Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0139 Ceratophyllum demersum HOM05D000350 ORTHO05D000228 4.1e-218 761.1 394 100.0
CDE08G0860 Ceratophyllum demersum HOM05D000350 ORTHO05D000228 2.7e-209 731.9 394 95.9
TAR381G1380 Trochodendron aralioides HOM05D000350 ORTHO05D000228 4.9e-70 269.2 350 50.6
Nn5g27611 Nelumbo nucifera HOM05D000350 ORTHO05D000228 2.0e-63 247.3 456 43.4
CSS0019031 Camellia sinensis var. sinensis HOM05D000350 ORTHO05D000228 1.2e-57 228.0 405 43.7
Hma1.2p1_1108F.1_g257880 Hydrangea macrophylla HOM05D000350 ORTHO05D000228 4.0e-56 223.0 444 40.5
PGSC0003DMG400024928 Solanum tuberosum HOM05D000350 ORTHO05D000228 1.7e-54 217.6 384 44.3
Dinv19395 Davidia involucrata HOM05D000350 ORTHO05D000228 2.2e-54 217.2 388 41.8
MBI17_g09748_MAGBIO Magnolia biondii HOM05D000350 ORTHO05D000228 2.9e-54 216.9 465 40.6
Gorai.002G215000 Gossypium raimondii HOM05D000350 ORTHO05D000228 6.4e-54 215.7 392 42.9
Gohir.A01G182200 Gossypium hirsutum HOM05D000350 ORTHO05D000228 1.4e-53 214.5 392 42.6
Gohir.D01G173300 Gossypium hirsutum HOM05D000350 ORTHO05D000228 3.2e-53 213.4 392 42.6
Dinv01846 Davidia involucrata HOM05D000350 ORTHO05D000228 6.0e-52 209.1 418 40.2
Duzib248G0668 Durio zibethinus HOM05D000350 ORTHO05D000228 1.7e-51 207.6 404 41.3
Thecc.02G025500 Theobroma cacao HOM05D000350 ORTHO05D000228 5.1e-51 206.1 401 41.9
CiPaw.06G143600 Carya illinoinensis HOM05D000350 ORTHO05D000228 8.6e-51 205.3 456 37.9
QL02p099882 Quercus lobata HOM05D000350 ORTHO05D000228 8.6e-51 205.3 397 41.6
Sopen01g046180 Solanum pennellii HOM05D000350 ORTHO05D000228 8.6e-51 205.3 406 41.9
Gohir.A04G130000 Gossypium hirsutum HOM05D000350 ORTHO05D000228 2.5e-50 203.8 429 39.4
Nitab4.5_0007913g0020 Nicotiana tabacum HOM05D000350 ORTHO05D000228 5.6e-50 202.6 347 44.7
Gohir.D04G175200 Gossypium hirsutum HOM05D000350 ORTHO05D000228 1.6e-49 201.1 435 40.5
CSS0012847 Camellia sinensis var. sinensis HOM05D000350 ORTHO05D000228 2.8e-49 200.3 396 39.9
Cpa.g.sc30.48 Carica papaya HOM05D000350 ORTHO05D000228 2.8e-49 200.3 406 38.7
Gorai.012G166500 Gossypium raimondii HOM05D000350 ORTHO05D000228 4.7e-49 199.5 435 39.8
COL.COLO4_17758 Corchorus olitorius HOM05D000350 ORTHO05D000228 8.1e-49 198.7 425 40.2
Duzib132G0811 Durio zibethinus HOM05D000350 ORTHO05D000228 4.0e-48 196.4 410 41.0
Lsat_1_v5_gn_5_103680 Lactuca sativa HOM05D000350 ORTHO05D000228 1.5e-47 194.5 417 38.8
Prupe.1G576500 Prunus persica HOM05D000350 ORTHO05D000228 4.4e-47 193.0 427 39.8
