Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 2.3e-193 678.7 338 100.0
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 3.3e-144 515.4 327 78.3
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 7.5e-144 514.2 332 77.1
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 2.8e-143 512.3 330 77.6
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 8.2e-143 510.8 332 76.8
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 8.2e-143 510.8 333 75.4
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 5.3e-142 508.1 333 75.4
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 2.0e-141 506.1 325 77.2
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 7.7e-141 504.2 330 77.0
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.0e-140 503.8 344 74.4
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 1.0e-140 503.8 326 76.7
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 2.2e-140 502.7 323 77.7
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 6.5e-140 501.1 320 77.5
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 6.5e-140 501.1 326 77.0
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 8.5e-140 500.7 320 77.5
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 8.5e-140 500.7 326 76.7
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 1.1e-139 500.4 336 74.4
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.9e-139 499.6 341 73.3
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 4.2e-139 498.4 326 76.1
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 5.5e-139 498.0 338 74.0
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 9.4e-139 497.3 327 75.8
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.2e-138 496.9 338 73.7
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.6e-138 496.5 326 75.8
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 1.6e-138 496.5 324 75.9
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 3.6e-138 495.4 318 77.7
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 3.6e-138 495.4 330 75.5
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 3.6e-138 495.4 325 76.6
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 8.0e-138 494.2 326 76.1
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 2.3e-137 492.7 319 76.5
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 6.8e-137 491.1 326 74.8
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 6.8e-137 491.1 328 75.0
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 6.8e-137 491.1 326 75.2
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.2e-136 490.3 326 75.2
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 2.6e-136 489.2 322 74.2
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 3.4e-136 488.8 320 75.9
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 3.4e-136 488.8 315 77.8
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 4.4e-136 488.4 322 75.5
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 7.5e-136 487.6 327 74.3
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 9.8e-136 487.3 329 73.9
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 9.8e-136 487.3 326 74.5
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 9.8e-136 487.3 348 72.7
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 1.3e-135 486.9 326 75.5
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 1.7e-135 486.5 326 74.2
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 1.7e-135 486.5 326 73.9
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 3.7e-135 485.3 315 74.9
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 6.3e-135 484.6 325 74.2
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 6.3e-135 484.6 317 75.1
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 8.3e-135 484.2 361 69.0
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 1.4e-134 483.4 337 72.4
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 1.8e-134 483.0 337 72.4
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 2.4e-134 482.6 325 72.9
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 2.4e-134 482.6 338 71.6
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 3.1e-134 482.3 316 74.7
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 4.1e-134 481.9 329 73.6
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 4.1e-134 481.9 326 73.0
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 5.4e-134 481.5 318 74.8
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 9.1e-134 480.7 327 73.1
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 1.2e-133 480.3 317 74.8
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 2.7e-133 479.2 327 72.2
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 4.5e-133 478.4 326 74.2
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 1.0e-132 477.2 368 67.4
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 1.0e-132 477.2 312 75.6
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 1.0e-132 477.2 328 73.2
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 1.3e-132 476.9 326 74.2
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 1.7e-132 476.5 318 74.2
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 3.8e-132 475.3 326 73.3
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 8.5e-132 474.2 367 67.3
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 1.5e-131 473.4 322 73.9
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 5.5e-131 471.5 320 75.0
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 7.2e-131 471.1 313 76.7
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 7.5e-128 461.1 305 76.7
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.3e-127 460.3 324 71.6
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.7e-127 459.9 336 69.0
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 1.7e-127 459.9 311 71.7
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 4.9e-127 458.4 308 75.6
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 8.3e-127 457.6 326 70.2
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.4e-126 456.8 367 64.6
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 4.1e-126 455.3 320 71.6
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 5.4e-126 454.9 293 77.8
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 5.6e-123 444.9 341 68.6
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 2.1e-122 443.0 343 67.6
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 2.1e-122 443.0 343 67.6
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 4.7e-122 441.8 320 69.4
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 4.0e-121 438.7 358 64.5
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 4.9e-119 431.8 325 66.8
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 1.8e-118 429.9 301 73.4
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 2.0e-117 426.4 382 60.5
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 1.0e-116 424.1 283 74.9
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 3.0e-116 422.5 328 66.8
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 2.5e-115 419.5 284 74.3
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 3.3e-115 419.1 281 75.4
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 2.1e-114 416.4 306 69.0
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 4.7e-114 415.2 287 73.2
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 8.0e-114 414.5 327 67.9
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 1.7e-111 406.8 418 55.5
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 3.7e-111 405.6 267 75.3
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 1.2e-109 400.6 264 77.3
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 6.0e-109 398.3 281 71.9
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 3.9e-108 395.6 328 63.4
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 5.0e-108 395.2 327 60.2
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 8.6e-108 394.4 315 59.4
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 5.6e-107 391.7 299 67.2
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 1.2e-106 390.6 335 62.1
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 4.0e-105 385.6 280 69.3
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 6.8e-105 384.8 226 88.1
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 1.7e-103 380.2 290 64.1
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 1.3e-100 370.5 319 58.3
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 8.6e-100 367.9 312 57.7
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 7.1e-94 348.2 234 76.9
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 3.9e-92 342.4 223 75.8
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 5.6e-91 338.6 315 53.3
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 2.8e-90 336.3 285 63.9
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 1.4e-89 334.0 275 64.7
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 4.9e-87 325.5 245 68.6
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 7.1e-86 321.6 229 68.6
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 4.5e-72 275.8 231 62.8
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 4.9e-71 272.3 359 43.7
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 8.7e-52 208.4 145 74.5
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 3.7e-50 203.0 327 37.6
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 8.8e-44 181.8 181 56.4
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 3.3e-43 179.9 133 69.9
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 3.1e-41 173.3 129 69.0
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 3.4e-40 169.9 271 38.7
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 2.2e-39 167.2 104 72.1
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 3.0e-28 130.2 97 68.0
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 7.0e-17 92.4 96 49.0
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 4.2e-14 83.2 82 53.7
MD02G1212000 Malus domestica HOM05D006055 ORTHO05D007480 1.4e-12 78.2 43 81.4
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 2.8e-10 70.5 50 72.0


User provided reference genes

Program Settings