Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0136 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 6.8e-136 487.3 236 100.0
CDE04G1044 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 1.4e-128 463.0 233 95.3
Nn3g17198 Nelumbo nucifera HOM05D006345 ORTHO05D007428 3.0e-91 339.0 241 67.6
Sc05g0003040 Simmondsia chinensis HOM05D006345 ORTHO05D007428 1.1e-90 337.0 212 75.0
MBI16_g30839_MAGBIO Magnolia biondii HOM05D006345 ORTHO05D007428 1.9e-90 336.3 236 68.2
TAR624G0710 Trochodendron aralioides HOM05D006345 ORTHO05D007428 3.3e-90 335.5 240 68.8
Ca_19950_v3 Cicer arietinum L. HOM05D006345 ORTHO05D007428 4.3e-90 335.1 225 69.8
ClCG02G007550 Citrullus lanatus HOM05D006345 ORTHO05D007428 7.4e-90 334.3 215 73.5
Psat7g230920 Pisum sativum HOM05D006345 ORTHO05D007428 7.4e-90 334.3 215 72.6
Sed0021159 Sechium edule HOM05D006345 ORTHO05D007428 1.6e-89 333.2 215 72.6
MELO3C018575.2 Cucumis melo HOM05D006345 ORTHO05D007428 4.8e-89 331.6 228 69.7
Medtr4g024860 Medicago truncatula HOM05D000001 ORTHO05D000003 8.2e-89 330.9 211 73.9
CANSAT11G1250 Cannabis sativa HOM05D006345 ORTHO05D007428 1.8e-88 329.7 216 71.8
CiPaw.01G263700 Carya illinoinensis HOM05D006345 ORTHO05D007428 2.4e-88 329.3 213 71.4
TPR.G7580 Trifolium pratense HOM05D006345 ORTHO05D007428 2.4e-88 329.3 211 73.0
Dinv19690 Davidia involucrata HOM05D006345 ORTHO05D007428 5.3e-88 328.2 211 73.0
Glyma.03G027700 Glycine max HOM05D006345 ORTHO05D007428 6.9e-88 327.8 231 68.4
Sed0017834 Sechium edule HOM05D006345 ORTHO05D007428 6.9e-88 327.8 228 68.4
CSS0008102 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 9.0e-88 327.4 216 70.4
Sabra01G0052000 Salix brachista HOM05D006345 ORTHO05D007428 9.0e-88 327.4 241 65.6
Ciclev10016345m.g Citrus clementina HOM05D006345 ORTHO05D007428 1.2e-87 327.0 225 68.0
CsaV3_7G007230 Cucumis sativus L. HOM05D006345 ORTHO05D007428 2.0e-87 326.2 228 68.4
TWI53G2073 Tripterygium wilfordii HOM05D006345 ORTHO05D007428 2.0e-87 326.2 211 71.1
QL08p052794 Quercus lobata HOM05D006345 ORTHO05D007428 2.6e-87 325.9 244 63.5
Duzib212G0272 Durio zibethinus HOM05D006345 ORTHO05D007428 3.4e-87 325.5 211 71.6
VMungo1383G2204 Vigna mungo HOM05D006345 ORTHO05D007428 3.4e-87 325.5 221 70.1
Rhsim13G0136400 Rhododendron simsii HOM05D006345 ORTHO05D007428 4.5e-87 325.1 211 72.5
ECA238G2485 Erigeron canadensis HOM05D006345 ORTHO05D007428 5.8e-87 324.7 211 70.1
Phvul.003G037201 Phaseolus vulgaris HOM05D006345 ORTHO05D007428 5.8e-87 324.7 214 71.0
Glyma.01G139633 Glycine max HOM05D006345 ORTHO05D007428 7.6e-87 324.3 226 68.6
Lalb_Chr07g0189941 Lupinus albus HOM05D006345 ORTHO05D007428 1.7e-86 323.2 211 73.0
arahy.Tifrunner.gnm1.ann1.G9BQRV Arachis hypogaea HOM05D006345 ORTHO05D007428 2.2e-86 322.8 211 72.0
