Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3540 Ceratophyllum demersum HOM05D005744 ORTHO05D130478 2.4e-90 335.5 171 100.0
CDE12G0192 Ceratophyllum demersum HOM05D005744 ORTHO05D007503 2.5e-47 192.6 103 94.2
CDE05G2332 Ceratophyllum demersum HOM05D005744 ORTHO05D007503 7.6e-36 154.5 104 80.8
Lalb_Chr08g0237111 Lupinus albus HOM05D005744 ORTHO05D007503 1.3e-16 90.5 105 47.6
Nn3g16475 Nelumbo nucifera HOM05D005744 ORTHO05D007503 1.8e-16 90.1 103 47.6
arahy.Tifrunner.gnm1.ann1.SJIN4P Arachis hypogaea HOM05D005744 ORTHO05D007503 8.7e-16 87.8 117 44.4
arahy.Tifrunner.gnm1.ann1.DQ5P63 Arachis hypogaea HOM05D005744 ORTHO05D007503 1.5e-15 87.0 114 45.6
Medtr3g074980 Medicago truncatula HOM05D005744 ORTHO05D007503 5.7e-15 85.1 113 44.2
Aqoxy3G01542 Aquilegia oxysepala HOM05D005744 ORTHO05D007503 2.1e-14 83.2 103 47.6
Psat5g140680 Pisum sativum HOM05D005744 ORTHO05D007503 2.1e-14 83.2 113 43.4
Glyma.06G170500 Glycine max HOM05D005744 ORTHO05D007503 2.8e-14 82.8 115 40.9
TPR.G26152 Trifolium pratense HOM05D005744 ORTHO05D007503 6.2e-14 81.6 113 43.4
TAR629G2476 Trochodendron aralioides HOM05D005744 ORTHO05D007503 8.2e-14 81.3 109 45.0
GSVIVG01008538001 Vitis vinifera HOM05D005744 ORTHO05D007503 1.1e-13 80.9 107 44.9
Lj9A478G92 Lonicera japonica HOM05D005744 ORTHO05D007503 1.4e-13 80.5 112 41.1
Lj1g0015277 Lotus japonicus HOM05D005744 ORTHO05D007503 1.4e-13 80.5 103 42.7
Ca_24503_v3 Cicer arietinum L. HOM05D005744 ORTHO05D007503 4.1e-13 79.0 113 41.6
PGR044G2189 Punica granatum HOM05D005744 ORTHO05D007503 4.1e-13 79.0 103 45.6
Sed0005313 Sechium edule HOM05D005744 ORTHO05D007503 4.1e-13 79.0 114 43.9
CARHR232280 Cardamine hirsuta HOM05D005744 ORTHO05D007503 9.0e-13 77.8 114 45.6
Thecc.03G128600 Theobroma cacao HOM05D005744 ORTHO05D007503 9.0e-13 77.8 107 46.7
Dinv11169 Davidia involucrata HOM05D005744 ORTHO05D007503 2.0e-12 76.6 108 44.4
Atru.chr9.1122 Acer truncatum HOM05D005744 ORTHO05D007503 2.6e-12 76.3 108 45.4
Thhalv10025348m.g Eutrema salsugineum HOM05D005744 ORTHO05D007503 2.6e-12 76.3 114 43.9
CANSAT80G0573 Cannabis sativa HOM05D005744 ORTHO05D007503 3.4e-12 75.9 108 45.4
PSO801G0019 Papaver somniferum HOM05D005744 ORTHO05D007503 3.4e-12 75.9 94 46.8
AL7G28320 Arabidopsis lyrata HOM05D005744 ORTHO05D007503 4.5e-12 75.5 113 44.2
Gohir.A12G189400 Gossypium hirsutum HOM05D005744 ORTHO05D007503 4.5e-12 75.5 111 47.7
Cpa.g.sc2981.2 Carica papaya HOM05D005744 ORTHO05D007503 5.8e-12 75.1 112 42.9
MELO3C026209.2 Cucumis melo HOM05D005744 ORTHO05D007503 7.6e-12 74.7 119 41.2
MSTRG.13706 Avicennia marina HOM05D005744 ORTHO05D007503 1.0e-11 74.3 115 44.3
Carub.0007s1619 Capsella rubella HOM05D005744 ORTHO05D007503 1.0e-11 74.3 120 45.0
CsaV3_1G000590 Cucumis sativus L. HOM05D005744 ORTHO05D007503 1.3e-11 73.9 119 42.0