TWI14G0578 Tripterygium wilfordii HOM05D000350 ORTHO05D000228 5.8e-47 192.6 375 40.8
DCAR_006683 Daucus carota HOM05D000350 ORTHO05D000228 7.6e-47 192.2 416 40.1
Nitab4.5_0000948g0150 Nicotiana tabacum HOM05D000350 ORTHO05D000228 1.7e-46 191.0 380 40.8
CiPaw.05G051300 Carya illinoinensis HOM05D000350 ORTHO05D000228 8.4e-46 188.7 407 39.8
Cc02_g22960 Coffea canephora HOM05D000350 ORTHO05D000228 8.4e-46 188.7 423 38.5
CAN.G798.44 Capsicum annuum HOM05D000350 ORTHO05D000228 2.4e-45 187.2 391 39.6
Cfa005483 Carpinus fangiana HOM05D000350 ORTHO05D000228 2.4e-45 187.2 336 41.7
MD08G1240000 Malus domestica HOM05D000350 ORTHO05D000228 2.4e-45 187.2 470 36.6
Actinidia39014 Actinidia chinensis HOM05D000350 ORTHO05D000228 3.2e-45 186.8 468 36.5
Oeu000125.1 Olea europaea HOM05D000350 ORTHO05D000228 1.6e-44 184.5 422 38.2
Oeu036680.2 Olea europaea HOM05D000350 ORTHO05D000228 2.7e-44 183.7 412 37.6
ATR0584G103 Amborella trichopoda HOM05D000350 ORTHO05D000228 3.5e-44 183.3 434 38.2
MD15G1431700 Malus domestica HOM05D000350 ORTHO05D000228 3.5e-44 183.3 429 37.3
HanXRQChr10g0294511 Helianthus annuus HOM05D000350 ORTHO05D000228 4.6e-44 183.0 392 38.3
Manes.10G120400 Manihot esculenta HOM05D000350 ORTHO05D000228 1.0e-43 181.8 434 37.6
Rhsim11G0125700 Rhododendron simsii HOM05D000350 ORTHO05D000228 3.9e-43 179.9 389 39.6
TWI23G1234 Tripterygium wilfordii HOM05D000350 ORTHO05D000228 1.2e-41 174.9 369 39.3
Phvul.006G217800 Phaseolus vulgaris HOM05D000350 ORTHO05D000228 3.6e-41 173.3 378 37.3
TWI59G0579 Tripterygium wilfordii HOM05D000350 ORTHO05D000228 8.1e-41 172.2 318 41.5
HPP92_027800 Vanilla planifolia HOM05D000350 ORTHO05D000228 3.1e-40 170.2 369 37.7
Actinidia00187 Actinidia chinensis HOM05D000350 ORTHO05D000228 4.0e-40 169.9 393 36.6
Sed0024468 Sechium edule HOM05D000350 ORTHO05D000228 4.0e-40 169.9 367 39.2
Sabra01G0168200 Salix brachista HOM05D000350 ORTHO05D000228 5.3e-40 169.5 369 39.3
MSTRG.5217 Avicennia marina HOM05D000350 ORTHO05D000228 6.9e-40 169.1 408 39.2
Potri.004G222100 Populus trichocarpa HOM05D000350 ORTHO05D000228 2.0e-39 167.5 459 35.7
Glyma.16G004300 Glycine max HOM05D000350 ORTHO05D000228 3.4e-39 166.8 373 38.6
Lj5P261T19 Lonicera japonica HOM05D000350 ORTHO05D000228 4.4e-39 166.4 230 49.6
VMungo0540G0398 Vigna mungo HOM05D000350 ORTHO05D000228 1.7e-38 164.5 408 35.8
TAR624G0184 Trochodendron aralioides HOM05D000350 ORTHO05D000228 6.4e-38 162.5 177 55.9
Haze_01821 Corylus avellana HOM05D000350 ORTHO05D000228 1.4e-37 161.4 236 45.3
