Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0141 Ceratophyllum demersum HOM05D005166 ORTHO05D006120 2.6e-251 871.7 485 100.0
CDE07G0344 Ceratophyllum demersum HOM05D005166 ORTHO05D006120 4.5e-110 402.5 807 39.9
CDE06G2066 Ceratophyllum demersum HOM05D005166 ORTHO05D006120 6.7e-53 212.6 153 87.6
HPP92_012608 Vanilla planifolia HOM05D005166 ORTHO05D006120 1.1e-52 211.8 113 92.9
MBI14_g11598_MAGBIO Magnolia biondii HOM05D005166 ORTHO05D006120 2.5e-52 210.7 113 91.2
Dinv34287 Davidia involucrata HOM05D005166 ORTHO05D006120 9.6e-52 208.8 168 69.0
Rhsim13G0077000 Rhododendron simsii HOM05D005166 ORTHO05D006120 1.6e-51 208.0 167 69.5
Thecc.09G315500 Theobroma cacao HOM05D005166 ORTHO05D006120 3.7e-51 206.8 278 49.3
TAR636G0020 Trochodendron aralioides HOM05D005166 ORTHO05D006120 3.7e-51 206.8 113 88.5
TAR636G0138 Trochodendron aralioides HOM05D005166 ORTHO05D006120 3.7e-51 206.8 113 88.5
Nn2g11213 Nelumbo nucifera HOM05D005166 ORTHO05D006120 4.8e-51 206.5 305 47.9
Gorai.013G262700 Gossypium raimondii HOM05D005166 ORTHO05D006120 6.2e-51 206.1 173 65.9
DCAR_005942 Daucus carota HOM05D005166 ORTHO05D006120 8.1e-51 205.7 113 87.6
TAR633G1610 Trochodendron aralioides HOM05D005166 ORTHO05D006120 8.1e-51 205.7 112 91.1
vmacro03027 Vaccinium macrocarpon HOM05D005166 ORTHO05D006120 1.1e-50 205.3 167 68.3
Gohir.D13G232000 Gossypium hirsutum HOM05D005166 ORTHO05D006120 1.4e-50 204.9 171 66.1
Potri.009G036900 Populus trichocarpa HOM05D005166 ORTHO05D006120 2.4e-50 204.1 113 89.4
Gohir.A13G226600 Gossypium hirsutum HOM05D005166 ORTHO05D006120 3.1e-50 203.8 171 66.1
Nn2g13459 Nelumbo nucifera HOM05D005166 ORTHO05D006120 3.1e-50 203.8 311 46.0
ATR0559G187 Amborella trichopoda HOM05D005166 ORTHO05D006120 4.0e-50 203.4 171 65.5
CSS0046995 Camellia sinensis var. sinensis HOM05D005166 ORTHO05D006120 4.0e-50 203.4 170 67.1
Cc01_g13350 Coffea canephora HOM05D005166 ORTHO05D006120 4.0e-50 203.4 176 64.8
Glyma.11G136000 Glycine max HOM05D005166 ORTHO05D006120 4.0e-50 203.4 113 87.6
Manes.01G169300 Manihot esculenta HOM05D005166 ORTHO05D006120 4.0e-50 203.4 179 65.4
GSVIVG01024906001 Vitis vinifera HOM05D005166 ORTHO05D006120 4.0e-50 203.4 185 62.7
Sabra16G0148400 Salix brachista HOM05D005166 ORTHO05D006120 5.3e-50 203.0 113 88.5
Psat7g210320 Pisum sativum HOM05D005166 ORTHO05D006120 9.0e-50 202.2 113 87.6
Atru.chr3.3993_Atru.chr3.3994 Acer truncatum HOM05D005166 ORTHO05D006120 2.0e-49 201.1 172 62.8
Carub.0004s1023 Capsella rubella HOM05D005166 ORTHO05D006120 2.0e-49 201.1 129 78.3
Thhalv10016250m.g Eutrema salsugineum HOM05D005166 ORTHO05D006120 2.0e-49 201.1 203 56.2
Glyma.12G059700 Glycine max HOM05D005166 ORTHO05D006120 2.0e-49 201.1 113 86.7
Duzib168G0713 Durio zibethinus HOM05D005166 ORTHO05D006120 2.6e-49 200.7 278 48.6
