Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0077 Ceratophyllum demersum HOM05D004952 ORTHO05D006131 4.3e-40 167.5 85 100.0
CDE04G1747 Ceratophyllum demersum HOM05D004952 ORTHO05D006131 2.7e-26 121.7 126 57.9
Lj4C49T7 Lonicera japonica HOM05D004952 ORTHO05D006131 1.1e-22 109.8 105 58.1
TAR381G0370 Trochodendron aralioides HOM05D004952 ORTHO05D006131 1.8e-22 109.0 125 50.4
Nn6g34572 Nelumbo nucifera HOM05D004952 ORTHO05D006131 1.2e-21 106.3 125 49.6
Sed0020372 Sechium edule HOM05D004952 ORTHO05D006131 1.2e-21 106.3 125 48.8
QL02p006188 Quercus lobata HOM05D004952 ORTHO05D006131 1.5e-21 105.9 125 49.6
ClCG05G019550 Citrullus lanatus HOM05D004952 ORTHO05D006131 2.0e-21 105.5 125 48.0
MELO3C016726.2 Cucumis melo HOM05D004952 ORTHO05D006131 2.0e-21 105.5 125 48.0
CsaV3_4G034010 Cucumis sativus L. HOM05D004952 ORTHO05D006131 2.0e-21 105.5 125 48.0
Atru.chr13.612 Acer truncatum HOM05D004952 ORTHO05D006131 2.6e-21 105.1 125 49.6
Aqoxy6G00884 Aquilegia oxysepala HOM05D004952 ORTHO05D006131 3.4e-21 104.8 125 49.6
GSVIVG01009573001 Vitis vinifera HOM05D004952 ORTHO05D006131 5.8e-21 104.0 125 49.6
Dinv39342 Davidia involucrata HOM05D004952 ORTHO05D006131 7.6e-21 103.6 125 48.8
Potri.014G184701 Populus trichocarpa HOM05D004952 ORTHO05D006131 1.3e-20 102.8 125 48.0
Sabra16G0008200 Salix brachista HOM05D004952 ORTHO05D006131 1.3e-20 102.8 125 48.0
ATR0706G013 Amborella trichopoda HOM05D004952 ORTHO05D006131 1.7e-20 102.4 126 46.0
CiPaw.16G049700 Carya illinoinensis HOM05D004952 ORTHO05D006131 1.7e-20 102.4 125 48.0
Duzib114G0971 Durio zibethinus HOM05D004952 ORTHO05D006131 1.7e-20 102.4 125 48.0
Aa31LG4G540 Aethionema arabicum HOM05D004952 ORTHO05D006131 2.2e-20 102.1 125 48.0
Manes.02G076400 Manihot esculenta HOM05D004952 ORTHO05D006131 2.2e-20 102.1 125 47.2
Manes.10G059950 Manihot esculenta HOM05D004952 ORTHO05D006131 2.2e-20 102.1 125 47.2
vmacro02786 Vaccinium macrocarpon HOM05D004952 ORTHO05D006131 2.2e-20 102.1 125 46.4
Nitab4.5_0000068g0320 Nicotiana tabacum HOM05D004952 ORTHO05D006131 2.9e-20 101.7 125 47.2
Nitab4.5_0012613g0030 Nicotiana tabacum HOM05D004952 ORTHO05D006131 2.9e-20 101.7 125 47.2
Peaxi162Scf01092g00128 Petunia axillaris HOM05D004952 ORTHO05D006131 2.9e-20 101.7 125 47.2
Actinidia03540 Actinidia chinensis HOM05D004952 ORTHO05D006131 3.8e-20 101.3 125 47.2
COL.COLO4_06475 Corchorus olitorius HOM05D004952 ORTHO05D006131 3.8e-20 101.3 125 47.2
Gohir.A10G194100 Gossypium hirsutum HOM05D004952 ORTHO05D006131 3.8e-20 101.3 125 46.4