Prupe.4G121300 Prunus persica HOM05D006345 ORTHO05D007428 2.2e-86 322.8 211 72.5
Aqoxy7G02153 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 2.9e-86 322.4 211 70.6
Lj3g0013440 Lotus japonicus HOM05D006345 ORTHO05D007428 2.9e-86 322.4 214 71.5
arahy.Tifrunner.gnm1.ann1.S1VR06 Arachis hypogaea HOM05D006345 ORTHO05D007428 3.8e-86 322.0 211 71.6
CiPaw.14G048700 Carya illinoinensis HOM05D006345 ORTHO05D007428 3.8e-86 322.0 212 70.8
Manes.16G061100 Manihot esculenta HOM05D006345 ORTHO05D007428 5.0e-86 321.6 211 72.0
Thecc.04G283900 Theobroma cacao HOM05D006345 ORTHO05D007428 5.0e-86 321.6 227 67.4
arahy.Tifrunner.gnm1.ann1.P3RVZQ Arachis hypogaea HOM05D006345 ORTHO05D007428 6.5e-86 321.2 211 71.6
arahy.Tifrunner.gnm1.ann1.W97VC3 Arachis hypogaea HOM05D006345 ORTHO05D007428 1.9e-85 319.7 211 71.1
MD05G1242200 Malus domestica HOM05D006345 ORTHO05D007428 1.9e-85 319.7 224 67.4
HanXRQChr14g0447431 Helianthus annuus HOM05D006345 ORTHO05D007428 2.5e-85 319.3 211 69.2
Nitab4.5_0008647g0020 Nicotiana tabacum HOM05D006345 ORTHO05D007428 3.2e-85 318.9 225 68.0
SalBow7G0027 Salvia bowleyana HOM05D006345 ORTHO05D007428 4.2e-85 318.5 209 70.3
Potri.001G073700 Populus trichocarpa HOM05D006345 ORTHO05D007428 5.5e-85 318.2 211 70.6
Lalb_Chr13g0291791 Lupinus albus HOM05D006345 ORTHO05D007428 7.1e-85 317.8 212 71.7
FvH4_3g13390 Fragaria vesca HOM05D006345 ORTHO05D007428 1.2e-84 317.0 211 70.1
FAN11G3812 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.2e-84 317.0 211 70.1
FAN21G0075 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.2e-84 317.0 211 70.1
Oeu012935.1 Olea europaea HOM05D006345 ORTHO05D007428 1.6e-84 316.6 210 69.5
RcHm_v2.0_Chr5g0022101 Rosa chinensis HOM05D006345 ORTHO05D007428 1.6e-84 316.6 211 70.1
Cpa.g.sc12.137 Carica papaya HOM05D006345 ORTHO05D007428 2.1e-84 316.2 211 69.2
Nitab4.5_0001925g0110 Nicotiana tabacum HOM05D006345 ORTHO05D007428 2.7e-84 315.8 211 70.1
PGSC0003DMG400023836 Solanum tuberosum HOM05D006345 ORTHO05D007428 4.6e-84 315.1 225 66.7
MSTRG.21400 Avicennia marina HOM05D006345 ORTHO05D007428 6.1e-84 314.7 211 69.2
Migut.D00572 Erythranthe guttata HOM05D006345 ORTHO05D007428 6.1e-84 314.7 212 69.8
Gorai.011G189500 Gossypium raimondii HOM05D006345 ORTHO05D007428 6.1e-84 314.7 213 69.5
COL.COLO4_13882 Corchorus olitorius HOM05D006345 ORTHO05D007428 7.9e-84 314.3 211 69.7
CAN.G575.62 Capsicum annuum HOM05D006345 ORTHO05D007428 1.0e-83 313.9 225 66.2
Cc06_g02140 Coffea canephora HOM05D006345 ORTHO05D007428 1.0e-83 313.9 213 68.1
FAN25G2350 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.0e-83 313.9 211 69.7
Oeu017184.1 Olea europaea HOM05D006345 ORTHO05D007428 1.0e-83 313.9 211 69.7
Gohir.A10G163600 Gossypium hirsutum HOM05D006345 ORTHO05D007428 1.3e-83 313.5 213 69.0
