Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0101 Ceratophyllum demersum HOM05D042561 ORTHO05D004346 4.5e-266 921.4 751 100.0
CDE02G3207 Ceratophyllum demersum HOM05D042561 ORTHO05D004346 3.1e-118 430.3 463 61.8
Haze_13639 Corylus avellana HOM05D003806 ORTHO05D004346 2.5e-14 85.1 146 39.0
Cfa023525 Carpinus fangiana HOM05D003806 ORTHO05D004346 7.2e-14 83.6 146 38.4
CiPaw.04G076200 Carya illinoinensis HOM05D003806 ORTHO05D004346 5.7e-11 73.9 146 36.3
THA.LOC104816049 Tarenaya hassleriana HOM05D003806 ORTHO05D004346 5.7e-11 73.9 146 37.7
Sc23g0004300 Simmondsia chinensis HOM05D003806 ORTHO05D004346 1.7e-10 72.4 149 36.2
Atru.chr8.989 Acer truncatum HOM05D003806 ORTHO05D004346 6.3e-10 70.5 146 35.6
CANSAT64G1444 Cannabis sativa HOM05D003806 ORTHO05D004346 3.1e-09 68.2 124 37.1
Oeu003096.1 Olea europaea HOM05D003806 ORTHO05D004346 4.1e-09 67.8 133 36.1
HanXRQChr06g0171661 Helianthus annuus HOM05D003806 ORTHO05D004346 1.2e-08 66.2 160 32.5
QL04p061548 Quercus lobata HOM05D003806 ORTHO05D004346 1.2e-08 66.2 116 37.1
Aqoxy1G01455 Aquilegia oxysepala HOM05D003806 ORTHO05D004346 1.6e-08 65.9 130 36.9
CDE02G3965 Ceratophyllum demersum HOM05D003806 ORTHO05D004346 2.0e-08 65.5 146 34.2
MBI02_g35832_MAGBIO Magnolia biondii HOM05D003806 ORTHO05D004346 2.0e-08 65.5 192 30.2
RcHm_v2.0_Chr2g0153621 Rosa chinensis HOM05D003806 ORTHO05D004346 3.5e-08 64.7 109 41.3
Rhsim12G0014400 Rhododendron simsii HOM05D003806 ORTHO05D004346 5.9e-08 63.9 111 39.6
Sabra16G0020700 Salix brachista HOM05D003806 ORTHO05D004346 7.7e-08 63.5 146 35.6
Sabra16G0025500 Salix brachista HOM05D003806 ORTHO05D004346 7.7e-08 63.5 146 35.6
CiPaw.03G113300 Carya illinoinensis HOM05D003806 ORTHO05D004346 1.3e-07 62.8 242 29.3
FAN05G0560 Fragaria x ananassa HOM05D003806 ORTHO05D004346 1.7e-07 62.4 102 42.2
Oeu048050.1 Olea europaea HOM05D003806 ORTHO05D004346 1.7e-07 62.4 133 34.6
CSS0042337 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 2.3e-07 62.0 145 33.8
Cc05_g00050 Coffea canephora HOM05D003806 ORTHO05D004346 2.3e-07 62.0 107 40.2
FAN09G2907 Fragaria x ananassa HOM05D003806 ORTHO05D004346 2.3e-07 62.0 102 42.2
Gohir.A11G156200 Gossypium hirsutum HOM05D003806 ORTHO05D004346 6.5e-07 60.5 161 33.5
Duzib138G1777 Durio zibethinus HOM05D003806 ORTHO05D004346 8.6e-07 60.1 241 31.1
Gohir.D11G163300 Gossypium hirsutum HOM05D003806 ORTHO05D004346 8.6e-07 60.1 161 33.5
Lj3g0015803 Lotus japonicus HOM05D003806 ORTHO05D004346 8.6e-07 60.1 234 29.9
Prupe.3G186800 Prunus persica HOM05D003806 ORTHO05D004346 8.6e-07 60.1 235 27.7
Gorai.007G174000 Gossypium raimondii HOM05D003806 ORTHO05D004346 1.5e-06 59.3 167 33.5
PSO675G3405 Papaver somniferum HOM05D003806 ORTHO05D004346 1.5e-06 59.3 227 26.9
Eucgr.A00904 Eucalyptus grandis HOM05D003806 ORTHO05D004346 2.5e-06 58.5 111 36.0
arahy.Tifrunner.gnm1.ann1.LI5V6E Arachis hypogaea HOM05D003806 ORTHO05D004346 3.2e-06 58.2 243 28.4
Thhalv10016148m.g Eutrema salsugineum HOM05D003806 ORTHO05D004346 3.2e-06 58.2 169 32.0
Potri.016G018700 Populus trichocarpa HOM05D003806 ORTHO05D004346 3.2e-06 58.2 167 29.3
FAN02G2860 Fragaria x ananassa HOM05D003806 ORTHO05D004346 4.2e-06 57.8 104 39.4
Manes.09G072900 Manihot esculenta HOM05D003806 ORTHO05D004346 4.2e-06 57.8 117 37.6
arahy.Tifrunner.gnm1.ann1.TP1CMR Arachis hypogaea HOM05D003806 ORTHO05D004346 5.5e-06 57.4 243 28.4
Cpa.g.sc8.294 Carica papaya HOM05D003806 ORTHO05D004346 9.5e-06 56.6 231 26.4
Lalb_Chr19g0139591 Lupinus albus HOM05D003806 ORTHO05D004346 9.5e-06 56.6 254 28.3


User provided reference genes

Program Settings