Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3624 Ceratophyllum demersum HOM05D007956 ORTHO05D010152 2.5e-133 478.8 243 100.0
TAR629G0629 Trochodendron aralioides HOM05D007956 ORTHO05D010152 3.7e-52 209.1 267 43.8
QL05p074803 Quercus lobata HOM05D007956 ORTHO05D010152 3.8e-41 172.6 274 35.8
MBI18_g39550_MAGBIO Magnolia biondii HOM05D007956 ORTHO05D010152 2.1e-39 166.8 272 37.9
CiPaw.09G087900 Carya illinoinensis HOM05D007956 ORTHO05D010152 6.8e-38 161.8 274 33.6
Haze_06747 Corylus avellana HOM05D007956 ORTHO05D010152 1.7e-36 157.1 264 35.6
TWI38G0189 Tripterygium wilfordii HOM05D007956 ORTHO05D010152 8.3e-36 154.8 276 34.8
Prupe.4G025500 Prunus persica HOM05D007956 ORTHO05D010152 1.1e-35 154.5 267 33.7
RcHm_v2.0_Chr5g0003911 Rosa chinensis HOM05D007956 ORTHO05D010152 1.4e-35 154.1 267 34.1
Actinidia05532 Actinidia chinensis HOM05D007956 ORTHO05D010152 1.8e-35 153.7 277 34.7
Rhsim13G0157400 Rhododendron simsii HOM05D003755 ORTHO05D004385 5.3e-35 152.1 277 33.9
Cfa000267 Carpinus fangiana HOM05D007956 ORTHO05D010152 1.2e-34 151.0 259 34.4
FAN25G3383 Fragaria x ananassa HOM05D007956 ORTHO05D010152 5.9e-34 148.7 266 33.8
MD00G1180200 Malus domestica HOM05D007956 ORTHO05D010152 2.2e-33 146.7 267 33.0
COL.COLO4_06641 Corchorus olitorius HOM05D007956 ORTHO05D010152 2.9e-33 146.4 274 32.1
vmacro03705 Vaccinium macrocarpon HOM05D007956 ORTHO05D010152 8.5e-33 144.8 274 33.9
Manes.16G011600 Manihot esculenta HOM05D007956 ORTHO05D010152 1.1e-32 144.4 277 31.8
Sc17g0007100 Simmondsia chinensis HOM05D007956 ORTHO05D010152 7.2e-32 141.7 266 32.0
EL10Ac8g19997 Beta vulgaris HOM05D007956 ORTHO05D010152 1.6e-31 140.6 275 29.8
FAN21G4014 Fragaria x ananassa HOM05D007956 ORTHO05D010152 2.1e-31 140.2 260 33.1
Sabra04G0011500 Salix brachista HOM05D007956 ORTHO05D010152 2.1e-31 140.2 277 32.1
Duzib235G1205 Durio zibethinus HOM05D007956 ORTHO05D010152 4.0e-30 136.0 274 31.0
AUR62012653 Chenopodium quinoa HOM05D007956 ORTHO05D010152 5.2e-30 135.6 259 30.5
Potri.004G020900 Populus trichocarpa HOM05D007956 ORTHO05D010152 6.8e-30 135.2 277 31.0
Ciclev10018367m.g Citrus clementina HOM05D007956 ORTHO05D010152 8.8e-30 134.8 268 32.8
Gorai.009G176500 Gossypium raimondii HOM05D007956 ORTHO05D010152 8.8e-30 134.8 276 31.5
Thecc.06G215000 Theobroma cacao HOM05D007956 ORTHO05D010152 8.8e-30 134.8 274 31.8
CANSAT56G1376 Cannabis sativa HOM05D007956 ORTHO05D010152 4.4e-29 132.5 267 31.1
Nitab4.5_0005793g0030 Nicotiana tabacum HOM05D007956 ORTHO05D010152 5.7e-29 132.1 269 32.0
FvH4_3g02620 Fragaria vesca HOM05D007956 ORTHO05D010152 1.3e-28 131.0 226 34.5
PGSC0003DMG400002071 Solanum tuberosum HOM05D007956 ORTHO05D010152 9.1e-27 124.8 244 32.8