arahy.Tifrunner.gnm1.ann1.22FU97 Arachis hypogaea HOM05D000350 ORTHO05D000228 1.9e-37 161.0 403 37.0
MBI17_g44301_MAGBIO Magnolia biondii HOM05D000350 ORTHO05D000228 7.1e-37 159.1 453 35.8
ECA234G4001 Erigeron canadensis HOM05D000350 ORTHO05D000228 7.8e-36 155.6 389 35.7
arahy.Tifrunner.gnm1.ann1.ABQ1RQ Arachis hypogaea HOM05D000350 ORTHO05D000228 6.6e-35 152.5 405 35.3
MSTRG.16500 Avicennia marina HOM05D000350 ORTHO05D000228 1.3e-33 148.3 403 35.2
MSTRG.16501 Avicennia marina HOM05D000350 ORTHO05D000228 1.3e-33 148.3 403 35.2
Lj6g0006864 Lotus japonicus HOM05D000350 ORTHO05D000228 4.8e-33 146.4 382 36.6
ClCG11G013380 Citrullus lanatus HOM05D000350 ORTHO05D000228 1.5e-31 141.4 398 34.9
Glyma.12G168300 Glycine max HOM05D000350 ORTHO05D000228 1.5e-31 141.4 381 35.4
Manes.07G022400 Manihot esculenta HOM05D000350 ORTHO05D000228 2.0e-31 141.0 418 34.4
Migut.B00803 Erythranthe guttata HOM05D000350 ORTHO05D000228 2.2e-30 137.5 380 33.7
HPP92_004434 Vanilla planifolia HOM05D000350 ORTHO05D000228 1.9e-29 134.4 197 43.1
Lalb_Chr20g0123661 Lupinus albus HOM05D000350 ORTHO05D000228 3.2e-29 133.7 315 36.5
SEGI_38392 Sequoiadendron giganteum HOM05D000350 ORTHO05D000228 4.2e-29 133.3 481 32.4
Duzib116G0923 Durio zibethinus HOM05D000350 ORTHO05D000228 6.0e-28 129.4 418 33.3
Medtr2g006150 Medicago truncatula HOM05D000350 ORTHO05D000228 6.0e-28 129.4 428 32.7
Gorai.009G289000 Gossypium raimondii HOM05D000350 ORTHO05D000228 1.0e-27 128.6 406 33.3
Gohir.D05G276000 Gossypium hirsutum HOM05D000350 ORTHO05D000228 3.0e-27 127.1 406 33.3
CsaV3_5G029900 Cucumis sativus L. HOM05D000350 ORTHO05D000228 3.9e-27 126.7 405 33.3
Gohir.A05G273600 Gossypium hirsutum HOM05D000350 ORTHO05D000228 3.9e-27 126.7 407 33.4
Sabra19G0093400 Salix brachista HOM05D000350 ORTHO05D000228 5.1e-27 126.3 382 33.8
Atru.chr6.722 Acer truncatum HOM05D000350 ORTHO05D000228 6.7e-27 125.9 396 31.8
Atru.chr6.728 Acer truncatum HOM05D000350 ORTHO05D000228 6.7e-27 125.9 396 31.8
Thecc.08G186000 Theobroma cacao HOM05D000350 ORTHO05D000228 8.7e-27 125.6 389 34.7
Duzib177G0411 Durio zibethinus HOM05D000350 ORTHO05D000228 1.9e-26 124.4 417 32.1
MELO3C011835.2 Cucumis melo HOM05D000350 ORTHO05D000228 4.3e-26 123.2 411 33.3
Ca_00051_v3 Cicer arietinum L. HOM05D000350 ORTHO05D000228 5.6e-26 122.9 380 33.2
Solyc01g103780.4 Solanum lycopersicum HOM05D000350 ORTHO05D000228 1.3e-25 121.7 317 37.5
Cpa.g.sc66.26 Carica papaya HOM05D000350 ORTHO05D000228 1.6e-25 121.3 353 32.0
