G064000 Gossypium hirsutum HOM05D005698 ORTHO05D007022 1.4e-14 84.3 220 36.8
Cc04_g03420 Coffea canephora HOM05D005698 ORTHO05D007022 1.8e-14 84.0 221 33.0
MELO3C024232.2 Cucumis melo HOM05D005698 ORTHO05D007022 1.8e-14 84.0 213 35.2
TAR383G0214 Trochodendron aralioides HOM05D000062 ORTHO05D007022 2.4e-14 83.6 188 36.7
CsaV3_7G033180 Cucumis sativus L. HOM05D005698 ORTHO05D007022 3.1e-14 83.2 211 34.6
Eucgr.F03014 Eucalyptus grandis HOM05D005698 ORTHO05D007022 6.9e-14 82.0 233 32.2
Gorai.002G059300 Gossypium raimondii HOM05D005698 ORTHO05D007022 6.9e-14 82.0 227 34.4
GSVIVG01017105001 Vitis vinifera HOM05D005698 ORTHO05D007022 1.2e-13 81.3 217 32.7
Oeu000452.1 Olea europaea HOM05D005698 ORTHO05D007022 1.5e-13 80.9 192 30.7
Nn2g11777 Nelumbo nucifera HOM05D005698 ORTHO05D007022 2.0e-13 80.5 214 30.8
Lalb_Chr22g0351291 Lupinus albus HOM05D005698 ORTHO05D007022 2.6e-13 80.1 260 34.6
Manes.04G123500 Manihot esculenta HOM05D005698 ORTHO05D007022 2.6e-13 80.1 233 30.5
Sed0003014 Sechium edule HOM05D005698 ORTHO05D007022 3.4e-13 79.7 209 31.1
Psat5g298880 Pisum sativum HOM05D005698 ORTHO05D007022 7.6e-13 78.6 223 30.9
Prupe.3G070900 Prunus persica HOM05D005698 ORTHO05D007022 9.9e-13 78.2 245 30.6
Ca_01116_v3 Cicer arietinum L. HOM05D005698 ORTHO05D007022 1.7e-12 77.4 215 34.0
Ah.01g005360 Amaranthus hybridus HOM05D005698 ORTHO05D007022 4.9e-12 75.9 243 32.5
Gohir.A02G121401 Gossypium hirsutum HOM05D005698 ORTHO05D007022 4.9e-12 75.9 227 33.9
Ah.01g005330 Amaranthus hybridus HOM05D005698 ORTHO05D007022 8.4e-12 75.1 239 31.0
Lalb_Chr14g0373391 Lupinus albus HOM05D005698 ORTHO05D007022 1.9e-11 73.9 225 31.6
PGR102G1470 Punica granatum HOM05D005698 ORTHO05D007022 3.2e-11 73.2 230 29.6
Glyma.15G014500 Glycine max HOM05D005698 ORTHO05D007022 4.2e-11 72.8 205 32.2
Medtr2g102140 Medicago truncatula HOM05D005698 ORTHO05D007022 4.2e-11 72.8 235 30.6
Actinidia08979 Actinidia chinensis HOM05D005698 ORTHO05D007022 7.1e-11 72.0 153 34.6
Medtr4g012060 Medicago truncatula HOM05D005698 ORTHO05D007022 7.1e-11 72.0 214 30.4
Nitab4.5_0005851g0020 Nicotiana tabacum HOM05D005698 ORTHO05D007022 7.1e-11 72.0 200 32.5
Psat7g252280 Pisum sativum HOM05D005698 ORTHO05D007022 1.2e-10 71.2 197 31.5
CAN.G438.68 Capsicum annuum HOM05D005698 ORTHO05D007022 1.6e-10 70.9 172 31.4
Nitab4.5_0000671g0090 Nicotiana tabacum HOM05D005698 ORTHO05D007022 2.1e-10 70.5 208 31.2
MD17G1194900 Malus domestica HOM05D005698 ORTHO05D007022 2.7e-10 70.1 239 30.1
TAR624G1392 Trochodendron aralioides HOM05D005698 ORTHO05D007022 2.7e-10 70.1 200 32.0