CiPaw.13G089200 Carya illinoinensis HOM05D005166 ORTHO05D006120 3.4e-49 200.3 171 64.9
SGA_v2.0_scaffold111G31544 Striga asiatica HOM05D005166 ORTHO05D006120 3.4e-49 200.3 113 85.8
Ca_20616_v3 Cicer arietinum L. HOM05D005166 ORTHO05D006120 5.8e-49 199.5 113 85.8
Dinv17047 Davidia involucrata HOM05D005166 ORTHO05D006120 5.8e-49 199.5 171 64.3
THA.LOC104800686 Tarenaya hassleriana HOM05D005166 ORTHO05D006120 7.6e-49 199.1 182 62.1
Haze_24170 Corylus avellana HOM05D005166 ORTHO05D006120 9.9e-49 198.7 113 87.6
Haze_24175 Corylus avellana HOM05D005166 ORTHO05D006120 9.9e-49 198.7 113 87.6
Phvul.011G061700 Phaseolus vulgaris HOM05D005166 ORTHO05D006120 9.9e-49 198.7 113 85.8
arahy.Tifrunner.gnm1.ann1.L8ZXQA Arachis hypogaea HOM05D005166 ORTHO05D006120 1.3e-48 198.4 113 85.8
Eucgr.B02307 Eucalyptus grandis HOM05D005166 ORTHO05D006120 1.3e-48 198.4 172 64.5
Hund04921 Selenicereus undatus HOM05D005166 ORTHO05D006120 1.3e-48 198.4 173 63.0
SEGI_12829 Sequoiadendron giganteum HOM05D005166 ORTHO05D006120 1.3e-48 198.4 113 87.6
VMungo1127G2033 Vigna mungo HOM05D005166 ORTHO05D006120 1.3e-48 198.4 113 85.0
MD11G1094700 Malus domestica HOM05D005166 ORTHO05D006120 1.7e-48 198.0 164 66.5
Os03g0270200 Oryza sativa ssp. japonica HOM05D005166 ORTHO05D006120 1.7e-48 198.0 171 65.5
AT2G29210 Arabidopsis thaliana HOM05D005166 ORTHO05D006120 2.2e-48 197.6 112 85.7
Lj3g0025501 Lotus japonicus HOM05D005166 ORTHO05D006120 2.2e-48 197.6 113 85.0
Lalb_Chr01g0003471 Lupinus albus HOM05D005166 ORTHO05D006120 2.2e-48 197.6 113 85.8
Medtr4g064740 Medicago truncatula HOM05D005166 ORTHO05D006120 3.8e-48 196.8 211 55.9
AUR62001736 Chenopodium quinoa HOM05D005166 ORTHO05D006120 6.4e-48 196.1 114 86.0
AUR62020041 Chenopodium quinoa HOM05D005166 ORTHO05D006120 6.4e-48 196.1 114 86.0
Migut.D00877 Erythranthe guttata HOM05D005166 ORTHO05D006120 6.4e-48 196.1 113 83.2
Potri.001G244600 Populus trichocarpa HOM05D005166 ORTHO05D006120 6.4e-48 196.1 179 61.5
AL4G23770 Arabidopsis lyrata HOM05D005166 ORTHO05D006120 8.4e-48 195.7 176 63.1
Dinv42991 Davidia involucrata HOM05D005166 ORTHO05D006120 8.4e-48 195.7 310 44.8
Dinv43106 Davidia involucrata HOM05D005166 ORTHO05D006120 8.4e-48 195.7 310 44.8
COL.COLO4_18578 Corchorus olitorius HOM05D005166 ORTHO05D006120 1.1e-47 195.3 171 63.7
QL01p029224 Quercus lobata HOM05D005166 ORTHO05D006120 1.1e-47 195.3 112 86.6
Zm00001eb012100 Zea mays HOM05D005166 ORTHO05D006120 1.1e-47 195.3 113 84.1
CAN.G3.46 Capsicum annuum HOM05D005166 ORTHO05D006120 1.4e-47 194.9 286 45.8
Ciclev10030390m.g Citrus clementina HOM05D005166 ORTHO05D006120 1.4e-47 194.9 173 64.2
Lalb_Chr03g0026441 Lupinus albus HOM05D005166 ORTHO05D006120 1.4e-47 194.9 113 85.0