Peaxi162Scf00062g10131 Petunia axillaris HOM05D006345 ORTHO05D007428 1.8e-83 313.2 211 69.7
HPP92_018755 Vanilla planifolia HOM05D006345 ORTHO05D007428 2.3e-83 312.8 234 63.2
Eucgr.F03783 Eucalyptus grandis HOM05D006345 ORTHO05D007428 3.9e-83 312.0 211 70.1
unitig_52.g17581 Utricularia gibba HOM05D006345 ORTHO05D007428 3.9e-83 312.0 216 69.4
Cc09_g04580 Coffea canephora HOM05D006345 ORTHO05D007428 5.1e-83 311.6 213 68.1
THA.LOC104822694 Tarenaya hassleriana HOM05D006345 ORTHO05D007428 5.1e-83 311.6 211 69.7
PGR042G3945 Punica granatum HOM05D006345 ORTHO05D007428 8.7e-83 310.8 235 62.6
FAN16G3736 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.5e-82 310.1 211 69.2
Aqoxy3G02382 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 5.7e-82 308.1 211 67.8
Gohir.D10G170000 Gossypium hirsutum HOM05D006345 ORTHO05D007428 5.7e-82 308.1 213 68.1
Os03g0824200 Oryza sativa ssp. japonica HOM05D006345 ORTHO05D007428 9.7e-82 307.4 238 62.2
Ah.15g099610 Amaranthus hybridus HOM05D006345 ORTHO05D007428 1.3e-81 307.0 230 65.2
EL10Ac3g05939 Beta vulgaris HOM05D006345 ORTHO05D007428 1.6e-81 306.6 212 67.5
DCAR_001254 Daucus carota HOM05D006345 ORTHO05D007428 2.2e-81 306.2 209 67.5
SalBow2G1193 Salvia bowleyana HOM05D006345 ORTHO05D007428 2.8e-81 305.8 209 67.5
Sopen12g034690 Solanum pennellii HOM05D006345 ORTHO05D007428 3.7e-81 305.4 211 67.8
Carub.0003s1288 Capsella rubella HOM05D006345 ORTHO05D007428 4.8e-81 305.1 211 69.2
Ah.07g202050 Amaranthus hybridus HOM05D006345 ORTHO05D007428 1.8e-80 303.1 212 68.4
Lsat_1_v5_gn_3_103240 Lactuca sativa HOM05D006345 ORTHO05D007428 2.4e-80 302.8 211 67.8
SGA_v2.0_scaffold8G04616 Striga asiatica HOM05D006345 ORTHO05D007428 2.4e-80 302.8 211 66.8
PSO675G7514 Papaver somniferum HOM05D006345 ORTHO05D007428 5.3e-80 301.6 214 69.6
ATR0561G247 Amborella trichopoda HOM05D006345 ORTHO05D007428 2.0e-79 299.7 222 67.1
AT3G13440 Arabidopsis thaliana HOM05D006345 ORTHO05D007428 2.0e-79 299.7 211 67.3
AUR62015383 Chenopodium quinoa HOM05D006345 ORTHO05D007428 2.0e-79 299.7 214 66.8
Zm00001eb211470 Zea mays HOM05D006345 ORTHO05D007428 2.6e-79 299.3 231 63.6
Carub.0006s3398 Capsella rubella HOM05D006345 ORTHO05D007428 1.3e-78 297.0 211 67.3
CARHR088090 Cardamine hirsuta HOM05D006345 ORTHO05D007428 1.3e-78 297.0 211 66.8
PSO782G3410 Papaver somniferum HOM05D006345 ORTHO05D007428 1.3e-78 297.0 214 68.7
AL3G25340 Arabidopsis lyrata HOM05D006345 ORTHO05D007428 2.9e-78 295.8 211 66.4
Thhalv10021414m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 6.5e-78 294.7 211 65.9
Aa31LG8G650 Aethionema arabicum HOM05D006345 ORTHO05D007428 8.5e-78 294.3 224 63.4
BcaC09g48312 Brassica carinata HOM05D006345 ORTHO05D007428 1.4e-77 293.5 213 64.8
C01p51620 Brassica napus HOM05D006345 ORTHO05D007428 1.4e-77 293.5 213 64.8
