Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0120 Ceratophyllum demersum HOM05D006276 ORTHO05D007724 1.7e-185 652.5 324 100.0
CDE04G1132 Ceratophyllum demersum HOM05D000032 ORTHO05D002561 1.2e-143 513.5 277 91.7
TAR626G0576 Trochodendron aralioides HOM05D006276 ORTHO05D007724 1.7e-89 333.6 327 54.1
TAR383G0425 Trochodendron aralioides HOM05D006276 ORTHO05D007724 2.3e-89 333.2 327 56.0
GSVIVG01035412001 Vitis vinifera HOM05D006276 ORTHO05D007724 5.2e-86 322.0 325 54.5
Ciclev10008931m.g Citrus clementina HOM05D006276 ORTHO05D007724 4.6e-82 308.9 325 51.1
Dinv27981 Davidia involucrata HOM05D006276 ORTHO05D007724 4.6e-82 308.9 327 52.9
Manes.16G079900 Manihot esculenta HOM05D006276 ORTHO05D007724 5.0e-81 305.4 325 52.0
PSO210G3453 Papaver somniferum HOM05D006276 ORTHO05D007724 5.0e-81 305.4 327 53.5
QL02p001268 Quercus lobata HOM05D006276 ORTHO05D007724 6.6e-81 305.1 324 50.0
Lalb_Chr14g0367711 Lupinus albus HOM05D006276 ORTHO05D007724 1.5e-80 303.9 326 52.8
CiPaw.16G028900 Carya illinoinensis HOM05D006276 ORTHO05D007724 3.3e-80 302.8 325 53.8
Hma1.2p1_0482F.1_g162490 Hydrangea macrophylla HOM05D006276 ORTHO05D007724 1.6e-79 300.4 325 48.9
RcHm_v2.0_Chr6g0310851 Rosa chinensis HOM05D006276 ORTHO05D007724 2.1e-79 300.1 325 52.3
Eucgr.C03044 Eucalyptus grandis HOM05D006276 ORTHO05D007724 2.8e-79 299.7 326 51.2
RcHm_v2.0_Chr6g0290791 Rosa chinensis HOM05D006276 ORTHO05D007724 4.7e-79 298.9 325 51.4
Aqoxy5G01259 Aquilegia oxysepala HOM05D006276 ORTHO05D007724 1.1e-78 297.7 325 50.8
Potri.006G230000 Populus trichocarpa HOM05D006276 ORTHO05D007724 8.9e-78 294.7 325 51.4
Thecc.09G053300 Theobroma cacao HOM05D006276 ORTHO05D007724 1.2e-77 294.3 325 48.6
CsaV3_2G025580 Cucumis sativus L. HOM05D006276 ORTHO05D007724 1.5e-77 293.9 325 49.5
PSO210G2260 Papaver somniferum HOM05D006276 ORTHO05D007724 2.0e-77 293.5 327 52.0
ClCG08G017020 Citrullus lanatus HOM05D006276 ORTHO05D007724 4.4e-77 292.4 325 51.4
FvH4_2g31970 Fragaria vesca HOM05D006276 ORTHO05D007724 4.9e-76 288.9 325 50.8
Duzib168G0463 Durio zibethinus HOM05D006276 ORTHO05D007724 6.4e-76 288.5 328 48.8
MD15G1060500 Malus domestica HOM05D006276 ORTHO05D007724 1.4e-75 287.3 325 51.4
Solyc11g070020.3 Solanum lycopersicum HOM05D006276 ORTHO05D007724 1.4e-75 287.3 327 47.7
Sopen11g028700 Solanum pennellii HOM05D006276 ORTHO05D007724 1.4e-75 287.3 327 47.7
COL.COLO4_21052 Corchorus olitorius HOM05D006276 ORTHO05D007724 1.9e-75 287.0 325 49.2
PGSC0003DMG400025517 Solanum tuberosum HOM05D006276 ORTHO05D007724 1.9e-75 287.0 327 47.4
Actinidia01190 Actinidia chinensis HOM05D006276 ORTHO05D007724 4.1e-75 285.8 325 50.2
Sed0008348 Sechium edule HOM05D006276 ORTHO05D007724 5.4e-75 285.4 325 49.2