RcHm_v2.0_Chr5g0066361 Rosa chinensis HOM05D005166 ORTHO05D006120 1.9e-47 194.5 174 62.6
Solyc09g030390.3 Solanum lycopersicum HOM05D005166 ORTHO05D006120 2.5e-47 194.1 283 47.3
EL10Ac7g16070 Beta vulgaris HOM05D005166 ORTHO05D006120 3.2e-47 193.7 113 85.8
Hma1.2p1_1664F.1_g296420 Hydrangea macrophylla HOM05D005166 ORTHO05D006120 3.2e-47 193.7 305 46.2
Nitab4.5_0005248g0020 Nicotiana tabacum HOM05D005166 ORTHO05D006120 3.2e-47 193.7 184 62.5
TPR.G23607 Trifolium pratense HOM05D005166 ORTHO05D006120 3.2e-47 193.7 113 84.1
Cpa.g.sc81.97 Carica papaya HOM05D005166 ORTHO05D006120 5.5e-47 193.0 107 87.9
Nitab4.5_0001999g0010 Nicotiana tabacum HOM05D005166 ORTHO05D006120 5.5e-47 193.0 191 58.1
Aa31LG5G7110 Aethionema arabicum HOM05D005166 ORTHO05D006120 7.1e-47 192.6 165 64.2
Sed0011931 Sechium edule HOM05D005166 ORTHO05D006120 7.1e-47 192.6 113 85.8
Sopen09g013470 Solanum pennellii HOM05D005166 ORTHO05D006120 7.1e-47 192.6 283 46.3
CsaV3_1G034540 Cucumis sativus L. HOM05D005166 ORTHO05D006120 9.3e-47 192.2 186 60.2
PSO339G5769 Papaver somniferum HOM05D005166 ORTHO05D006120 9.3e-47 192.2 264 49.2
Sabra09G0026100 Salix brachista HOM05D005166 ORTHO05D006120 9.3e-47 192.2 171 63.2
PGSC0003DMG400027986 Solanum tuberosum HOM05D005166 ORTHO05D006120 1.2e-46 191.8 222 50.9
Sp4g12020 Schrenkiella parvula HOM05D005166 ORTHO05D006120 1.6e-46 191.4 174 59.8
AagrBONN_evm.TU.Sc2ySwM_117.3439 Anthoceros agrestis HOM05D005166 ORTHO05D006120 2.7e-46 190.7 171 62.6
MD03G1086100 Malus domestica HOM05D005166 ORTHO05D006120 2.7e-46 190.7 268 47.4
MSTRG.21221 Avicennia marina HOM05D005166 ORTHO05D006120 3.5e-46 190.3 201 56.2
ECA247G0723 Erigeron canadensis HOM05D005166 ORTHO05D006120 4.6e-46 189.9 170 62.4
FvH4_3g36942 Fragaria vesca HOM05D005166 ORTHO05D006120 4.6e-46 189.9 184 61.4
Peaxi162Scf00676g00220 Petunia axillaris HOM05D005166 ORTHO05D006120 4.6e-46 189.9 184 58.7
FAN16G3680 Fragaria x ananassa HOM05D005166 ORTHO05D006120 6.0e-46 189.5 183 61.7
FAN25G3327 Fragaria x ananassa HOM05D005166 ORTHO05D006120 6.0e-46 189.5 184 61.4
FAN11G2353 Fragaria x ananassa HOM05D005166 ORTHO05D006120 7.9e-46 189.1 179 62.6
Mapoly0063s0002 Marchantia polymorpha HOM05D005166 ORTHO05D006120 7.9e-46 189.1 112 83.0
Lsat_1_v5_gn_9_24820 Lactuca sativa HOM05D005166 ORTHO05D006120 1.0e-45 188.7 162 64.2
BcaB02g10233 Brassica carinata HOM05D005166 ORTHO05D006120 1.8e-45 188.0 112 82.1
A05p16120 Brassica napus HOM05D005166 ORTHO05D006120 1.8e-45 188.0 112 82.1
FAN21G1054 Fragaria x ananassa HOM05D005166 ORTHO05D006120 2.3e-45 187.6 287 47.4
Pp3c3_30240 Physcomitrium patens HOM05D005166 ORTHO05D006120 2.3e-45 187.6 265 48.7
Pp3c3_30241 Physcomitrium patens HOM05D005166 ORTHO05D006120 2.3e-45 187.6 265 48.7