BolC1t05105H Brassica oleracea HOM05D006345 ORTHO05D007428 1.4e-77 293.5 213 64.8
PSO541G0968 Papaver somniferum HOM05D006345 ORTHO05D007428 3.2e-77 292.4 214 68.2
BraA05t22416Z Brassica rapa HOM05D002140 ORTHO05D007428 6.1e-76 288.1 212 65.1
A01p40130 Brassica napus HOM05D006345 ORTHO05D007428 1.0e-75 287.3 213 63.4
BraA01t04054Z Brassica rapa HOM05D006345 ORTHO05D007428 1.8e-75 286.6 213 62.9
Sp3g11640 Schrenkiella parvula HOM05D006345 ORTHO05D007428 3.9e-75 285.4 211 64.9
BcaC05g29179 Brassica carinata HOM05D002140 ORTHO05D007428 6.7e-75 284.6 210 65.2
C05p54470 Brassica napus HOM05D002140 ORTHO05D007428 6.7e-75 284.6 210 65.2
BolC5t34114H Brassica oleracea HOM05D002140 ORTHO05D007428 6.7e-75 284.6 210 65.2
A05p36090 Brassica napus HOM05D002140 ORTHO05D007428 8.8e-75 284.3 212 64.2
SHI16738 Sapria himalayana HOM05D006345 ORTHO05D007428 1.1e-74 283.9 209 66.5
BcaB04g21015 Brassica carinata HOM05D006345 ORTHO05D007428 2.5e-74 282.7 211 63.0
Mapoly0069s0066 Marchantia polymorpha HOM05D006345 ORTHO05D007428 9.1e-72 274.2 214 61.2
Pp3c9_17440 Physcomitrium patens HOM05D006345 ORTHO05D007428 7.7e-71 271.2 211 61.6
Lsat_1_v5_gn_2_63801 Lactuca sativa HOM05D006345 ORTHO05D007428 3.2e-69 265.8 213 61.5
CBR_g45447 Chara braunii HOM05D006345 ORTHO05D007428 6.1e-68 261.5 209 59.3
SMO358G0200 Selaginella moellendorffii HOM05D006345 ORTHO05D007428 5.1e-67 258.5 210 61.0
AagrBONN_evm.TU.Sc2ySwM_117.4015 Anthoceros agrestis HOM05D006345 ORTHO05D007428 1.1e-66 257.3 211 56.9
Solyc12g100070.3 Solanum lycopersicum HOM05D006345 ORTHO05D007428 2.6e-66 256.1 177 67.2
Thhalv10009961m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 1.7e-65 253.4 213 58.7
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 6.3e-65 251.5 186 65.1
AUR62002307 Chenopodium quinoa HOM05D006345 ORTHO05D007428 1.5e-63 246.9 214 58.4
SEGI_21458 Sequoiadendron giganteum HOM05D006345 ORTHO05D007428 9.1e-56 221.1 163 67.5
Zm00001eb141630 Zea mays HOM05D006345 ORTHO05D007428 7.7e-47 191.4 144 64.6
Cre01.g036750 Chlamydomonas reinhardtii HOM05D006345 ORTHO05D007428 1.9e-45 186.8 218 46.8
CAN.G1126.44 Capsicum annuum HOM05D006345 ORTHO05D007428 3.7e-41 172.6 159 53.5
Potri.003G157201 Populus trichocarpa HOM05D006345 ORTHO05D007428 2.3e-35 153.3 114 64.0
CSS0000171 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 2.9e-33 146.4 101 65.3
MCO02G297 Micromonas commoda HOM05D006345 ORTHO05D007428 2.9e-33 146.4 172 45.3
Zm00001eb356470 Zea mays HOM05D006345 ORTHO05D007428 6.6e-30 135.2 103 62.1
Sabra03G0114100 Salix brachista HOM05D000029 ORTHO05D000854 2.4e-24 116.7 188 38.8
ATR0006G036 Amborella trichopoda HOM05D006345 ORTHO05D007428 7.6e-10 68.6 47 66.0


User provided reference genes

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