Sed0014483 Sechium edule HOM05D006276 ORTHO05D007724 9.2e-75 284.6 325 49.2
Atru.chr7.1056 Acer truncatum HOM05D006276 ORTHO05D007724 1.2e-74 284.3 327 49.8
MD08G1060900 Malus domestica HOM05D006276 ORTHO05D007724 2.1e-74 283.5 325 51.4
Ca_13170_v3 Cicer arietinum L. HOM05D006276 ORTHO05D007724 1.3e-73 280.8 327 50.2
Nitab4.5_0003550g0010 Nicotiana tabacum HOM05D006276 ORTHO05D007724 1.3e-73 280.8 325 46.5
HPP92_004831 Vanilla planifolia HOM05D006276 ORTHO05D007724 1.3e-73 280.8 332 49.1
Glyma.17G229400 Glycine max HOM05D006276 ORTHO05D007724 3.9e-73 279.3 326 50.0
CANSAT25G3436 Cannabis sativa HOM05D006276 ORTHO05D007724 5.1e-73 278.9 327 50.2
Peaxi162Scf00247g00720 Petunia axillaris HOM05D006276 ORTHO05D007724 5.1e-73 278.9 327 48.0
Lj7A273T8 Lonicera japonica HOM05D006276 ORTHO05D007724 8.6e-73 278.1 330 49.4
Gorai.009G045400 Gossypium raimondii HOM05D006276 ORTHO05D007724 1.5e-72 277.3 325 47.1
VMungo0647G0182 Vigna mungo HOM05D006276 ORTHO05D007724 4.3e-72 275.8 325 49.5
Phvul.001G034700 Phaseolus vulgaris HOM05D006276 ORTHO05D007724 5.6e-72 275.4 325 48.9
arahy.Tifrunner.gnm1.ann1.C6FL8N Arachis hypogaea HOM05D006276 ORTHO05D007724 1.6e-71 273.9 326 48.5
Nitab4.5_0001107g0140 Nicotiana tabacum HOM05D006276 ORTHO05D007724 1.6e-71 273.9 325 46.8
Sabra06G0178200 Salix brachista HOM05D006276 ORTHO05D007724 3.6e-71 272.7 372 45.4
arahy.Tifrunner.gnm1.ann1.PS3ZFP Arachis hypogaea HOM05D006276 ORTHO05D007724 6.2e-71 271.9 327 49.2
Actinidia18190 Actinidia chinensis HOM05D006276 ORTHO05D007724 8.1e-71 271.6 328 47.9
MSTRG.11659 Avicennia marina HOM05D006276 ORTHO05D007724 8.1e-71 271.6 326 45.7
DCAR_004430 Daucus carota HOM05D006276 ORTHO05D007724 8.1e-71 271.6 326 46.9
SGA_v2.0_scaffold169G38688 Striga asiatica HOM05D006276 ORTHO05D007724 8.1e-71 271.6 325 45.5
PSO478G1664 Papaver somniferum HOM05D006276 ORTHO05D007724 1.8e-70 270.4 343 47.5
TWI34G0536 Tripterygium wilfordii HOM05D006276 ORTHO05D007724 2.3e-70 270.0 325 46.2
Migut.E01562 Erythranthe guttata HOM05D006276 ORTHO05D007724 3.1e-70 269.6 325 45.8
Lj5g0000642 Lotus japonicus HOM05D006276 ORTHO05D007724 3.1e-70 269.6 326 50.3
SalBow1G4959 Salvia bowleyana HOM05D006276 ORTHO05D007724 2.6e-69 266.5 336 45.5
Cc08_g10550 Coffea canephora HOM05D006276 ORTHO05D007724 4.4e-69 265.8 328 47.9
Lsat_1_v5_gn_3_24381 Lactuca sativa HOM05D006276 ORTHO05D007724 4.4e-69 265.8 326 46.9
HanXRQChr17g0538201 Helianthus annuus HOM05D006276 ORTHO05D007724 9.9e-69 264.6 325 45.8
TPR.G13142 Trifolium pratense HOM05D006276 ORTHO05D007724 1.7e-68 263.8 326 46.6
Medtr1g016410 Medicago truncatula HOM05D006276 ORTHO05D007724 6.4e-68 261.9 331 46.5
PSO782G4309 Papaver somniferum HOM05D006276 ORTHO05D007724 2.4e-67 260.0 325 48.9