Prupe.6G070300 Prunus persica HOM05D005166 ORTHO05D006120 2.3e-45 187.6 175 60.0
BraA05t20522Z Brassica rapa HOM05D005166 ORTHO05D006120 3.0e-45 187.2 112 82.1
C04p21810 Brassica napus HOM05D005166 ORTHO05D006120 6.7e-45 186.0 146 65.1
BolC4t23701H Brassica oleracea HOM05D005166 ORTHO05D006120 6.7e-45 186.0 146 65.1
Aqoxy2G02310 Aquilegia oxysepala HOM05D005166 ORTHO05D006120 8.7e-45 185.7 190 58.4
HanXRQChr01g0001871 Helianthus annuus HOM05D005166 ORTHO05D006120 8.7e-45 185.7 165 61.8
Lalb_Chr19g0137981 Lupinus albus HOM05D005166 ORTHO05D006120 8.7e-45 185.7 282 47.2
HanXRQChr08g0237471 Helianthus annuus HOM05D005166 ORTHO05D006120 1.5e-44 184.9 186 57.5
Pp3c10_18390 Physcomitrium patens HOM05D005166 ORTHO05D006120 7.4e-44 182.6 179 58.7
SMO144G0189 Selaginella moellendorffii HOM05D005166 ORTHO05D006120 9.6e-44 182.2 112 80.4
arahy.Tifrunner.gnm1.ann1.SP769B Arachis hypogaea HOM05D005166 ORTHO05D006120 3.7e-43 180.3 139 69.8
Ah.08g220070 Amaranthus hybridus HOM05D005166 ORTHO05D006120 8.2e-43 179.1 166 62.0
HanXRQChr08g0237371 Helianthus annuus HOM05D005166 ORTHO05D006120 9.0e-42 175.6 199 53.8
SHI05908 Sapria himalayana HOM05D005166 ORTHO05D006120 1.3e-37 161.8 206 50.0
CBR_g50691 Chara braunii HOM05D005166 ORTHO05D006120 3.0e-37 160.6 203 49.8
SHI31247 Sapria himalayana HOM05D005166 ORTHO05D006120 1.6e-35 154.8 116 68.1
PGR102G2168 Punica granatum HOM05D005166 ORTHO05D006120 3.1e-34 150.6 173 54.3
Sc12g0001240 Simmondsia chinensis HOM05D005166 ORTHO05D006120 2.3e-29 134.4 192 47.9
unitig_746.g26715 Utricularia gibba HOM05D005166 ORTHO05D006120 2.5e-28 131.0 74 81.1
BcaB05g22029 Brassica carinata HOM05D005166 ORTHO05D006120 5.0e-24 116.7 75 74.7
Sed0000001 Sechium edule HOM05D005166 ORTHO05D006120 5.0e-24 116.7 148 49.3
SHI07724 Sapria himalayana HOM05D005166 ORTHO05D006120 6.5e-24 116.3 132 52.3
SHI33547 Sapria himalayana HOM05D005166 ORTHO05D006120 6.5e-24 116.3 157 45.9
SHI32778 Sapria himalayana HOM05D005166 ORTHO05D006120 1.1e-23 115.5 113 58.4
Cre16.g678050 Chlamydomonas reinhardtii HOM05D005166 ORTHO05D006120 2.8e-19 100.9 115 49.6
SHI25075 Sapria himalayana HOM05D005166 ORTHO05D006120 1.6e-14 85.1 77 57.1
MCO11G283 Micromonas commoda HOM05D005166 ORTHO05D006120 1.0e-13 82.4 91 47.3
CDE06G2602 Ceratophyllum demersum HOM05D005166 ORTHO05D006120 2.6e-12 77.8 124 46.0
HanXRQChr08g0237461 Helianthus annuus HOM05D005166 ORTHO05D006120 5.3e-10 70.1 50 72.0
Zm00001eb222410 Zea mays HOM05D005166 ORTHO05D006120 8.5e-08 62.8 36 83.3
PRCOL_00003490 Prasinoderma coloniale HOM05D005166 ORTHO05D006120 1.5e-07 62.0 190 28.9
Zm00001eb397830 Zea mays HOM05D005166 ORTHO05D006120 8.0e-06 56.2 91 42.9


User provided reference genes

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