Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3513 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 2.5e-213 745.3 422 100.0
CDE02G0471 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 1.7e-177 626.3 433 79.9
Aqoxy7G02888 Aquilegia oxysepala HOM05D005890 ORTHO05D006717 1.1e-38 165.2 449 33.4
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 2.0e-37 161.0 455 34.9
QL07p048247 Quercus lobata HOM05D005890 ORTHO05D006717 5.8e-37 159.5 510 32.5
Nn8g40670 Nelumbo nucifera HOM05D005890 ORTHO05D006717 9.9e-37 158.7 591 30.6
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 8.4e-36 155.6 524 31.9
FAN12G2329 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.4e-35 154.8 371 37.7
VMungo1215G0729 Vigna mungo HOM05D005890 ORTHO05D006717 1.9e-35 154.5 418 34.4
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 1.2e-34 151.8 437 35.9
FAN07G1770 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.2e-34 151.8 380 36.8
Os12g0613500 Oryza sativa ssp. japonica HOM05D005890 ORTHO05D006717 1.6e-34 151.4 404 35.4
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 2.1e-34 151.0 434 33.4
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 2.7e-34 150.6 224 45.1
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 2.7e-34 150.6 222 42.8
Ciclev10008727m.g Citrus clementina HOM05D005890 ORTHO05D006717 3.5e-34 150.2 243 43.6
FAN17G2561 Fragaria x ananassa HOM05D005890 ORTHO05D006717 7.9e-34 149.1 371 36.9
Oeu063100.1 Olea europaea HOM05D005890 ORTHO05D006717 7.9e-34 149.1 158 55.1
SGA_v2.0_scaffold392G50652 Striga asiatica HOM05D005890 ORTHO05D006717 1.8e-33 147.9 241 44.0
Cfa013466 Carpinus fangiana HOM05D005890 ORTHO05D006717 2.3e-33 147.5 141 53.2
Lj4g0027857 Lotus japonicus HOM05D005890 ORTHO05D006717 5.1e-33 146.4 440 34.8
Nitab4.5_0000028g0410 Nicotiana tabacum HOM05D005890 ORTHO05D006717 8.7e-33 145.6 398 35.7
TAR637G0001 Trochodendron aralioides HOM05D005890 ORTHO05D006717 8.7e-33 145.6 86 81.4
Sed0014693 Sechium edule HOM05D005890 ORTHO05D006717 1.1e-32 145.2 446 33.4
MSTRG.26556 Avicennia marina HOM05D005890 ORTHO05D006717 1.5e-32 144.8 477 31.0
Glyma.17G058000 Glycine max HOM05D005890 ORTHO05D006717 2.5e-32 144.1 379 36.4
Potri.018G140200 Populus trichocarpa HOM05D005890 ORTHO05D006717 2.5e-32 144.1 285 40.0
Solyc07g008330.3 Solanum lycopersicum HOM05D005890 ORTHO05D006717 2.5e-32 144.1 170 53.5
GSVIVG01029286001 Vitis vinifera HOM05D005890 ORTHO05D006717 2.5e-32 144.1 473 34.0
Potri.006G073100 Populus trichocarpa HOM05D005890 ORTHO05D006717 4.3e-32 143.3 145 55.2
Sopen07g004220 Solanum pennellii HOM05D005890 ORTHO05D006717 4.3e-32 143.3 170 53.5
Zm00001eb136110 Zea mays HOM05D005890 ORTHO05D006717 4.3e-32 143.3 197 47.2
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 7.4e-32 142.5 200 50.0
ECA234G0353 Erigeron canadensis HOM05D005890 ORTHO05D006717 7.4e-32 142.5 100 72.0
unitig_8.g3553 Utricularia gibba HOM05D005890 ORTHO05D006717 7.4e-32 142.5 420 32.1
Atru.chr7.926 Acer truncatum HOM05D005890 ORTHO05D006717 9.6e-32 142.1 175 50.3
Nitab4.5_0004916g0020 Nicotiana tabacum HOM05D005890 ORTHO05D006717 9.6e-32 142.1 157 54.1
Sed0024384 Sechium edule HOM05D005890 ORTHO05D006717 1.3e-31 141.7 257 41.2
Sabra06G0054500 Salix brachista HOM05D005890 ORTHO05D006717 1.6e-31 141.4 227 44.5
A02p08710 Brassica napus HOM05D005890 ORTHO05D006717 2.1e-31 141.0 97 68.0
BraA02t05941Z Brassica rapa HOM05D005890 ORTHO05D006717 2.1e-31 141.0 97 68.0
DCAR_018014 Daucus carota HOM05D005890 ORTHO05D006717 3.7e-31 140.2 426 35.0
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 3.7e-31 140.2 421 34.0