Oeu003983.2 Olea europaea HOM05D006276 ORTHO05D007724 9.2e-67 258.1 325 44.9
Rhsim07G0142500 Rhododendron simsii HOM05D006276 ORTHO05D007724 3.5e-66 256.1 328 46.3
THA.LOC104811244 Tarenaya hassleriana HOM05D006276 ORTHO05D007724 1.3e-65 254.2 326 46.0
ATR0564G292 Amborella trichopoda HOM05D006276 ORTHO05D007724 5.1e-65 252.3 299 46.8
Hund19457 Selenicereus undatus HOM05D006276 ORTHO05D007724 5.1e-65 252.3 328 44.2
Gohir.D05G044300 Gossypium hirsutum HOM05D006276 ORTHO05D007724 6.6e-65 251.9 325 44.9
FAN24G2654 Fragaria x ananassa HOM05D006276 ORTHO05D007724 8.6e-65 251.5 400 41.2
Os02g0135600 Oryza sativa ssp. japonica HOM05D006276 ORTHO05D007724 3.3e-64 249.6 341 45.2
Zm00001eb231620 Zea mays HOM05D006276 ORTHO05D007724 3.3e-64 249.6 337 44.5
Actinidia14712 Actinidia chinensis HOM05D006276 ORTHO05D007724 7.3e-64 248.4 325 44.9
EL10Ac2g03891 Beta vulgaris HOM05D006276 ORTHO05D007724 1.6e-63 247.3 326 43.6
Haze_18196 Corylus avellana HOM05D006276 ORTHO05D007724 1.4e-62 244.2 325 45.5
Nn3g20166 Nelumbo nucifera HOM05D006276 ORTHO05D007724 1.8e-62 243.8 279 48.7
AUR62022071 Chenopodium quinoa HOM05D006276 ORTHO05D007724 8.9e-62 241.5 327 45.6
Carub.0006s1034 Capsella rubella HOM05D006276 ORTHO05D007724 9.9e-61 238.0 327 43.4
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 4.2e-59 232.6 444 36.7
BraA10t44656Z Brassica rapa HOM05D006276 ORTHO05D007724 1.6e-58 230.7 327 41.9
Thhalv10014178m.g Eutrema salsugineum HOM05D006276 ORTHO05D007724 2.7e-58 229.9 326 43.3
A10p25940 Brassica napus HOM05D006276 ORTHO05D007724 6.0e-58 228.8 329 41.6
Sp6g31790 Schrenkiella parvula HOM05D006276 ORTHO05D007724 1.7e-57 227.3 329 43.2
MELO3C010755.2 Cucumis melo HOM05D006276 ORTHO05D007724 3.9e-57 226.1 326 44.5
Cfa017950 Carpinus fangiana HOM05D006276 ORTHO05D007724 5.1e-57 225.7 248 50.8
C09p65020 Brassica napus HOM05D006276 ORTHO05D007724 1.9e-56 223.8 333 42.6
AT5G11810 Arabidopsis thaliana HOM05D006276 ORTHO05D007724 3.3e-56 223.0 327 42.5
BolC9t59330H Brassica oleracea HOM05D006276 ORTHO05D007724 7.3e-56 221.9 332 42.8
AUR62009155 Chenopodium quinoa HOM05D006276 ORTHO05D007724 9.6e-56 221.5 351 41.0
AagrBONN_evm.TU.Sc2ySwM_117.3789 Anthoceros agrestis HOM05D006276 ORTHO05D007724 1.6e-55 220.7 332 40.4
BraA03t09860Z Brassica rapa HOM05D006276 ORTHO05D007724 1.6e-55 220.7 328 41.8
BcaC04g19193 Brassica carinata HOM05D006276 ORTHO05D007724 4.8e-55 219.2 334 42.8
A03p05210 Brassica napus HOM05D006276 ORTHO05D007724 1.4e-54 217.6 328 41.8
BolC3t13112H Brassica oleracea HOM05D006276 ORTHO05D007724 1.4e-54 217.6 327 40.7
SEGI_30057 Sequoiadendron giganteum HOM05D006276 ORTHO05D007724 1.4e-54 217.6 308 42.2