Ciclev10000139m.g Citrus clementina HOM05D004952 ORTHO05D006131 4.9e-20 100.9 125 47.2
Cfa003370 Carpinus fangiana HOM05D004952 ORTHO05D006131 6.5e-20 100.5 125 46.4
DCAR_008784 Daucus carota HOM05D004952 ORTHO05D006131 6.5e-20 100.5 125 47.2
Eucgr.F02379 Eucalyptus grandis HOM05D004952 ORTHO05D006131 6.5e-20 100.5 125 46.4
TWI36G1022 Tripterygium wilfordii HOM05D004952 ORTHO05D006131 6.5e-20 100.5 125 47.2
Cc00_g16150 Coffea canephora HOM05D004952 ORTHO05D006131 8.4e-20 100.1 125 47.2
Medtr3g101230 Medicago truncatula HOM05D004952 ORTHO05D006131 1.4e-19 99.4 125 48.8
CAN.G371.63 Capsicum annuum HOM05D004952 ORTHO05D006131 1.9e-19 99.0 125 45.6
Thhalv10018067m.g Eutrema salsugineum HOM05D004952 ORTHO05D006131 1.9e-19 99.0 125 46.4
Os02g0523300 Oryza sativa ssp. japonica HOM05D004952 ORTHO05D006131 1.9e-19 99.0 126 43.7
Os12g0606100 Oryza sativa ssp. japonica HOM05D004952 ORTHO05D006131 1.9e-19 99.0 126 43.7
Rhsim13G0049200 Rhododendron simsii HOM05D004952 ORTHO05D006131 1.9e-19 99.0 125 46.4
Solyc04g079390.3 Solanum lycopersicum HOM05D004952 ORTHO05D006131 1.9e-19 99.0 125 45.6
Sopen04g033000 Solanum pennellii HOM05D004952 ORTHO05D006131 1.9e-19 99.0 125 45.6
BcaB02g07284 Brassica carinata HOM05D004952 ORTHO05D006131 2.5e-19 98.6 125 45.6
Gohir.D10G201200 Gossypium hirsutum HOM05D004952 ORTHO05D006131 2.5e-19 98.6 125 45.6
PGSC0003DMG400008031 Solanum tuberosum HOM05D004952 ORTHO05D006131 2.5e-19 98.6 125 45.6
CSS0007693 Camellia sinensis var. sinensis HOM05D004952 ORTHO05D006131 3.2e-19 98.2 125 47.2
CSS0028060 Camellia sinensis var. sinensis HOM05D004952 ORTHO05D006131 3.2e-19 98.2 125 47.2
Lj1g0021809 Lotus japonicus HOM05D004952 ORTHO05D006131 3.2e-19 98.2 125 48.0
Phvul.009G062500 Phaseolus vulgaris HOM05D004952 ORTHO05D006131 3.2e-19 98.2 126 46.8
Psat5g044920 Pisum sativum HOM05D004952 ORTHO05D006131 3.2e-19 98.2 125 48.0
VMungo1309G1417 Vigna mungo HOM05D004952 ORTHO05D006131 3.2e-19 98.2 125 48.0
CANSAT25G3148 Cannabis sativa HOM05D004952 ORTHO05D006131 4.2e-19 97.8 125 46.4
Carub.0001s2004 Capsella rubella HOM05D004952 ORTHO05D006131 4.2e-19 97.8 125 45.6
Sp5g35550 Schrenkiella parvula HOM05D004952 ORTHO05D006131 4.2e-19 97.8 125 45.6
SalBow7G3268 Salvia bowleyana HOM05D004952 ORTHO05D006131 5.5e-19 97.4 125 44.0
Sc18g0002370 Simmondsia chinensis HOM05D004952 ORTHO05D006131 7.1e-19 97.1 125 44.8
Ca_15974_v3 Cicer arietinum L. HOM05D004952 ORTHO05D006131 9.3e-19 96.7 125 46.4