TPR.G12158 Trifolium pratense HOM05D005744 ORTHO05D007503 1.3e-11 73.9 133 37.6
vmacro19203 Vaccinium macrocarpon HOM05D005744 ORTHO05D007503 1.3e-11 73.9 118 39.8
AT4G24880 Arabidopsis thaliana HOM05D005744 ORTHO05D007503 1.7e-11 73.6 117 46.2
Gohir.D12G191700 Gossypium hirsutum HOM05D005744 ORTHO05D007503 1.7e-11 73.6 107 45.8
Gorai.008G206000 Gossypium raimondii HOM05D005744 ORTHO05D007503 1.7e-11 73.6 107 45.8
Phvul.009G166600 Phaseolus vulgaris HOM05D005744 ORTHO05D007503 2.2e-11 73.2 128 37.5
ClCG06G017860 Citrullus lanatus HOM05D005744 ORTHO05D007503 2.9e-11 72.8 119 40.3
VMungo1309G1043 Vigna mungo HOM05D005744 ORTHO05D007503 2.9e-11 72.8 126 37.3
CSS0041302 Camellia sinensis var. sinensis HOM05D005744 ORTHO05D007503 3.8e-11 72.4 123 40.7
Sp7g22860 Schrenkiella parvula HOM05D005744 ORTHO05D007503 3.8e-11 72.4 118 40.7
PSO782G2798 Papaver somniferum HOM05D005744 ORTHO05D007503 5.0e-11 72.0 98 44.9
Aa31LG7G10970 Aethionema arabicum HOM05D005744 ORTHO05D007503 6.5e-11 71.6 118 43.2
Ciclev10020324m.g Citrus clementina HOM05D005744 ORTHO05D007503 6.5e-11 71.6 104 44.2
A03p55610 Brassica napus HOM05D005744 ORTHO05D007503 8.4e-11 71.2 118 40.7
C07p53850 Brassica napus HOM05D005744 ORTHO05D007503 8.4e-11 71.2 118 40.7
BraA03t14628Z Brassica rapa HOM05D005744 ORTHO05D007503 8.4e-11 71.2 118 42.4
BcaC06g32852 Brassica carinata HOM05D005744 ORTHO05D007503 1.1e-10 70.9 118 40.7
BolC7t45875H Brassica oleracea HOM05D005744 ORTHO05D007503 1.1e-10 70.9 118 40.7
HanXRQChr16g0498211 Helianthus annuus HOM05D005744 ORTHO05D007503 2.5e-10 69.7 108 41.7
SGA_v2.0_scaffold22G09828 Striga asiatica HOM05D005744 ORTHO05D007503 3.2e-10 69.3 123 37.4
FAN13G0489 Fragaria x ananassa HOM05D005744 ORTHO05D007503 4.2e-10 68.9 103 43.7
HPP92_020223 Vanilla planifolia HOM05D005744 ORTHO05D007503 4.2e-10 68.9 127 38.6
COL.COLO4_28103 Corchorus olitorius HOM05D005744 ORTHO05D007503 5.5e-10 68.6 109 41.3
DCAR_021616 Daucus carota HOM05D005744 ORTHO05D007503 5.5e-10 68.6 120 38.3
Duzib205G1133 Durio zibethinus HOM05D005744 ORTHO05D007503 5.5e-10 68.6 107 40.2
Migut.E00304 Erythranthe guttata HOM05D005744 ORTHO05D007503 9.3e-10 67.8 104 44.2
Nitab4.5_0000479g0030 Nicotiana tabacum HOM05D005744 ORTHO05D007503 9.3e-10 67.8 131 40.5
RhsimUnG0231400 Rhododendron simsii HOM05D005744 ORTHO05D007503 9.3e-10 67.8 103 38.8
Lsat_1_v5_gn_4_80081 Lactuca sativa HOM05D005744 ORTHO05D007503 3.5e-09 65.9 103 39.8
RcHm_v2.0_Chr7g0190291 Rosa chinensis HOM05D005744 ORTHO05D007503 4.6e-09 65.5 103 42.7
Cc08_g16880 Coffea canephora HOM05D005744 ORTHO05D007503 6.1e-09 65.1 120 39.2
Manes.14G051500 Manihot esculenta HOM05D005744 ORTHO05D007503 6.1e-09 65.1 111 38.7
unitig_27.g25288 Utricularia gibba HOM05D005744 ORTHO05D007503 6.1e-09 65.1 103 33.0
FAN18G3767 Fragaria x ananassa HOM05D005744 ORTHO05D007503 7.9e-09 64.7 103 42.7