SHI18737 Sapria himalayana HOM05D006276 ORTHO05D007724 2.0e-53 213.8 329 38.9
C03p06010 Brassica napus HOM05D006276 ORTHO05D007724 5.8e-53 212.2 327 40.4
Sc09g0009760 Simmondsia chinensis HOM05D006276 ORTHO05D007724 3.8e-52 209.5 300 42.0
CiPaw.15G039400 Carya illinoinensis HOM05D006276 ORTHO05D007724 1.4e-51 207.6 335 40.3
Cpa.g.sc7.176 Carica papaya HOM05D006276 ORTHO05D007724 3.2e-51 206.5 230 50.4
BcaB01g05452 Brassica carinata HOM05D006276 ORTHO05D007724 5.4e-51 205.7 328 40.9
Glyma.14G094000 Glycine max HOM05D006276 ORTHO05D007724 5.4e-51 205.7 247 49.0
Gohir.A05G042600 Gossypium hirsutum HOM05D006276 ORTHO05D007724 2.7e-50 203.4 256 44.9
CSS0027263 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 4.6e-50 202.6 278 43.5
Prupe.1G412500 Prunus persica HOM05D006276 ORTHO05D007724 6.6e-49 198.7 256 45.7
Mapoly0103s0015 Marchantia polymorpha HOM05D006276 ORTHO05D007724 1.9e-48 197.2 332 37.7
Pp3c1_29470 Physcomitrium patens HOM05D006276 ORTHO05D007724 5.6e-48 195.7 334 38.3
vmacro14246 Vaccinium macrocarpon HOM05D006276 ORTHO05D007724 9.6e-48 194.9 285 42.8
Aa31LG3G15390 Aethionema arabicum HOM05D006276 ORTHO05D007724 1.3e-47 194.5 336 38.4
FAN20G3006 Fragaria x ananassa HOM05D006276 ORTHO05D007724 2.1e-47 193.7 298 43.0
PGR044G2277 Punica granatum HOM05D006276 ORTHO05D007724 2.2e-44 183.7 326 38.7
CARHR201350 Cardamine hirsuta HOM05D006276 ORTHO05D007724 4.2e-43 179.5 280 39.6
Pp3c14_20160 Physcomitrium patens HOM05D006276 ORTHO05D007724 9.3e-43 178.3 335 36.1
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 7.9e-42 175.3 398 33.7
AL6G22560 Arabidopsis lyrata HOM05D006276 ORTHO05D007724 4.3e-40 169.5 240 42.5
Ah.10g034420 Amaranthus hybridus HOM05D006276 ORTHO05D007724 8.1e-39 165.2 327 35.2
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 3.1e-38 163.3 232 43.1
Lj7P276T14 Lonicera japonica HOM05D006276 ORTHO05D007724 4.0e-38 162.9 167 52.7
Psat6g020720 Pisum sativum HOM05D006276 ORTHO05D007724 1.5e-37 161.0 201 45.3
SMO117G0325 Selaginella moellendorffii HOM05D006276 ORTHO05D007724 7.1e-35 152.1 324 33.6
Thecc.08G113900 Theobroma cacao HOM05D006276 ORTHO05D007724 6.2e-31 139.0 258 34.9
PSO210G7329 Papaver somniferum HOM05D006276 ORTHO05D007724 3.4e-29 133.3 253 38.7
Oeu018645.1 Olea europaea HOM05D006276 ORTHO05D007724 1.4e-14 84.7 55 72.7
CSS0023315 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 1.4e-09 68.2 60 56.7
CSS0029180 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 1.8e-09 67.8 57 59.6
Lj7A276T16 Lonicera japonica HOM05D006276 ORTHO05D007724 2.2e-07 60.8 49 67.3
CARHR201360 Cardamine hirsuta HOM05D006276 ORTHO05D007724 2.4e-06 57.4 46 58.7


User provided reference genes

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