SalBow2G2683 Salvia bowleyana HOM05D005698 ORTHO05D007022 4.6e-10 69.3 204 32.4
HPP92_005541 Vanilla planifolia HOM05D005698 ORTHO05D007022 6.0e-10 68.9 201 28.9
MSTRG.11075 Avicennia marina HOM05D005698 ORTHO05D007022 7.8e-10 68.6 201 31.3
Hma1.2p1_0092F.1_g046640 Hydrangea macrophylla HOM05D005698 ORTHO05D007022 1.0e-09 68.2 217 27.6
arahy.Tifrunner.gnm1.ann1.89WW7B Arachis hypogaea HOM05D005698 ORTHO05D007022 1.7e-09 67.4 233 29.6
arahy.Tifrunner.gnm1.ann1.N83S5Z Arachis hypogaea HOM05D005698 ORTHO05D007022 1.7e-09 67.4 233 29.6
TPR.G37263 Trifolium pratense HOM05D005698 ORTHO05D007022 3.9e-09 66.2 238 30.7
PSO063G3283 Papaver somniferum HOM05D005698 ORTHO05D007022 5.1e-09 65.9 253 30.0
Actinidia32756 Actinidia chinensis HOM05D005698 ORTHO05D007022 2.5e-08 63.5 208 28.4
Actinidia01804 Actinidia chinensis HOM05D005698 ORTHO05D007022 3.3e-08 63.2 171 30.4
THA.LOC104813559 Tarenaya hassleriana HOM05D005698 ORTHO05D007022 5.6e-08 62.4 223 30.5
Glyma.07G006200 Glycine max HOM05D005698 ORTHO05D007022 7.3e-08 62.0 189 31.7
RcHm_v2.0_Chr2g0137881 Rosa chinensis HOM05D005698 ORTHO05D007022 9.6e-08 61.6 272 28.3
arahy.Tifrunner.gnm1.ann1.FXB1YX Arachis hypogaea HOM05D005698 ORTHO05D007022 1.6e-07 60.8 246 27.6
A07p45460 Brassica napus HOM05D005698 ORTHO05D007022 2.8e-07 60.1 208 30.3
Dinv38046 Davidia involucrata HOM05D005698 ORTHO05D007022 2.8e-07 60.1 85 44.7
Lj3g0025336 Lotus japonicus HOM05D005698 ORTHO05D007022 2.8e-07 60.1 146 37.0
Dinv30508 Davidia involucrata HOM05D005698 ORTHO05D007022 3.6e-07 59.7 206 29.1
MSTRG.22690 Avicennia marina HOM05D005698 ORTHO05D007022 4.8e-07 59.3 200 28.0
FAN02G4608 Fragaria x ananassa HOM05D005698 ORTHO05D007022 6.2e-07 58.9 263 27.4
CSS0018166 Camellia sinensis var. sinensis HOM05D005698 ORTHO05D007022 8.1e-07 58.5 79 46.8
FvH4_6g31210 Fragaria vesca HOM05D005698 ORTHO05D007022 1.1e-06 58.2 261 27.6
arahy.Tifrunner.gnm1.ann1.PSA787 Arachis hypogaea HOM05D005698 ORTHO05D007022 1.4e-06 57.8 85 43.5
Lj6g0021534 Lotus japonicus HOM05D005698 ORTHO05D007022 2.4e-06 57.0 205 31.2
Sc21g0005120 Simmondsia chinensis HOM05D005698 ORTHO05D007022 2.4e-06 57.0 200 29.5
TPR.G24208 Trifolium pratense HOM05D005698 ORTHO05D007022 2.4e-06 57.0 224 26.8
C06p54310 Brassica napus HOM05D005698 ORTHO05D007022 3.1e-06 56.6 208 31.2
BolC6t40442H Brassica oleracea HOM05D005698 ORTHO05D007022 3.1e-06 56.6 208 31.2
BraA07t32050Z Brassica rapa HOM05D005698 ORTHO05D007022 3.1e-06 56.6 208 29.8
FAN05G1794 Fragaria x ananassa HOM05D005698 ORTHO05D007022 6.9e-06 55.5 262 26.0


User provided reference genes

Program Settings