Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0114 Ceratophyllum demersum HOM05D005923 ORTHO05D007376 5.7e-214 747.3 367 100.0
MBI12_g21502_MAGBIO Magnolia biondii HOM05D005923 ORTHO05D007376 8.2e-96 354.8 325 56.0
ATR0564G177 Amborella trichopoda HOM05D005923 ORTHO05D007376 8.2e-80 301.6 322 50.3
HPP92_028167 Vanilla planifolia HOM05D005923 ORTHO05D007376 5.5e-76 288.9 322 45.0
Zm00001eb398210 Zea mays HOM05D005923 ORTHO05D007376 3.7e-72 276.2 293 47.8
Mapoly0048s0028 Marchantia polymorpha HOM05D005923 ORTHO05D007376 2.6e-65 253.4 324 43.8
Ciclev10011172m.g Citrus clementina HOM05D005923 ORTHO05D007376 4.5e-62 242.7 319 40.4
EL10Ac4g10017 Beta vulgaris HOM05D005923 ORTHO05D007376 2.3e-61 240.4 312 43.6
SMO228G0200 Selaginella moellendorffii HOM05D005923 ORTHO05D007376 8.6e-61 238.4 313 42.5
AUR62014468 Chenopodium quinoa HOM05D005923 ORTHO05D007376 5.6e-60 235.7 317 42.6
Hund21927 Selenicereus undatus HOM05D005923 ORTHO05D007376 2.1e-59 233.8 346 37.9
Dinv21358 Davidia involucrata HOM05D005923 ORTHO05D007376 4.7e-59 232.6 322 41.0
AUR62034530 Chenopodium quinoa HOM05D005923 ORTHO05D007376 6.1e-59 232.3 352 40.1
Eucgr.B01459 Eucalyptus grandis HOM05D005923 ORTHO05D007376 6.1e-59 232.3 376 37.0
DCAR_031594 Daucus carota HOM05D005923 ORTHO05D007376 1.8e-58 230.7 322 39.8
Sc16g0010600 Simmondsia chinensis HOM05D005923 ORTHO05D007376 1.8e-58 230.7 334 38.6
TPR.G31231 Trifolium pratense HOM05D005923 ORTHO05D007376 6.8e-58 228.8 325 39.1
Ah.04g159240 Amaranthus hybridus HOM05D005923 ORTHO05D007376 2.0e-57 227.3 329 39.5
Gohir.D03G071400 Gossypium hirsutum HOM05D005923 ORTHO05D007376 2.0e-57 227.3 326 38.7
Gorai.003G088600 Gossypium raimondii HOM05D005923 ORTHO05D007376 2.0e-57 227.3 326 38.7
Actinidia03247 Actinidia chinensis HOM05D005923 ORTHO05D007376 2.6e-57 226.9 320 40.3
CSS0002064 Camellia sinensis var. sinensis HOM05D005923 ORTHO05D007376 3.4e-57 226.5 345 38.3
RcHm_v2.0_Chr3g0447491 Rosa chinensis HOM05D005923 ORTHO05D007376 5.7e-57 225.7 325 38.8
COL.COLO4_36605 Corchorus olitorius HOM05D005923 ORTHO05D007376 7.5e-57 225.3 330 39.4
Nitab4.5_0001003g0070 Nicotiana tabacum HOM05D005923 ORTHO05D007376 7.5e-57 225.3 323 40.6
Sed0021637 Sechium edule HOM05D005923 ORTHO05D007376 7.5e-57 225.3 338 38.2
ClCG11G012400 Citrullus lanatus HOM05D005923 ORTHO05D007376 9.8e-57 224.9 326 39.6
PGR031G2609 Punica granatum HOM05D005923 ORTHO05D007376 9.8e-57 224.9 326 39.3
THA.LOC104827232 Tarenaya hassleriana HOM05D005923 ORTHO05D007376 9.8e-57 224.9 334 38.6
CANSAT21G0310 Cannabis sativa HOM05D005923 ORTHO05D007376 2.2e-56 223.8 331 38.7