PSO063G1848 Papaver somniferum HOM05D004952 ORTHO05D006131 9.3e-19 96.7 125 45.6
Lsat_1_v5_gn_6_69040 Lactuca sativa HOM05D004952 ORTHO05D006131 1.2e-18 96.3 125 44.8
HPP92_010073 Vanilla planifolia HOM05D004952 ORTHO05D006131 1.2e-18 96.3 124 46.0
Glyma.06G036500 Glycine max HOM05D004952 ORTHO05D006131 1.6e-18 95.9 125 46.4
Gorai.011G225900 Gossypium raimondii HOM05D004952 ORTHO05D006131 1.6e-18 95.9 125 44.8
PGR031G2121 Punica granatum HOM05D004952 ORTHO05D006131 1.6e-18 95.9 125 44.8
arahy.Tifrunner.gnm1.ann1.LUQS0S Arachis hypogaea HOM05D004952 ORTHO05D006131 2.1e-18 95.5 125 46.4
arahy.Tifrunner.gnm1.ann1.SSY1YH Arachis hypogaea HOM05D004952 ORTHO05D006131 2.1e-18 95.5 125 46.4
Hund10174 Selenicereus undatus HOM05D004952 ORTHO05D006131 2.1e-18 95.5 124 45.2
Hma1.2p1_0260F.1_g104650 Hydrangea macrophylla HOM05D004952 ORTHO05D006131 2.7e-18 95.1 125 47.2
Hma1.2p1_0260F.1_g104660 Hydrangea macrophylla HOM05D004952 ORTHO05D006131 2.7e-18 95.1 125 47.2
AT1G20570 Arabidopsis thaliana HOM05D004952 ORTHO05D006131 3.5e-18 94.7 125 45.6
BcaB05g25284 Brassica carinata HOM05D004952 ORTHO05D006131 3.5e-18 94.7 126 46.0
BcaC03g15988 Brassica carinata HOM05D004952 ORTHO05D006131 3.5e-18 94.7 126 46.0
A02p23690 Brassica napus HOM05D004952 ORTHO05D006131 3.5e-18 94.7 126 46.0
C02p37450 Brassica napus HOM05D004952 ORTHO05D006131 3.5e-18 94.7 126 46.0
BolC2t09757H Brassica oleracea HOM05D004952 ORTHO05D006131 3.5e-18 94.7 126 46.0
BraA02t07362Z Brassica rapa HOM05D004952 ORTHO05D006131 3.5e-18 94.7 126 46.0
CANSAT35G0575 Cannabis sativa HOM05D004952 ORTHO05D006131 3.5e-18 94.7 125 44.8
Cpa.g.sc64.8 Carica papaya HOM05D004952 ORTHO05D006131 3.5e-18 94.7 125 44.8
Oeu055752.1 Olea europaea HOM05D004952 ORTHO05D006131 3.5e-18 94.7 125 44.0
TPR.G26027 Trifolium pratense HOM05D004952 ORTHO05D006131 3.5e-18 94.7 125 47.2
MSTRG.25114 Avicennia marina HOM05D004952 ORTHO05D006131 4.6e-18 94.4 125 44.8
ECA240G1628 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.6e-18 94.4 125 44.8
SGA_v2.0_scaffold156G37306 Striga asiatica HOM05D004952 ORTHO05D006131 4.6e-18 94.4 125 44.8
Migut.C00614 Erythranthe guttata HOM05D004952 ORTHO05D006131 6.0e-18 94.0 125 44.0
FvH4_2g40750 Fragaria vesca HOM05D004952 ORTHO05D006131 6.0e-18 94.0 125 44.8
FAN15G3424 Fragaria x ananassa HOM05D004952 ORTHO05D006131 6.0e-18 94.0 125 44.8
FAN20G1371 Fragaria x ananassa HOM05D004952 ORTHO05D006131 6.0e-18 94.0 125 44.8