TAR624G0893 Trochodendron aralioides HOM05D000350 ORTHO05D000228 2.1e-25 120.9 239 41.4
CANSAT54G2211 Cannabis sativa HOM05D000350 ORTHO05D000228 2.8e-25 120.6 426 33.3
Potri.019G081800 Populus trichocarpa HOM05D000350 ORTHO05D000228 1.4e-24 118.2 453 31.3
Peaxi162Scf00011g00819 Petunia axillaris HOM05D000350 ORTHO05D000228 1.8e-24 117.9 332 35.2
Psat1g221880 Pisum sativum HOM05D000350 ORTHO05D000228 1.8e-24 117.9 423 31.9
Potri.013G110700 Populus trichocarpa HOM05D000350 ORTHO05D000228 1.5e-23 114.8 450 30.7
unitig_578.g16347 Utricularia gibba HOM05D000350 ORTHO05D000228 1.5e-23 114.8 297 37.4
SGA_v2.0_scaffold338G49243 Striga asiatica HOM05D000350 ORTHO05D000228 3.4e-23 113.6 410 31.7
Sabra13G0094600 Salix brachista HOM05D000350 ORTHO05D000228 2.9e-22 110.5 450 30.9
PGR042G1746 Punica granatum HOM05D000350 ORTHO05D000228 1.2e-20 105.1 397 30.2
Manes.18G103100 Manihot esculenta HOM05D000350 ORTHO05D000228 1.6e-20 104.8 435 31.5
MSTRG.25458 Avicennia marina HOM05D000350 ORTHO05D000228 6.0e-20 102.8 386 30.8
GSVIVG01023283001 Vitis vinifera HOM05D000350 ORTHO05D000228 6.0e-20 102.8 345 31.6
CARHR053950 Cardamine hirsuta HOM05D000350 ORTHO05D000228 1.5e-18 98.2 359 32.0
Migut.C01285 Erythranthe guttata HOM05D000350 ORTHO05D000228 4.3e-18 96.7 336 29.8
Ciclev10000702m.g Citrus clementina HOM05D000350 ORTHO05D000228 5.6e-18 96.3 381 30.7
Nitab4.5_0000365g0240 Nicotiana tabacum HOM05D000350 ORTHO05D000228 5.6e-18 96.3 383 29.8
Aqoxy6G00142 Aquilegia oxysepala HOM05D000350 ORTHO05D000228 7.4e-18 95.9 265 34.0
Nitab4.5_0001082g0060 Nicotiana tabacum HOM05D000350 ORTHO05D000228 1.6e-17 94.7 295 32.2
SGA_v2.0_scaffold24G10586 Striga asiatica HOM05D000350 ORTHO05D000228 1.6e-17 94.7 332 31.6
HPP92_016135 Vanilla planifolia HOM05D000350 ORTHO05D000228 3.7e-17 93.6 304 32.9
Dinv15058 Davidia involucrata HOM05D000350 ORTHO05D000228 4.8e-17 93.2 198 34.8
AT1G58100 Arabidopsis thaliana HOM05D000350 ORTHO05D000228 1.1e-16 92.0 354 30.2
Oeu049819.1 Olea europaea HOM05D000350 ORTHO05D000228 1.8e-16 91.3 238 32.8
Oeu045941.1 Olea europaea HOM05D000350 ORTHO05D000228 2.4e-16 90.9 323 33.7
Cc00_g06580 Coffea canephora HOM05D000350 ORTHO05D000228 3.1e-16 90.5 392 30.1
Oeu021221.1 Olea europaea HOM05D000350 ORTHO05D000228 3.1e-16 90.5 425 29.4
PGSC0003DMG400009276 Solanum tuberosum HOM05D000350 ORTHO05D000228 3.1e-16 90.5 400 31.0
THA.LOC104823695 Tarenaya hassleriana HOM05D000350 ORTHO05D000228 3.1e-16 90.5 351 29.1