CAN.G569.38 Capsicum annuum HOM05D007956 ORTHO05D010152 1.2e-26 124.4 259 32.4
Solyc02g080170.1 Solanum lycopersicum HOM05D007956 ORTHO05D010152 3.5e-26 122.9 244 32.4
Ah.09g235260 Amaranthus hybridus HOM05D007956 ORTHO05D010152 4.5e-26 122.5 240 30.0
Aqoxy1G03672 Aquilegia oxysepala HOM05D007956 ORTHO05D010152 4.5e-26 122.5 216 36.6
PGR042G2623 Punica granatum HOM05D007956 ORTHO05D010152 5.9e-26 122.1 265 32.5
Sopen02g024890 Solanum pennellii HOM05D007956 ORTHO05D010152 1.3e-25 120.9 241 32.8
Peaxi162Scf00427g00116 Petunia axillaris HOM05D007956 ORTHO05D010152 5.0e-25 119.0 258 31.4
CSS0009024 Camellia sinensis var. sinensis HOM05D007956 ORTHO05D009038 6.6e-25 118.6 150 43.3
Aa31LG6G3180 Aethionema arabicum HOM05D007956 ORTHO05D010152 3.3e-24 116.3 272 30.5
HanXRQChr16g0515891 Helianthus annuus HOM05D007956 ORTHO05D010152 4.2e-24 115.9 277 30.7
Eucgr.E04115 Eucalyptus grandis HOM05D007956 ORTHO05D010152 9.5e-24 114.8 260 31.2
AUR62022001 Chenopodium quinoa HOM05D007956 ORTHO05D010152 2.1e-23 113.6 223 30.0
Eucgr.E04114 Eucalyptus grandis HOM05D007956 ORTHO05D010152 2.1e-23 113.6 262 30.9
Nitab4.5_0002347g0140 Nicotiana tabacum HOM05D007956 ORTHO05D010152 2.1e-23 113.6 266 29.7
Carub.0007s2026 Capsella rubella HOM05D007956 ORTHO05D010152 2.8e-23 113.2 268 28.7
Lj1P1226T19 Lonicera japonica HOM05D007956 ORTHO05D010152 6.1e-23 112.1 147 40.1
SGA_v2.0_scaffold114G32030 Striga asiatica HOM05D007956 ORTHO05D010152 1.0e-22 111.3 271 28.0
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 1.8e-22 110.5 150 41.3
Migut.M01290 Erythranthe guttata HOM05D007956 ORTHO05D010152 1.8e-22 110.5 270 28.5
AL7G32950 Arabidopsis lyrata HOM05D007956 ORTHO05D010152 3.0e-22 109.8 270 27.8
Nn1g07048 Nelumbo nucifera HOM05D007956 ORTHO05D010152 5.2e-22 109.0 173 38.2
CARHR227750 Cardamine hirsuta HOM05D007956 ORTHO05D010152 8.9e-22 108.2 269 29.4
Thhalv10024760m.g Eutrema salsugineum HOM05D007956 ORTHO05D010152 1.5e-21 107.5 265 28.7
AT4G21170 Arabidopsis thaliana HOM05D007956 ORTHO05D010152 3.4e-21 106.3 270 28.1
Cc02_g11640 Coffea canephora HOM05D007956 ORTHO05D010152 7.5e-21 105.1 269 28.6
THA.LOC104812478 Tarenaya hassleriana HOM05D007956 ORTHO05D010152 1.7e-20 104.0 267 27.7
Sp7g19250 Schrenkiella parvula HOM05D007956 ORTHO05D010152 8.3e-20 101.7 268 28.4
Oeu002723.1 Olea europaea HOM05D007956 ORTHO05D010152 2.4e-19 100.1 267 30.0
BcaNung03837 Brassica carinata HOM05D007956 ORTHO05D010152 3.2e-19 99.8 266 28.6
DCAR_008134 Daucus carota HOM05D007956 ORTHO05D010152 7.0e-19 98.6 140 38.6
Gohir.D05G171300 Gossypium hirsutum HOM05D007956 ORTHO05D010152 1.6e-18 97.4 150 36.0
Gohir.A05G168200 Gossypium hirsutum HOM05D007956 ORTHO05D010152 7.8e-18 95.1 143 37.8