Oeu010732.1 Olea europaea HOM05D005744 ORTHO05D007503 7.9e-09 64.7 123 38.2
AUR62029618 Chenopodium quinoa HOM05D005744 ORTHO05D007503 1.0e-08 64.3 115 39.1
Peaxi162Scf00074g00136 Petunia axillaris HOM05D005744 ORTHO05D007503 1.3e-08 63.9 113 40.7
Rhsim08G0189700 Rhododendron simsii HOM05D005744 ORTHO05D007503 1.3e-08 63.9 103 38.8
CiPaw.11G008100 Carya illinoinensis HOM05D005744 ORTHO05D007503 1.8e-08 63.5 108 38.0
Actinidia25578 Actinidia chinensis HOM05D005744 ORTHO05D007503 2.3e-08 63.2 103 37.9
MD14G1157700 Malus domestica HOM05D005744 ORTHO05D007503 2.3e-08 63.2 103 37.9
PSO339G3552 Papaver somniferum HOM05D005744 ORTHO05D007503 3.0e-08 62.8 98 39.8
SalBow5G0293 Salvia bowleyana HOM05D005744 ORTHO05D007503 3.0e-08 62.8 107 36.4
SalBow5G5674 Salvia bowleyana HOM05D005744 ORTHO05D007503 3.0e-08 62.8 107 36.4
AUR62025939 Chenopodium quinoa HOM05D005744 ORTHO05D007503 3.9e-08 62.4 116 37.1
Nitab4.5_0002720g0090 Nicotiana tabacum HOM05D005744 ORTHO05D007503 3.9e-08 62.4 131 38.9
CAN.G567.98 Capsicum annuum HOM05D005744 ORTHO05D007503 5.1e-08 62.0 126 36.5
FvH4_5g08230 Fragaria vesca HOM05D005744 ORTHO05D007503 5.1e-08 62.0 103 41.7
EL10As4g23384 Beta vulgaris HOM05D005744 ORTHO05D007503 8.7e-08 61.2 113 38.1
Haze_07221 Corylus avellana HOM05D005744 ORTHO05D007503 1.1e-07 60.8 106 36.8
Sabra15G0116400 Salix brachista HOM05D005744 ORTHO05D007503 1.1e-07 60.8 110 36.4
FAN08G2910 Fragaria x ananassa HOM05D005744 ORTHO05D007503 1.5e-07 60.5 103 37.9
MBI07_g31012_MAGBIO Magnolia biondii HOM05D005744 ORTHO05D007503 1.5e-07 60.5 113 38.1
Potri.015G095400 Populus trichocarpa HOM05D005744 ORTHO05D007503 1.5e-07 60.5 100 40.0
PGSC0003DMG400012114 Solanum tuberosum HOM05D005744 ORTHO05D007503 1.5e-07 60.5 109 36.7
Ah.02g114920 Amaranthus hybridus HOM05D005744 ORTHO05D007503 2.5e-07 59.7 117 36.8
ATR0561G060 Amborella trichopoda HOM05D005744 ORTHO05D007503 3.3e-07 59.3 112 42.9
Cfa018827 Carpinus fangiana HOM05D005744 ORTHO05D007503 4.3e-07 58.9 110 36.4
PSO478G2520 Papaver somniferum HOM05D005744 ORTHO05D007503 5.7e-07 58.5 98 39.8
Eucgr.L02977 Eucalyptus grandis HOM05D005744 ORTHO05D007503 7.4e-07 58.2 130 33.1
Solyc08g083260.3 Solanum lycopersicum HOM05D005744 ORTHO05D007503 7.4e-07 58.2 113 34.5
Sopen08g031450 Solanum pennellii HOM05D005744 ORTHO05D007503 7.4e-07 58.2 113 34.5
THA.LOC104825016 Tarenaya hassleriana HOM05D005744 ORTHO05D007503 1.6e-06 57.0 103 38.8
COL.COLO4_31215 Corchorus olitorius HOM05D005744 ORTHO05D007503 3.7e-06 55.8 130 35.4
ECA232G3603 Erigeron canadensis HOM05D005744 ORTHO05D007503 3.7e-06 55.8 110 37.3
Prupe.5G151700 Prunus persica HOM05D005744 ORTHO05D007503 6.3e-06 55.1 107 35.5
Os01g0101300 Oryza sativa ssp. japonica HOM05D005744 ORTHO05D007503 8.2e-06 54.7 103 35.9


User provided reference genes

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