Oeu039152.1 Olea europaea HOM05D000350 ORTHO05D000228 4.0e-16 90.1 447 27.1
CARHR064820 Cardamine hirsuta HOM05D000350 ORTHO05D000228 5.3e-16 89.7 374 29.9
Nitab4.5_0000303g0270 Nicotiana tabacum HOM05D000350 ORTHO05D000228 6.9e-16 89.4 388 29.9
Eucgr.F02587 Eucalyptus grandis HOM05D000350 ORTHO05D000228 1.2e-15 88.6 431 27.6
Nitab4.5_0009198g0010 Nicotiana tabacum HOM05D000350 ORTHO05D000228 1.2e-15 88.6 424 29.5
Pp3c10_14310 Physcomitrium patens HOM05D000350 ORTHO05D000228 2.0e-15 87.8 410 31.5
Solyc11g020670.1 Solanum lycopersicum HOM05D000350 ORTHO05D000228 2.6e-15 87.4 388 30.9
DCAR_025352 Daucus carota HOM05D000350 ORTHO05D000228 4.5e-15 86.7 403 28.5
Peaxi162Scf00391g00048 Petunia axillaris HOM05D000350 ORTHO05D000228 5.8e-15 86.3 423 30.7
Aa31LG4G8600 Aethionema arabicum HOM05D000350 ORTHO05D000228 1.3e-14 85.1 373 29.0
A09p18560 Brassica napus HOM05D000350 ORTHO05D000228 1.3e-14 85.1 363 30.3
Carub.0002s0652 Capsella rubella HOM05D000350 ORTHO05D000228 2.9e-14 84.0 384 29.7
Sopen11g010700 Solanum pennellii HOM05D000350 ORTHO05D000228 2.9e-14 84.0 387 30.0
AT1G72010 Arabidopsis thaliana HOM05D000350 ORTHO05D000228 3.8e-14 83.6 415 28.9
BcaC04g22116 Brassica carinata HOM05D000350 ORTHO05D000228 3.8e-14 83.6 386 30.1
C09p23170 Brassica napus HOM05D000350 ORTHO05D000228 3.8e-14 83.6 386 30.1
Manes.02G194200 Manihot esculenta HOM05D000350 ORTHO05D000228 3.8e-14 83.6 379 28.8
SEGI_17926 Sequoiadendron giganteum HOM05D000350 ORTHO05D000228 3.8e-14 83.6 461 29.1
BolC9t55236H Brassica oleracea HOM05D000350 ORTHO05D000228 8.4e-14 82.4 381 30.2
BraA09t37482Z Brassica rapa HOM05D000350 ORTHO05D000228 8.4e-14 82.4 386 29.8
Solyc06g065190.1 Solanum lycopersicum HOM05D000350 ORTHO05D000228 8.4e-14 82.4 335 27.2
Sopen06g023690 Solanum pennellii HOM05D000350 ORTHO05D000228 8.4e-14 82.4 330 27.0
PGSC0003DMG400026105 Solanum tuberosum HOM05D000350 ORTHO05D000228 1.4e-13 81.6 335 27.2
Mapoly0068s0102 Marchantia polymorpha HOM05D000350 ORTHO05D000228 2.5e-13 80.9 280 35.0
TPR.G2073 Trifolium pratense HOM05D000350 ORTHO05D000228 3.2e-13 80.5 188 35.1
AL2G31640 Arabidopsis lyrata HOM05D000350 ORTHO05D000228 5.5e-13 79.7 408 28.4
AT1G35560 Arabidopsis thaliana HOM05D000350 ORTHO05D000228 6.0e-12 76.3 417 28.3
Thhalv10001860m.g Eutrema salsugineum HOM05D000350 ORTHO05D000228 6.0e-12 76.3 384 28.4
AL1G50420 Arabidopsis lyrata HOM05D000350 ORTHO05D000228 7.9e-12 75.9 356 29.8