BcaC03g14182 Brassica carinata HOM05D005890 ORTHO05D006717 4.8e-31 139.8 97 67.0
C02p14590 Brassica napus HOM05D005890 ORTHO05D006717 4.8e-31 139.8 97 67.0
BolC2t07586H Brassica oleracea HOM05D005890 ORTHO05D006717 4.8e-31 139.8 97 67.0
CSS0049336 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 6.2e-31 139.4 227 43.6
Lsat_1_v5_gn_5_83860 Lactuca sativa HOM05D005890 ORTHO05D006717 6.2e-31 139.4 87 75.9
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 6.2e-31 139.4 201 45.8
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 3.1e-30 137.1 504 31.0
AUR62031274 Chenopodium quinoa HOM05D005890 ORTHO05D006717 5.3e-30 136.3 193 46.1
THA.LOC104813501 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 5.3e-30 136.3 99 66.7
BcaB08g36002 Brassica carinata HOM05D005890 ORTHO05D006717 6.9e-30 136.0 95 66.3
MD16G1246300 Malus domestica HOM05D005890 ORTHO05D006717 1.2e-29 135.2 454 32.2
PSO170G0082 Papaver somniferum HOM05D005890 ORTHO05D006717 1.2e-29 135.2 116 60.3
ATR1098G092 Amborella trichopoda HOM05D005890 ORTHO05D006717 1.5e-29 134.8 257 40.1
Migut.L01872 Erythranthe guttata HOM05D005890 ORTHO05D006717 2.0e-29 134.4 416 33.4
CARHR270890 Cardamine hirsuta HOM05D005890 ORTHO05D006717 2.6e-29 134.0 125 53.6
HanXRQChr03g0065401 Helianthus annuus HOM05D005890 ORTHO05D006717 4.5e-29 133.3 421 30.2
CANSAT01G0113 Cannabis sativa HOM05D005890 ORTHO05D006717 5.8e-29 132.9 430 33.3
CiPaw.07G198700 Carya illinoinensis HOM05D005890 ORTHO05D006717 7.6e-29 132.5 410 32.0
EL10Ac8g19296 Beta vulgaris HOM05D005890 ORTHO05D006717 9.9e-29 132.1 479 33.4
Actinidia02494 Actinidia chinensis HOM05D005890 ORTHO05D006717 1.3e-28 131.7 499 30.9
BcaC04g20011 Brassica carinata HOM05D005890 ORTHO05D006717 1.3e-28 131.7 123 55.3
C09p48820 Brassica napus HOM05D005890 ORTHO05D006717 1.3e-28 131.7 123 55.3
BolC9t57729H Brassica oleracea HOM05D005890 ORTHO05D006717 1.3e-28 131.7 123 55.3
CAN.G403.1 Capsicum annuum HOM05D005890 ORTHO05D006717 1.3e-28 131.7 382 34.0
Manes.06G017800 Manihot esculenta HOM05D005890 ORTHO05D006717 1.3e-28 131.7 254 38.2
Psat4g014480 Pisum sativum HOM05D005890 ORTHO05D006717 1.3e-28 131.7 162 48.8
HanXRQChr10g0308981 Helianthus annuus HOM05D005890 ORTHO05D006717 1.7e-28 131.3 362 38.7
Peaxi162Scf00046g00417 Petunia axillaris HOM05D005890 ORTHO05D006717 1.7e-28 131.3 422 31.8
Atru.BG.17.p Acer truncatum HOM05D005890 ORTHO05D006717 2.2e-28 131.0 368 35.1
MBI14_g15782_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 2.2e-28 131.0 182 47.8
HPP92_018699 Vanilla planifolia HOM05D005890 ORTHO05D006717 2.9e-28 130.6 193 44.0
Glyma.13G101600 Glycine max HOM05D005890 ORTHO05D006717 3.8e-28 130.2 422 33.9
Prupe.1G073000 Prunus persica HOM05D005890 ORTHO05D006717 3.8e-28 130.2 441 33.1
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 3.8e-28 130.2 343 34.4
Ah.14g085350 Amaranthus hybridus HOM05D005890 ORTHO05D006717 4.9e-28 129.8 370 36.2
Medtr4g127160 Medicago truncatula HOM05D005890 ORTHO05D006717 6.4e-28 129.4 428 31.3
SGA_v2.0_scaffold41G15805 Striga asiatica HOM05D005890 ORTHO05D006717 1.1e-27 128.6 247 40.1
vmacro20806 Vaccinium macrocarpon HOM05D005890 ORTHO05D006717 1.1e-27 128.6 452 34.5
Duzib170G1164 Durio zibethinus HOM05D005890 ORTHO05D006717 1.9e-27 127.9 441 31.5
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 3.2e-27 127.1 407 33.2
AUR62027422 Chenopodium quinoa HOM05D005890 ORTHO05D006717 4.2e-27 126.7 440 31.8
Phvul.003G140452 Phaseolus vulgaris HOM05D005890 ORTHO05D006717 4.2e-27 126.7 424 31.1
ECA240G0208 Erigeron canadensis HOM05D005890 ORTHO05D006717 7.1e-27 125.9 357 32.8
Sp6g18850 Schrenkiella parvula HOM05D005890 ORTHO05D006717 9.3e-27 125.6 421 30.4