TWI18G0568 Tripterygium wilfordii HOM05D005923 ORTHO05D007376 2.2e-56 223.8 326 40.2
CiPaw.07G083600 Carya illinoinensis HOM05D005923 ORTHO05D007376 2.9e-56 223.4 321 38.9
unitig_46.g18570 Utricularia gibba HOM05D005923 ORTHO05D007376 2.9e-56 223.4 316 39.9
Ah.06g195310 Amaranthus hybridus HOM05D005923 ORTHO05D007376 3.7e-56 223.0 303 40.9
CsaV3_2G010290 Cucumis sativus L. HOM05D005923 ORTHO05D007376 3.7e-56 223.0 326 39.3
Aqoxy2G04094 Aquilegia oxysepala HOM05D005923 ORTHO05D007376 4.9e-56 222.6 356 38.2
Lj1g0007040 Lotus japonicus HOM05D005923 ORTHO05D007376 4.9e-56 222.6 328 37.5
Manes.12G002100 Manihot esculenta HOM05D005923 ORTHO05D007376 4.9e-56 222.6 324 38.3
Potri.010G180800 Populus trichocarpa HOM05D005923 ORTHO05D007376 4.9e-56 222.6 339 36.9
Sabra10G0138600 Salix brachista HOM05D005923 ORTHO05D007376 4.9e-56 222.6 339 36.6
GSVIVG01003759001 Vitis vinifera HOM05D005923 ORTHO05D007376 4.9e-56 222.6 319 39.8
Actinidia06787 Actinidia chinensis HOM05D005923 ORTHO05D007376 8.3e-56 221.9 320 38.8
Aa31LG5G13800 Aethionema arabicum HOM05D005923 ORTHO05D000304 1.8e-55 220.7 352 37.2
MSTRG.27409 Avicennia marina HOM05D005923 ORTHO05D007376 1.8e-55 220.7 322 39.8
CARHR077340 Cardamine hirsuta HOM05D005923 ORTHO05D007376 2.4e-55 220.3 324 38.9
Cpa.g.sc99.42 Carica papaya HOM05D005923 ORTHO05D007376 2.4e-55 220.3 342 37.7
QL10p015972 Quercus lobata HOM05D005923 ORTHO05D007376 2.4e-55 220.3 326 38.7
TAR365G1048 Trochodendron aralioides HOM05D005923 ORTHO05D007376 2.4e-55 220.3 354 38.1
AagrBONN_evm.TU.Sc2ySwM_344.5471 Anthoceros agrestis HOM05D005923 ORTHO05D007376 3.2e-55 219.9 327 37.3
SGA_v2.0_scaffold62G21491 Striga asiatica HOM05D005923 ORTHO05D007376 3.2e-55 219.9 334 39.5
Potri.008G077000 Populus trichocarpa HOM05D005923 ORTHO05D007376 4.1e-55 219.5 339 37.2
Thecc.05G188500 Theobroma cacao HOM05D005923 ORTHO05D007376 4.1e-55 219.5 342 36.8
HPP92_013562 Vanilla planifolia HOM05D005923 ORTHO05D007376 4.1e-55 219.5 339 37.8
Duzib128G1624 Durio zibethinus HOM05D005923 ORTHO05D007376 5.4e-55 219.2 343 36.4
Atru.chr12.1669 Acer truncatum HOM05D005923 ORTHO05D007376 7.0e-55 218.8 321 39.3
PSO732G0688 Papaver somniferum HOM05D005923 ORTHO05D007376 7.0e-55 218.8 340 37.9
Rhsim05G0165000 Rhododendron simsii HOM05D005923 ORTHO05D007376 7.0e-55 218.8 322 39.8
Cfa006234 Carpinus fangiana HOM05D005923 ORTHO05D007376 9.2e-55 218.4 328 38.4
FvH4_6g00140 Fragaria vesca HOM05D005923 ORTHO05D007376 9.2e-55 218.4 326 36.2
Lalb_Chr03g0038141 Lupinus albus HOM05D005923 ORTHO05D007376 9.2e-55 218.4 323 39.9