Pp3c10_20400 Physcomitrium patens HOM05D000350 ORTHO05D000228 7.9e-12 75.9 470 29.1
Sp5g27080 Schrenkiella parvula HOM05D000350 ORTHO05D000228 7.9e-12 75.9 367 26.7
Carub.0002s1879 Capsella rubella HOM05D000350 ORTHO05D000228 1.0e-11 75.5 353 28.6
Pp3c3_24660 Physcomitrium patens HOM05D000350 ORTHO05D000228 1.3e-11 75.1 477 26.2
AagrBONN_evm.TU.Sc2ySwM_344.85 Anthoceros agrestis HOM05D026980 ORTHO05D000228 3.0e-11 73.9 366 29.8
Oeu024889.1 Olea europaea HOM05D000350 ORTHO05D000228 3.9e-11 73.6 347 29.7
Peaxi162Scf00268g00069 Petunia axillaris HOM05D000350 ORTHO05D000228 6.7e-11 72.8 202 29.7
SEGI_33313 Sequoiadendron giganteum HOM05D000350 ORTHO05D000228 1.1e-10 72.0 477 26.8
CSS0010873 Camellia sinensis var. sinensis HOM05D000350 ORTHO05D000228 1.5e-10 71.6 348 27.3
A02p17620 Brassica napus HOM05D000350 ORTHO05D000228 9.7e-10 68.9 361 27.1
BraA02t06808Z Brassica rapa HOM05D000350 ORTHO05D000228 9.7e-10 68.9 364 27.2
Thhalv10023507m.g Eutrema salsugineum HOM05D000350 ORTHO05D000228 3.7e-09 67.0 385 27.5
SGA_v2.0_scaffold7G04072 Striga asiatica HOM05D000350 ORTHO05D000228 3.7e-09 67.0 348 27.9
THA.LOC104816371 Tarenaya hassleriana HOM05D000350 ORTHO05D000228 3.7e-09 67.0 382 29.3
Aa31LG2G10990 Aethionema arabicum HOM05D000350 ORTHO05D000228 4.8e-09 66.6 416 27.6
BolC6t39664H Brassica oleracea HOM05D000350 ORTHO05D000228 4.8e-09 66.6 400 27.2
Thhalv10018667m.g Eutrema salsugineum HOM05D000350 ORTHO05D000228 6.3e-09 66.2 424 25.5
THA.LOC104825333 Tarenaya hassleriana HOM05D000350 ORTHO05D000228 6.3e-09 66.2 373 26.5
BcaC03g15325 Brassica carinata HOM05D000350 ORTHO05D000228 8.2e-09 65.9 362 26.8
C02p29300 Brassica napus HOM05D000350 ORTHO05D000228 8.2e-09 65.9 362 26.8
BolC2t08981H Brassica oleracea HOM05D000350 ORTHO05D000228 8.2e-09 65.9 362 26.8
BcaB05g24699 Brassica carinata HOM05D000350 ORTHO05D000228 1.8e-08 64.7 367 27.5
C06p46110 Brassica napus HOM05D000350 ORTHO05D000228 4.1e-08 63.5 400 27.0
AL2G18050 Arabidopsis lyrata HOM05D000350 ORTHO05D000228 5.3e-08 63.2 379 26.9
CAN.G308.67 Capsicum annuum HOM05D000350 ORTHO05D000228 6.9e-08 62.8 330 25.8
BcaC08g46648 Brassica carinata HOM05D000350 ORTHO05D000228 1.2e-07 62.0 401 26.9
BraA07t31384Z Brassica rapa HOM05D000350 ORTHO05D000228 1.2e-07 62.0 395 27.1
CSS0021064 Camellia sinensis var. sinensis HOM05D000350 ORTHO05D000228 1.2e-07 62.0 348 25.6
Sp2g05480 Schrenkiella parvula HOM05D000350 ORTHO05D000228 1.3e-06 58.5 344 27.6


User provided reference genes

Program Settings