Lsat_1_v5_gn_4_59081 Lactuca sativa HOM05D007956 ORTHO05D010152 7.8e-18 95.1 276 27.2
SalBow8G0305 Salvia bowleyana HOM05D007956 ORTHO05D010152 1.3e-17 94.4 269 27.1
BcaC09g51250 Brassica carinata HOM05D007956 ORTHO05D010152 2.3e-17 93.6 266 26.3
C01p15110 Brassica napus HOM05D007956 ORTHO05D010152 2.3e-17 93.6 266 26.3
BolC1t01460H Brassica oleracea HOM05D007956 ORTHO05D010152 2.3e-17 93.6 266 26.3
BraA01t01197Z Brassica rapa HOM05D007956 ORTHO05D010152 2.3e-17 93.6 267 27.3
MSTRG.15969 Avicennia marina HOM05D007956 ORTHO05D010152 5.0e-17 92.4 271 26.2
A01p12520 Brassica napus HOM05D007956 ORTHO05D010152 5.0e-17 92.4 266 25.2
HPP92_010087 Vanilla planifolia HOM05D007956 ORTHO05D010152 1.1e-16 91.3 255 29.0
Atru.chr10.2152 Acer truncatum HOM05D007956 ORTHO05D010152 1.2e-15 87.8 122 44.3
PGSC0003DMG400014245 Solanum tuberosum HOM05D005764 ORTHO05D006600 1.2e-10 71.2 148 32.4
Lj1C797T15 Lonicera japonica HOM05D005764 ORTHO05D006600 2.0e-10 70.5 165 29.1
Lj1C797T16 Lonicera japonica HOM05D005764 ORTHO05D006600 2.0e-10 70.5 165 29.1
Cc00_g12250 Coffea canephora HOM05D005764 ORTHO05D006600 2.3e-09 67.0 147 31.3
CAN.G843.18 Capsicum annuum HOM05D005764 ORTHO05D006600 3.9e-09 66.2 153 31.4
ATR1127G166 Amborella trichopoda HOM05D007358 ORTHO05D009117 2.5e-08 63.5 180 28.3
Eucgr.G00774 Eucalyptus grandis HOM05D007426 ORTHO05D009167 2.5e-08 63.5 150 29.3
ClCG02G014020 Citrullus lanatus HOM05D005764 ORTHO05D006600 3.3e-08 63.2 172 26.7
Nn7g38163 Nelumbo nucifera HOM05D005764 ORTHO05D006600 4.3e-08 62.8 171 25.7
CsaV3_5G006140 Cucumis sativus L. HOM05D005764 ORTHO05D006600 9.5e-08 61.6 167 27.5
COL.COLO4_05687 Corchorus olitorius HOM05D000424 ORTHO05D000355 2.1e-07 60.5 98 33.7
CDE07G1153 Ceratophyllum demersum HOM05D007426 ORTHO05D009167 3.6e-07 59.7 130 27.7
RcHm_v2.0_Chr7g0188811 Rosa chinensis HOM05D005764 ORTHO05D006600 3.6e-07 59.7 179 25.1
ATR0580G451 Amborella trichopoda HOM05D007212 ORTHO05D009094 4.7e-07 59.3 188 25.5
Aa31LG3G11740 Aethionema arabicum HOM05D007390 ORTHO05D009114 6.2e-07 58.9 169 23.7
Hma1.2p1_1765F.1_g301480 Hydrangea macrophylla HOM05D000424 ORTHO05D000355 6.2e-07 58.9 132 25.0
BcaB08g35947 Brassica carinata HOM05D007390 ORTHO05D009114 8.0e-07 58.5 239 22.6
Eucgr.L03252 Eucalyptus grandis HOM05D007956 ORTHO05D010152 8.0e-07 58.5 104 32.7
Lalb_Chr01g0006871 Lupinus albus HOM05D002453 ORTHO05D008746 8.0e-07 58.5 136 25.7
MBI02_g38361_MAGBIO Magnolia biondii HOM05D007426 ORTHO05D009167 8.0e-07 58.5 150 28.0
AL8G31410 Arabidopsis lyrata HOM05D007390 ORTHO05D009114 1.1e-06 58.2 171 25.1
BcaB08g35944 Brassica carinata HOM05D007390 ORTHO05D009114 1.1e-06 58.2 170 24.7
BcaC04g20197 Brassica carinata HOM05D007390 ORTHO05D009114 1.1e-06 58.2 170 24.7