Psat3g105160 Pisum sativum HOM05D005923 ORTHO05D007376 9.2e-55 218.4 320 38.1
arahy.Tifrunner.gnm1.ann1.51VLQD Arachis hypogaea HOM05D005923 ORTHO05D007376 1.2e-54 218.0 332 40.1
Glyma.18G244700 Glycine max HOM05D005923 ORTHO05D007376 1.2e-54 218.0 321 40.5
Carub.0003s0247 Capsella rubella HOM05D005923 ORTHO05D007376 1.6e-54 217.6 338 37.6
Ca_08014_v3 Cicer arietinum L. HOM05D005923 ORTHO05D007376 1.6e-54 217.6 339 36.3
Sabra08G0057400 Salix brachista HOM05D005923 ORTHO05D007376 1.6e-54 217.6 356 35.7
Haze_04596 Corylus avellana HOM05D005923 ORTHO05D007376 2.7e-54 216.9 329 38.0
PSO675G7036 Papaver somniferum HOM05D005923 ORTHO05D007376 3.5e-54 216.5 329 38.6
MD12G1262500 Malus domestica HOM05D005923 ORTHO05D007376 6.0e-54 215.7 326 36.8
HanXRQChr10g0283011 Helianthus annuus HOM05D005923 ORTHO05D007376 7.8e-54 215.3 293 39.6
arahy.Tifrunner.gnm1.ann1.VQ08NH Arachis hypogaea HOM05D005923 ORTHO05D007376 1.0e-53 214.9 332 38.6
Thhalv10020144m.g Eutrema salsugineum HOM05D005923 ORTHO05D007376 1.3e-53 214.5 342 38.3
Glyma.09G248100 Glycine max HOM05D005923 ORTHO05D007376 1.7e-53 214.2 314 40.4
Migut.F02096 Erythranthe guttata HOM05D005923 ORTHO05D007376 2.3e-53 213.8 316 40.8
C05p63470 Brassica napus HOM05D005923 ORTHO05D007376 3.0e-53 213.4 338 37.0
Medtr7g080490 Medicago truncatula HOM05D005923 ORTHO05D007376 3.0e-53 213.4 326 36.8
Gohir.A02G106500 Gossypium hirsutum HOM05D005923 ORTHO05D007376 3.9e-53 213.0 311 39.2
A05p43880 Brassica napus HOM05D005923 ORTHO05D007376 5.0e-53 212.6 338 36.4
BraA05t23125Z Brassica rapa HOM05D005923 ORTHO05D007376 5.0e-53 212.6 338 36.4
MBI08_g20603_MAGBIO Magnolia biondii HOM05D005923 ORTHO05D007376 6.6e-53 212.2 349 37.2
CDE09G0389 Ceratophyllum demersum HOM05D005923 ORTHO05D007376 8.6e-53 211.8 324 37.0
AT3G03305 Arabidopsis thaliana HOM05D005923 ORTHO05D007376 1.1e-52 211.5 339 36.9
Oeu034703.2 Olea europaea HOM05D005923 ORTHO05D007376 1.1e-52 211.5 314 40.4
BolC5t35012H Brassica oleracea HOM05D005923 ORTHO05D007376 1.5e-52 211.1 338 36.7
Sopen11g004360 Solanum pennellii HOM05D005923 ORTHO05D007376 1.5e-52 211.1 356 36.0
Prupe.6G364500 Prunus persica HOM05D005923 ORTHO05D007376 1.9e-52 210.7 324 36.7
PGSC0003DMG400016251 Solanum tuberosum HOM05D005923 ORTHO05D007376 1.9e-52 210.7 369 35.8
AL3G12930 Arabidopsis lyrata HOM05D005923 ORTHO05D007376 2.5e-52 210.3 339 36.6
Lsat_1_v5_gn_0_14641 Lactuca sativa HOM05D005923 ORTHO05D007376 2.5e-52 210.3 308 37.7
ECA232G3428 Erigeron canadensis HOM05D005923 ORTHO05D007376 4.3e-52 209.5 312 35.6
Sp3g02330 Schrenkiella parvula HOM05D005923 ORTHO05D007376 4.3e-52 209.5 339 36.9
