Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0019 Ceratophyllum demersum HOM05D007950 ORTHO05D009951 1.1e-28 129.4 69 100.0
Nn8g39199 Nelumbo nucifera HOM05D007950 ORTHO05D009951 8.7e-15 83.2 67 67.2
FAN26G3407 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.9e-14 82.0 67 62.7
TAR636G2963 Trochodendron aralioides HOM05D007950 ORTHO05D009951 5.6e-14 80.5 67 59.7
FvH4_1g04841 Fragaria vesca HOM05D007950 ORTHO05D009951 1.6e-13 79.0 67 61.2
FAN19G2230 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.6e-13 79.0 67 61.2
Thecc.06G089600 Theobroma cacao HOM05D007950 ORTHO05D009951 2.1e-13 78.6 69 59.4
CiPaw.02G150700 Carya illinoinensis HOM05D007950 ORTHO05D009951 2.8e-13 78.2 69 60.9
Sc10g0007380 Simmondsia chinensis HOM05D007950 ORTHO05D009951 2.8e-13 78.2 69 53.6
Gohir.D03G063400 Gossypium hirsutum HOM05D007950 ORTHO05D009951 8.1e-13 76.6 67 58.2
Gorai.002G059800 Gossypium raimondii HOM05D007950 ORTHO05D009951 8.1e-13 76.6 67 58.2
QL05p023317 Quercus lobata HOM05D007950 ORTHO05D009951 8.1e-13 76.6 67 56.7
FAN23G0617 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.8e-12 75.5 67 59.7
Gohir.1Z049586 Gossypium hirsutum HOM05D007950 ORTHO05D009951 3.1e-12 74.7 67 56.7
Nn2g11757 Nelumbo nucifera HOM05D007950 ORTHO05D009951 9.0e-12 73.2 67 56.7
RcHm_v2.0_Chr2g0090511 Rosa chinensis HOM05D007950 ORTHO05D009951 9.0e-12 73.2 67 53.7
CiPaw.04G164400 Carya illinoinensis HOM05D007950 ORTHO05D009951 1.2e-11 72.8 58 62.1
Eucgr.J02984 Eucalyptus grandis HOM05D007950 ORTHO05D009951 1.5e-11 72.4 60 60.0
GSVIVG01015395001 Vitis vinifera HOM05D007950 ORTHO05D009951 1.5e-11 72.4 67 55.2
Gohir.A05G130600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.0e-11 72.0 69 55.1
Potri.001G181701 Populus trichocarpa HOM05D007950 ORTHO05D009951 2.0e-11 72.0 69 53.6
QL02p085472 Quercus lobata HOM05D007950 ORTHO05D009951 2.0e-11 72.0 67 53.7
Eucgr.C01044 Eucalyptus grandis HOM05D007950 ORTHO05D009951 4.5e-11 70.9 67 56.7
MD02G1047700 Malus domestica HOM05D007950 ORTHO05D009951 4.5e-11 70.9 67 55.2
MD15G1186200 Malus domestica HOM05D007950 ORTHO05D009951 4.5e-11 70.9 67 53.7
Gohir.D05G129500 Gossypium hirsutum HOM05D007950 ORTHO05D009951 5.8e-11 70.5 69 53.6
Lj3g0016273 Lotus japonicus HOM05D007950 ORTHO05D009951 5.8e-11 70.5 68 51.5
Haze_16407 Corylus avellana HOM05D007950 ORTHO05D009951 7.6e-11 70.1 67 53.7
Haze_16408 Corylus avellana HOM05D007950 ORTHO05D009951 7.6e-11 70.1 67 53.7
Prupe.7G230500 Prunus persica HOM05D007950 ORTHO05D009951 7.6e-11 70.1 58 60.3
Actinidia20354 Actinidia chinensis HOM05D007950 ORTHO05D009951 9.9e-11 69.7 67 53.7
Gohir.D06G060600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 9.9e-11 69.7 67 56.7
Gohir.A06G062300 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.3e-10 69.3 67 55.2
Thecc.09G111000 Theobroma cacao HOM05D007950 ORTHO05D009951 1.3e-10 69.3 67 52.2
vmacro20696 Vaccinium macrocarpon HOM05D007950 ORTHO05D009951 1.7e-10 68.9 67 53.7
Lalb_Chr04g0262731 Lupinus albus HOM05D007950 ORTHO05D009951 2.2e-10 68.6 68 50.0
