Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0110 Ceratophyllum demersum HOM05D025459 ORTHO05D004682 0.0e+00 1447.2 713 100.0
CDE04G0305 Ceratophyllum demersum HOM05D025459 ORTHO05D004682 2.0e-207 726.5 696 59.2
CDE04G0287 Ceratophyllum demersum HOM05D025459 ORTHO05D004682 2.0e-106 391.0 347 63.7
CDE04G3612 Ceratophyllum demersum HOM05D025459 ORTHO05D004682 9.4e-72 275.8 259 59.5
TAR636G2104 Trochodendron aralioides HOM05D005345 ORTHO05D004682 1.0e-09 69.7 167 28.7
AUR62030590 Chenopodium quinoa HOM05D005345 ORTHO05D004682 3.3e-08 64.7 54 55.6
Lsat_1_v5_gn_2_126680 Lactuca sativa HOM05D005345 ORTHO05D004682 5.6e-08 63.9 163 32.5
TWI09G1031 Tripterygium wilfordii HOM05D005345 ORTHO05D004682 5.6e-08 63.9 66 42.4
Manes.10G003400 Manihot esculenta HOM05D005345 ORTHO05D004682 7.3e-08 63.5 342 26.3
EL10Ac5g10466 Beta vulgaris HOM05D005345 ORTHO05D004682 9.6e-08 63.2 52 50.0
Eucgr.J00102 Eucalyptus grandis HOM05D005345 ORTHO05D004682 1.6e-07 62.4 117 33.3
GSVIVG01032655001 Vitis vinifera HOM05D005345 ORTHO05D004682 1.6e-07 62.4 53 50.9
SGA_v2.0_scaffold60G20878 Striga asiatica HOM05D005345 ORTHO05D004682 2.1e-07 62.0 73 39.7
DCAR_020155 Daucus carota HOM05D005345 ORTHO05D004682 2.8e-07 61.6 117 31.6
PGSC0003DMG400022956 Solanum tuberosum HOM05D005345 ORTHO05D004682 2.8e-07 61.6 57 52.6
Sopen03g025560 Solanum pennellii HOM05D005345 ORTHO05D004682 3.6e-07 61.2 87 40.2
SGA_v2.0_scaffold44G16618 Striga asiatica HOM05D005345 ORTHO05D004682 3.6e-07 61.2 81 37.0
TWI53G1830 Tripterygium wilfordii HOM05D005345 ORTHO05D004682 3.6e-07 61.2 72 37.5
ATR1100G028 Amborella trichopoda HOM05D002045 ORTHO05D002014 4.8e-07 60.8 116 35.3
AUR62024949 Chenopodium quinoa HOM05D005345 ORTHO05D004682 4.8e-07 60.8 46 54.3
RcHm_v2.0_Chr1g0359001 Rosa chinensis HOM05D002045 ORTHO05D002014 1.1e-06 59.7 78 41.0
Dinv34499 Davidia involucrata HOM05D005345 ORTHO05D004682 1.4e-06 59.3 86 36.0
GSVIVG01027058001 Vitis vinifera HOM05D002045 ORTHO05D002014 1.4e-06 59.3 44 52.3
MELO3C016307.2 Cucumis melo HOM05D002045 ORTHO05D002014 1.8e-06 58.9 117 31.6
PSO135G1064 Papaver somniferum HOM05D002045 ORTHO05D002014 1.8e-06 58.9 40 55.0
Peaxi162Scf00073g00227 Petunia axillaris HOM05D005345 ORTHO05D004682 1.8e-06 58.9 69 42.0
MSTRG.8382 Avicennia marina HOM05D005345 ORTHO05D004682 2.4e-06 58.5 91 37.4
Glyma.06G141400 Glycine max HOM05D005345 ORTHO05D004682 2.4e-06 58.5 72 40.3
Rhsim05G0036500 Rhododendron simsii HOM05D005345 ORTHO05D004682 2.4e-06 58.5 93 36.6
HPP92_014261 Vanilla planifolia HOM05D025459 ORTHO05D004682 2.4e-06 58.5 57 45.6
CSS0024314 Camellia sinensis var. sinensis HOM05D005345 ORTHO05D004682 3.1e-06 58.2 89 37.1
FAN01G0631 Fragaria x ananassa HOM05D002045 ORTHO05D002014 3.1e-06 58.2 78 39.7
FAN03G0742 Fragaria x ananassa HOM05D002045 ORTHO05D002014 4.0e-06 57.8 65 43.1
FAN06G0660 Fragaria x ananassa HOM05D002045 ORTHO05D002014 4.0e-06 57.8 78 39.7
FAN06G2868 Fragaria x ananassa HOM05D002045 ORTHO05D002014 4.0e-06 57.8 78 39.7
FAN10G1849 Fragaria x ananassa HOM05D002045 ORTHO05D002014 4.0e-06 57.8 78 39.7
FAN10G4210 Fragaria x ananassa HOM05D002045 ORTHO05D002014 4.0e-06 57.8 78 39.7
Manes.05G025300 Manihot esculenta HOM05D002045 ORTHO05D002014 4.0e-06 57.8 113 32.7
QL08p065100 Quercus lobata HOM05D005345 ORTHO05D004682 4.0e-06 57.8 81 34.6
HanXRQChr17g0562091 Helianthus annuus HOM05D002045 ORTHO05D002014 5.3e-06 57.4 88 37.5
RcHm_v2.0_Chr1g0372591 Rosa chinensis HOM05D005345 ORTHO05D004682 5.3e-06 57.4 154 31.8
CAN.G1229.5 Capsicum annuum HOM05D005345 ORTHO05D004682 6.9e-06 57.0 70 47.1
Cpa.g.c29045.1 Carica papaya HOM05D002045 ORTHO05D002014 6.9e-06 57.0 101 33.7
CDE06G2101 Ceratophyllum demersum HOM05D002045 ORTHO05D002014 6.9e-06 57.0 62 46.8
Ciclev10030619m.g Citrus clementina HOM05D005345 ORTHO05D004682 6.9e-06 57.0 71 36.6
Glyma.19G254200 Glycine max HOM05D002045 ORTHO05D002014 6.9e-06 57.0 94 35.1
MD01G1169800 Malus domestica HOM05D005345 ORTHO05D004682 6.9e-06 57.0 82 37.8
TPR.G4779 Trifolium pratense HOM05D002045 ORTHO05D002014 6.9e-06 57.0 96 36.5
HPP92_024982 Vanilla planifolia HOM05D005345 ORTHO05D004682 6.9e-06 57.0 249 26.5


User provided reference genes

Program Settings