Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 1.1e-96 356.7 185 100.0
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 1.3e-36 157.1 193 50.3
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 8.5e-33 144.4 191 46.6
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 1.4e-30 137.1 153 48.4
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 5.2e-30 135.2 150 47.3
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 6.7e-30 134.8 196 41.8
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 3.3e-29 132.5 195 41.0
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 5.7e-29 131.7 198 40.9
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 7.4e-29 131.3 196 42.9
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 9.7e-29 131.0 199 40.2
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 9.7e-29 131.0 154 43.5
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 1.3e-28 130.6 203 40.9
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 1.7e-28 130.2 192 40.6
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 1.7e-28 130.2 196 41.8
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 2.2e-28 129.8 196 42.9
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 3.7e-28 129.0 148 43.9
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 3.7e-28 129.0 150 45.3
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 4.8e-28 128.6 161 42.2
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 6.3e-28 128.3 193 40.9
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 6.3e-28 128.3 197 40.6
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 6.3e-28 128.3 180 41.1
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 8.2e-28 127.9 196 40.3
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 8.2e-28 127.9 149 47.0
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 1.1e-27 127.5 198 41.4
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 1.1e-27 127.5 196 39.8
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 1.4e-27 127.1 193 39.9
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 1.4e-27 127.1 200 41.0
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 1.4e-27 127.1 143 45.5
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 1.4e-27 127.1 205 41.5
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 1.8e-27 126.7 139 49.6
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 3.1e-27 125.9 199 40.2
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 3.1e-27 125.9 196 43.4
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 4.1e-27 125.6 207 39.1
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 5.3e-27 125.2 201 39.8
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 7.0e-27 124.8 203 37.9
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 9.1e-27 124.4 191 41.4
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 1.6e-26 123.6 201 39.3
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 2.0e-26 123.2 204 37.7
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 2.0e-26 123.2 198 39.9
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 2.6e-26 122.9 204 38.2
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 3.5e-26 122.5 145 44.1
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 5.9e-26 121.7 198 39.4
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 5.9e-26 121.7 148 45.3
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 1.3e-25 120.6 205 37.6
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 1.7e-25 120.2 207 36.7
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 2.2e-25 119.8 199 40.2
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 2.9e-25 119.4 196 40.3
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 3.8e-25 119.0 207 39.1
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 3.8e-25 119.0 206 40.3
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 3.8e-25 119.0 196 39.3
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 5.0e-25 118.6 202 39.6
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 5.0e-25 118.6 198 37.9
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 6.5e-25 118.2 210 36.2
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 8.5e-25 117.9 209 35.9
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 1.1e-24 117.5 160 41.9
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 2.5e-24 116.3 162 42.0
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 4.2e-24 115.5 196 37.8
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 4.2e-24 115.5 197 37.1
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 9.4e-24 114.4 224 35.7
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 3.6e-23 112.5 202 38.6
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 4.7e-23 112.1 170 38.8
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 6.1e-23 111.7 194 37.1
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 6.1e-23 111.7 204 36.3
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 8.0e-23 111.3 205 38.0
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 8.0e-23 111.3 160 41.2
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 1.8e-22 110.2 206 35.9
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 1.8e-22 110.2 199 37.2
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 2.3e-22 109.8 185 40.5
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 3.0e-22 109.4 209 35.4
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 5.2e-22 108.6 205 37.1
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 5.2e-22 108.6 205 37.1
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 1.2e-21 107.5 212 33.5
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 1.2e-21 107.5 189 36.5
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 1.5e-21 107.1 146 39.7
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 2.0e-21 106.7 195 36.9
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 2.6e-21 106.3 206 35.0
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 3.3e-21 105.9 156 43.6
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 4.4e-21 105.5 189 36.5
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 4.4e-21 105.5 166 38.6
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 5.7e-21 105.1 212 35.4
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 7.5e-21 104.8 217 35.9
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 7.5e-21 104.8 167 38.3
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 2.8e-20 102.8 204 34.8
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 3.7e-20 102.4 207 33.8
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 3.7e-20 102.4 154 42.2
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 8.2e-20 101.3 114 43.9
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 2.4e-19 99.8 208 31.7
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 4.1e-19 99.0 163 36.2
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 4.1e-19 99.0 148 41.9
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 7.0e-19 98.2 210 32.9
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 2.0e-18 96.7 158 36.1
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 3.5e-18 95.9 210 31.9
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 3.5e-18 95.9 210 31.9
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 3.8e-17 92.4 151 37.7
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 3.2e-16 89.4 250 31.2
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 6.8e-14 81.6 89 47.2
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 1.7e-12 77.0 107 40.2
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 8.3e-12 74.7 75 49.3
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 2.4e-11 73.2 133 37.6
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 4.1e-11 72.4 121 39.7
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 2.0e-10 70.1 66 48.5
CBR_g26029 Chara braunii HOM05D030917 ORTHO05D009223 1.3e-09 67.4 110 33.6
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 1.1e-08 64.3 64 48.4
Pp3c14_1800 Physcomitrium patens HOM05D030917 ORTHO05D009223 1.6e-07 60.5 206 24.3


User provided reference genes

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