C09p46770 Brassica napus HOM05D007390 ORTHO05D009114 1.1e-06 58.2 170 24.7
BraA10t43400Z Brassica rapa HOM05D007390 ORTHO05D009114 1.1e-06 58.2 162 25.3
Nitab4.5_0000556g0140 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.1e-06 58.2 153 26.1
Nitab4.5_0000663g0160 Nicotiana tabacum HOM05D005764 ORTHO05D006600 1.1e-06 58.2 152 29.6
PSO017G0179 Papaver somniferum HOM05D005764 ORTHO05D006600 1.1e-06 58.2 182 23.6
Aa31LG11G11130 Aethionema arabicum HOM05D007660 ORTHO05D009442 1.4e-06 57.8 140 30.7
BolC9t57528H Brassica oleracea HOM05D007390 ORTHO05D009114 1.4e-06 57.8 170 24.7
Cfa014216 Carpinus fangiana HOM05D005764 ORTHO05D006600 1.4e-06 57.8 155 28.4
ECA234G3464 Erigeron canadensis HOM05D007639 ORTHO05D009509 1.4e-06 57.8 122 28.7
A10p13050 Brassica napus HOM05D007390 ORTHO05D009114 1.8e-06 57.4 162 24.7
Glyma.14G156100 Glycine max HOM05D007426 ORTHO05D009167 1.8e-06 57.4 145 29.0
Sp6g17720 Schrenkiella parvula HOM05D007390 ORTHO05D009114 1.8e-06 57.4 171 22.8
Sed0013038 Sechium edule HOM05D005764 ORTHO05D006600 1.8e-06 57.4 172 25.0
A03p00400 Brassica napus HOM05D007455 ORTHO05D009431 2.3e-06 57.0 181 24.9
Dinv21306 Davidia involucrata HOM05D005764 ORTHO05D006600 2.3e-06 57.0 150 27.3
QL04p061529 Quercus lobata HOM05D005764 ORTHO05D006600 2.3e-06 57.0 150 28.0
Rhsim07G0187500 Rhododendron simsii HOM05D001660 ORTHO05D003277 2.3e-06 57.0 168 26.8
GSVIVG01030107001 Vitis vinifera HOM05D005764 ORTHO05D006600 2.3e-06 57.0 191 24.6
Manes.06G126050 Manihot esculenta HOM05D005764 ORTHO05D006600 3.1e-06 56.6 172 25.6
Aa31LG5G8990 Aethionema arabicum HOM05D004824 ORTHO05D003903 4.0e-06 56.2 221 20.4
Glyma.19G010600 Glycine max HOM05D003039 ORTHO05D008410 4.0e-06 56.2 110 30.9
SHI25578 Sapria himalayana HOM05D007639 ORTHO05D009509 4.0e-06 56.2 189 22.8
Ciclev10004237m.g Citrus clementina HOM05D003975 ORTHO05D009762 5.2e-06 55.8 167 26.9
Haze_12606 Corylus avellana HOM05D005764 ORTHO05D006600 5.2e-06 55.8 151 28.5
Haze_12617 Corylus avellana HOM05D005764 ORTHO05D006600 5.2e-06 55.8 155 28.4
Hma1.2p1_0286F.1_g114160 Hydrangea macrophylla HOM05D005287 ORTHO05D006893 5.2e-06 55.8 188 22.9
A06p08270 Brassica napus HOM05D002890 ORTHO05D009847 6.8e-06 55.5 170 21.8
SEGI_33147 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 6.8e-06 55.5 142 28.2
CDE07G0739 Ceratophyllum demersum HOM05D003039 ORTHO05D008410 8.9e-06 55.1 216 24.5
Nitab4.5_0002344g0040 Nicotiana tabacum HOM05D007570 ORTHO05D009365 8.9e-06 55.1 132 27.3
PGR119G0474 Punica granatum HOM05D007426 ORTHO05D009167 8.9e-06 55.1 144 28.5
Solyc01g099530.3 Solanum lycopersicum HOM05D001281 ORTHO05D001139 8.9e-06 55.1 132 28.0


User provided reference genes

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