MD15G1036000 Malus domestica HOM05D004952 ORTHO05D006131 7.9e-18 93.6 125 44.8
Prupe.1G389900 Prunus persica HOM05D004952 ORTHO05D006131 7.9e-18 93.6 125 44.8
FAN27G3039 Fragaria x ananassa HOM05D004952 ORTHO05D006131 1.0e-17 93.2 125 44.8
HanXRQChr02g0059171 Helianthus annuus HOM05D004952 ORTHO05D006131 1.0e-17 93.2 125 44.0
PSO339G5893 Papaver somniferum HOM05D004952 ORTHO05D006131 1.0e-17 93.2 125 44.8
THA.LOC104813523 Tarenaya hassleriana HOM05D004952 ORTHO05D006131 1.0e-17 93.2 125 43.2
Zm00001eb327280 Zea mays HOM05D004952 ORTHO05D006131 1.3e-17 92.8 126 41.3
RcHm_v2.0_Chr6g0299841 Rosa chinensis HOM05D004952 ORTHO05D006131 1.8e-17 92.4 125 44.0
Lalb_Chr08g0245691 Lupinus albus HOM05D004952 ORTHO05D006131 3.3e-16 88.2 125 44.0
SEGI_10220 Sequoiadendron giganteum HOM05D004952 ORTHO05D006131 9.7e-16 86.7 126 40.5
SEGI_10713 Sequoiadendron giganteum HOM05D004952 ORTHO05D006131 9.7e-16 86.7 126 40.5
Haze_25582 Corylus avellana HOM05D004952 ORTHO05D006131 1.3e-15 86.3 61 70.5
Actinidia22602 Actinidia chinensis HOM05D004952 ORTHO05D006131 3.7e-15 84.7 61 67.2
AUR62038364 Chenopodium quinoa HOM05D004952 ORTHO05D006131 4.1e-14 81.3 60 68.3
AUR62040965 Chenopodium quinoa HOM05D004952 ORTHO05D006131 4.1e-14 81.3 60 68.3
unitig_0.g724 Utricularia gibba HOM05D004952 ORTHO05D006131 6.9e-14 80.5 125 40.0
AagrBONN_evm.TU.Sc2ySwM_344.3827 Anthoceros agrestis HOM05D004952 ORTHO05D006131 2.6e-13 78.6 126 36.5
EL10Ac2g03413 Beta vulgaris HOM05D004952 ORTHO05D006131 3.4e-13 78.2 60 65.0
SHI13748 Sapria himalayana HOM05D004952 ORTHO05D006131 7.7e-13 77.0 125 38.4
Oeu007037.1 Olea europaea HOM05D004952 ORTHO05D006131 2.2e-12 75.5 118 40.7
TAR625G1292 Trochodendron aralioides HOM05D004952 ORTHO05D006131 2.9e-12 75.1 110 43.6
BcaC08g45301 Brassica carinata HOM05D004952 ORTHO05D006131 1.4e-11 72.8 100 41.0
BolC6t38070H Brassica oleracea HOM05D004952 ORTHO05D006131 1.4e-11 72.8 100 41.0
Mapoly0015s0183 Marchantia polymorpha HOM05D004952 ORTHO05D006131 1.4e-11 72.8 126 33.3
Pp3c13_8820 Physcomitrium patens HOM05D004952 ORTHO05D006131 3.2e-11 71.6 126 34.9
BcaB05g23764 Brassica carinata HOM05D004952 ORTHO05D006131 3.0e-09 65.1 53 64.2
Glyma.04G036460 Glycine max HOM05D004952 ORTHO05D006131 2.8e-07 58.5 57 57.9
Prupe.1G390100 Prunus persica HOM05D004952 ORTHO05D006131 1.8e-06 55.8 48 56.2
C06p29070 Brassica napus HOM05D002649 ORTHO05D002838 6.9e-06 53.9 51 47.1


User provided reference genes

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