Manes.16G116501 Manihot esculenta HOM05D007950 ORTHO05D009951 2.9e-10 68.2 67 49.3
Gorai.010G070600 Gossypium raimondii HOM05D007950 ORTHO05D009951 3.8e-10 67.8 67 55.2
CSS0032282 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 4.9e-10 67.4 61 55.7
CiPaw.03G232500 Carya illinoinensis HOM05D007950 ORTHO05D009951 4.9e-10 67.4 68 51.5
Ciclev10010772m.g Citrus clementina HOM05D007950 ORTHO05D009951 4.9e-10 67.4 67 53.7
Medtr4g012610 Medicago truncatula HOM05D007950 ORTHO05D009951 4.9e-10 67.4 68 50.0
Psat7g251240 Pisum sativum HOM05D007950 ORTHO05D009951 4.9e-10 67.4 68 51.5
PGR102G0372 Punica granatum HOM05D007950 ORTHO05D009951 4.9e-10 67.4 67 52.2
CSS0048253 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 1.1e-09 66.2 68 54.4
Glyma.08G206200 Glycine max HOM05D007950 ORTHO05D009951 1.1e-09 66.2 68 50.0
TPR.G24171 Trifolium pratense HOM05D007950 ORTHO05D009951 1.4e-09 65.9 65 50.8
CSS0015996 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 1.9e-09 65.5 65 49.2
Phvul.003G020900 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 4.2e-09 64.3 67 49.3
SalBow2G2396 Salvia bowleyana HOM05D007950 ORTHO05D009951 4.2e-09 64.3 49 61.2
ATR0980G014 Amborella trichopoda HOM05D007950 ORTHO05D009951 5.4e-09 63.9 67 52.2
Phvul.010G150100 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 5.4e-09 63.9 68 48.5
TPR.G35274 Trifolium pratense HOM05D007950 ORTHO05D009951 5.4e-09 63.9 66 45.5
Medtr4g012580 Medicago truncatula HOM05D007950 ORTHO05D009951 7.1e-09 63.5 68 47.1
Glyma.07G005901 Glycine max HOM05D000325 ORTHO05D002025 9.3e-09 63.2 65 50.8
ClCG06G008510 Citrullus lanatus HOM05D007950 ORTHO05D009951 2.1e-08 62.0 67 46.3
CsaV3_1G030490 Cucumis sativus L. HOM05D007950 ORTHO05D009951 2.1e-08 62.0 65 46.2
FAN14G2438 Fragaria x ananassa HOM05D007950 ORTHO05D009951 2.1e-08 62.0 69 50.7
Cc06_g09630 Coffea canephora HOM05D007950 ORTHO05D009951 4.6e-08 60.8 62 50.0
Manes.11G045700 Manihot esculenta HOM05D007950 ORTHO05D009951 7.9e-08 60.1 65 46.2
FAN05G0591 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.0e-07 59.7 69 49.3
Manes.03G020101 Manihot esculenta HOM05D007950 ORTHO05D009951 1.0e-07 59.7 67 46.3
Potri.003G054001 Populus trichocarpa HOM05D007950 ORTHO05D009951 1.0e-07 59.7 69 50.7
arahy.Tifrunner.gnm1.ann1.7G47EE Arachis hypogaea HOM05D007950 ORTHO05D009951 1.3e-07 59.3 67 41.8
arahy.Tifrunner.gnm1.ann1.U6R6BR Arachis hypogaea HOM05D007950 ORTHO05D009951 1.3e-07 59.3 67 41.8
arahy.Tifrunner.gnm1.ann1.6Z76EK Arachis hypogaea HOM05D007950 ORTHO05D009951 3.9e-07 57.8 70 45.7
Psat1g042280 Pisum sativum HOM05D007950 ORTHO05D009951 5.1e-07 57.4 67 43.3
Cc04_g03310 Coffea canephora HOM05D007950 ORTHO05D009951 8.7e-07 56.6 65 46.2
Medtr6g086645 Medicago truncatula HOM05D007950 ORTHO05D009951 8.7e-07 56.6 67 43.3
Prupe.3G070100 Prunus persica HOM05D007950 ORTHO05D009951 1.1e-06 56.2 71 47.9
TPR.G8534 Trifolium pratense HOM05D007950 ORTHO05D009951 1.5e-06 55.8 65 43.1
Os06g0686900 Oryza sativa ssp. japonica HOM05D018973 ORTHO05D009951 3.3e-06 54.7 68 44.1


User provided reference genes

Program Settings