Cc09_g04040 Coffea canephora HOM05D005923 ORTHO05D007376 5.6e-52 209.1 323 39.6
Zm00001eb144980 Zea mays HOM05D005923 ORTHO05D007376 5.6e-52 209.1 325 36.6
Phvul.008G051900 Phaseolus vulgaris HOM05D005923 ORTHO05D007376 7.3e-52 208.8 328 37.2
Peaxi162Scf00296g01112 Petunia axillaris HOM05D005923 ORTHO05D007376 9.5e-52 208.4 356 36.2
CAN.G321.22 Capsicum annuum HOM05D005923 ORTHO05D007376 2.1e-51 207.2 314 37.6
Os07g0274100 Oryza sativa ssp. japonica HOM05D005923 ORTHO05D007376 2.1e-51 207.2 324 38.0
Pp3c23_21040 Physcomitrium patens HOM05D005923 ORTHO05D007376 3.6e-51 206.5 308 39.9
VMungo1383G0851 Vigna mungo HOM05D005923 ORTHO05D007376 2.3e-50 203.8 325 38.2
Pp3c8_13610 Physcomitrium patens HOM05D005923 ORTHO05D007376 4.0e-50 203.0 334 37.4
Os01g0894000 Oryza sativa ssp. japonica HOM05D005923 ORTHO05D007376 6.8e-50 202.2 338 35.2
SalBow1G7804 Salvia bowleyana HOM05D005923 ORTHO05D007376 6.8e-50 202.2 317 36.9
ATR0824G241 Amborella trichopoda HOM05D005923 ORTHO05D007376 8.9e-50 201.8 338 36.4
SalBow1G1244 Salvia bowleyana HOM05D005923 ORTHO05D007376 1.2e-49 201.4 317 37.5
BcaC05g30305 Brassica carinata HOM05D000399 ORTHO05D000304 7.3e-44 182.2 315 36.5
Nitab4.5_0009631g0020 Nicotiana tabacum HOM05D005923 ORTHO05D007376 6.8e-42 175.6 202 46.5
Solyc11g008570.2 Solanum lycopersicum HOM05D005923 ORTHO05D007376 6.4e-40 169.1 356 32.3
MELO3C008611.2 Cucumis melo HOM05D005923 ORTHO05D007376 4.1e-39 166.4 196 43.4
arahy.Tifrunner.gnm1.ann1.25XALN Arachis hypogaea HOM05D005923 ORTHO05D007376 5.1e-37 159.5 323 32.5
Atru.chr12.1657 Acer truncatum HOM05D005923 ORTHO05D007376 2.5e-36 157.1 299 34.1
Pp3c20_18430 Physcomitrium patens HOM05D005923 ORTHO05D007376 1.2e-35 154.8 265 35.5
Lj8A198T52 Lonicera japonica HOM05D005923 ORTHO05D007376 6.8e-34 149.1 261 36.0
Actinidia06786 Actinidia chinensis HOM05D005923 ORTHO05D007376 7.6e-33 145.6 266 35.3
MD04G1248100 Malus domestica HOM05D005923 ORTHO05D007376 1.3e-32 144.8 234 35.0
CDE07G1004 Ceratophyllum demersum HOM05D000083 ORTHO05D018952 2.0e-25 120.9 96 68.8
Atru.chr12.1695 Acer truncatum HOM05D005923 ORTHO05D007376 2.1e-14 84.3 99 46.5
vmacro19542 Vaccinium macrocarpon HOM05D005923 ORTHO05D007376 5.6e-12 76.3 146 36.3
Cre11.g478456 Chlamydomonas reinhardtii HOM05D005923 ORTHO05D007376 2.9e-08 63.9 186 29.0
CDE02G4030 Ceratophyllum demersum HOM05D005923 ORTHO05D000203 2.4e-07 60.8 65 43.1
Nn013s41460 Nelumbo nucifera HOM05D005923 ORTHO05D007376 3.2e-07 60.5 97 35.1


User provided reference genes

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