SEGI_20539 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 9.3e-27 125.6 162 49.4
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea HOM05D005890 ORTHO05D006717 1.2e-26 125.2 446 31.4
TWI34G1560 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 1.2e-26 125.2 412 35.9
Ca_21262_v3 Cicer arietinum L. HOM05D005890 ORTHO05D006717 1.6e-26 124.8 177 46.9
PGSC0003DMG400019897 Solanum tuberosum HOM05D005890 ORTHO05D006717 1.6e-26 124.8 421 32.1
Eucgr.C02214 Eucalyptus grandis HOM05D005890 ORTHO05D006717 2.1e-26 124.4 415 31.6
Gorai.012G008900 Gossypium raimondii HOM05D005890 ORTHO05D006717 2.7e-26 124.0 456 34.4
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea HOM05D005890 ORTHO05D006717 4.6e-26 123.2 441 30.8
Thhalv10013871m.g Eutrema salsugineum HOM05D005890 ORTHO05D006717 4.6e-26 123.2 377 33.2
PGR044G2166 Punica granatum HOM05D005890 ORTHO05D006717 1.8e-25 121.3 487 30.0
RcHm_v2.0_Chr4g0398981 Rosa chinensis HOM05D005890 ORTHO05D006717 1.8e-25 121.3 448 29.7
TPR.G5393 Trifolium pratense HOM05D005890 ORTHO05D006717 6.7e-25 119.4 159 46.5
Gohir.A05G408300 Gossypium hirsutum HOM05D005890 ORTHO05D006717 1.5e-24 118.2 445 34.6
Cpa.g.sc115.65 Carica papaya HOM05D005890 ORTHO05D006717 7.4e-24 115.9 384 28.4
MBI18_g10586_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 1.3e-23 115.2 538 29.4
Mapoly0009s0141 Marchantia polymorpha HOM05D005890 ORTHO05D006717 2.1e-23 114.4 142 45.1
AagrBONN_evm.TU.Sc2ySwM_368.973 Anthoceros agrestis HOM05D005890 ORTHO05D006717 6.2e-23 112.8 291 32.3
AT5G57120 Arabidopsis thaliana HOM05D005890 ORTHO05D006717 8.2e-23 112.5 99 57.6
BcaB05g22318 Brassica carinata HOM05D005890 ORTHO05D006717 8.2e-23 112.5 413 30.5
Lsat_1_v5_gn_7_55781 Lactuca sativa HOM05D005890 ORTHO05D006717 1.1e-22 112.1 426 28.9
Carub.0008s1762 Capsella rubella HOM05D005890 ORTHO05D006717 4.0e-22 110.2 125 49.6
Pp3c3_34440 Physcomitrium patens HOM05D005890 ORTHO05D006717 4.0e-22 110.2 193 41.5
Pp3c3_34441 Physcomitrium patens HOM05D005890 ORTHO05D006717 4.0e-22 110.2 193 41.5
Hund24378 Selenicereus undatus HOM05D005890 ORTHO05D006717 4.0e-22 110.2 479 28.6
PSO063G0609 Papaver somniferum HOM05D005890 ORTHO05D006717 6.9e-22 109.4 431 30.9
SEGI_22268 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 1.3e-20 105.1 64 79.7
AL8G33040 Arabidopsis lyrata HOM05D005890 ORTHO05D006717 1.7e-20 104.8 124 48.4
Zm00001eb172010 Zea mays HOM05D005890 ORTHO05D006717 1.7e-20 104.8 226 36.3
CBR_g20282 Chara braunii HOM05D000019 ORTHO05D000002 2.9e-20 104.0 71 70.4
THA.LOC104817770 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 1.1e-19 102.1 428 29.7
COL.COLO4_08570 Corchorus olitorius HOM05D005890 ORTHO05D006717 1.4e-14 85.1 569 25.7
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 2.4e-14 84.3 367 32.7
CSS0049604 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 4.1e-14 83.6 60 71.7
Haze_22044 Corylus avellana HOM05D005890 ORTHO05D006717 9.0e-14 82.4 107 42.1
Cre01.g055400 Chlamydomonas reinhardtii HOM05D005890 ORTHO05D006717 9.4e-11 72.4 96 50.0
MCO09G065 Micromonas commoda HOM05D005890 ORTHO05D006717 4.6e-10 70.1 94 50.0
Zm00001eb394450 Zea mays HOM05D014690 ORTHO05D006717 4.6e-10 70.1 52 65.4
A10p14440 Brassica napus HOM05D005890 ORTHO05D006717 3.7e-07 60.5 33 75.8
BraA10t43535Z Brassica rapa HOM05D005890 ORTHO05D006717 3.7e-07 60.5 33 75.8
DCAR_029041 Daucus carota HOM05D005890 ORTHO05D006717 6.3e-07 59.7 267 30.0
FvH4_4g06950 Fragaria vesca HOM05D005890 ORTHO05D006717 1.1e-06 58.9 316 29.1


User provided reference genes

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