Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3506 Ceratophyllum demersum HOM05D003354 ORTHO05D003786 1.5e-27 125.6 69 100.0
CDE05G0806 Ceratophyllum demersum HOM05D003354 ORTHO05D003786 7.1e-17 90.1 61 83.6
MBI06_g44270_MAGBIO Magnolia biondii HOM05D003354 ORTHO05D003786 7.1e-09 63.5 61 57.4
ClCG11G015620 Citrullus lanatus HOM05D003354 ORTHO05D003786 3.5e-08 61.2 60 56.7
MELO3C010462.2 Cucumis melo HOM05D003354 ORTHO05D003786 4.6e-08 60.8 60 56.7
CsaV3_4G028400 Cucumis sativus L. HOM05D003354 ORTHO05D003786 4.6e-08 60.8 60 56.7
TWI56G0133 Tripterygium wilfordii HOM05D003354 ORTHO05D003786 4.6e-08 60.8 59 57.6
TWI36G0704 Tripterygium wilfordii HOM05D003354 ORTHO05D003786 6.0e-08 60.5 61 55.7
TAR628G1291 Trochodendron aralioides HOM05D003354 ORTHO05D003786 6.0e-08 60.5 64 53.1
Glyma.04G251700 Glycine max HOM05D003354 ORTHO05D003786 7.9e-08 60.1 59 57.6
Glyma.06G111100 Glycine max HOM05D003354 ORTHO05D003786 7.9e-08 60.1 59 57.6
TAR376G0801 Trochodendron aralioides HOM05D003354 ORTHO05D003786 7.9e-08 60.1 64 53.1
VMungo1309G0116 Vigna mungo HOM05D003354 ORTHO05D003786 7.9e-08 60.1 59 57.6
Cpa.g.sc36.34 Carica papaya HOM05D003354 ORTHO05D003786 1.0e-07 59.7 59 54.2
MBI03_g33018_MAGBIO Magnolia biondii HOM05D003354 ORTHO05D003786 1.0e-07 59.7 64 51.6
Peaxi162Scf00051g00625 Petunia axillaris HOM05D003354 ORTHO05D003786 1.0e-07 59.7 59 54.2
TAR381G0087 Trochodendron aralioides HOM05D003354 ORTHO05D003786 1.3e-07 59.3 61 54.1
GSVIVG01008898001 Vitis vinifera HOM05D003354 ORTHO05D003786 1.8e-07 58.9 64 51.6
arahy.Tifrunner.gnm1.ann1.UWNN8R Arachis hypogaea HOM05D003354 ORTHO05D003786 2.3e-07 58.5 56 57.1
Phvul.009G123000 Phaseolus vulgaris HOM05D003354 ORTHO05D003786 2.3e-07 58.5 59 55.9
QL09p035692 Quercus lobata HOM05D003354 ORTHO05D003786 2.3e-07 58.5 59 54.2
PGSC0003DMG400017560 Solanum tuberosum HOM05D003354 ORTHO05D003786 2.3e-07 58.5 67 52.2
Aqoxy6G00175 Aquilegia oxysepala HOM05D003354 ORTHO05D003786 3.0e-07 58.2 64 46.9
Lj1g0025637 Lotus japonicus HOM05D003354 ORTHO05D003786 3.0e-07 58.2 59 55.9
EL10Ac1g00009 Beta vulgaris HOM05D003354 ORTHO05D003786 3.9e-07 57.8 59 54.2
AUR62023641 Chenopodium quinoa HOM05D003354 ORTHO05D003786 5.1e-07 57.4 59 54.2
ATR0193G028 Amborella trichopoda HOM05D002320 ORTHO05D003786 6.7e-07 57.0 67 50.7
Medtr3g072650 Medicago truncatula HOM05D003354 ORTHO05D003786 6.7e-07 57.0 59 54.2
Nitab4.5_0001035g0050 Nicotiana tabacum HOM05D003354 ORTHO05D003786 6.7e-07 57.0 56 55.4
RhsimUnG0094600 Rhododendron simsii HOM05D003354 ORTHO05D003786 6.7e-07 57.0 59 52.5
Solyc06g060410.3 Solanum lycopersicum HOM05D003354 ORTHO05D003786 6.7e-07 57.0 67 50.7
TPR.G22989 Trifolium pratense HOM05D003354 ORTHO05D003786 6.7e-07 57.0 59 54.2
Ca_13580_v3 Cicer arietinum L. HOM05D003354 ORTHO05D003786 8.7e-07 56.6 54 57.4
Migut.N03296 Erythranthe guttata HOM05D003354 ORTHO05D003786 8.7e-07 56.6 59 52.5
Manes.02G161300 Manihot esculenta HOM05D003354 ORTHO05D003786 8.7e-07 56.6 57 56.1
TWI12G1480 Tripterygium wilfordii HOM05D003354 ORTHO05D003786 8.7e-07 56.6 57 54.4
Actinidia02609 Actinidia chinensis HOM05D003354 ORTHO05D003786 1.1e-06 56.2 59 54.2
COL.COLO4_12199 Corchorus olitorius HOM05D003354 ORTHO05D003786 1.1e-06 56.2 59 54.2
Haze_00474 Corylus avellana HOM05D003354 ORTHO05D003786 1.1e-06 56.2 59 49.2
CSS0003863 Camellia sinensis var. sinensis HOM05D003354 ORTHO05D003786 1.5e-06 55.8 59 52.5
CiPaw.05G224100 Carya illinoinensis HOM05D003354 ORTHO05D003786 1.5e-06 55.8 57 54.4
CiPaw.06G027300 Carya illinoinensis HOM05D003354 ORTHO05D003786 1.5e-06 55.8 54 55.6
Nitab4.5_0001926g0040 Nicotiana tabacum HOM05D003354 ORTHO05D003786 1.5e-06 55.8 59 52.5
Sed0020239 Sechium edule HOM05D003354 ORTHO05D003786 1.5e-06 55.8 59 52.5
SEGI_09274 Sequoiadendron giganteum HOM05D002320 ORTHO05D002428 1.5e-06 55.8 60 53.3
PGSC0003DMG400000917 Solanum tuberosum HOM05D003354 ORTHO05D003786 1.5e-06 55.8 56 55.4
CSS0028880 Camellia sinensis var. sinensis HOM05D003354 ORTHO05D003786 1.9e-06 55.5 57 54.4
AUR62004722 Chenopodium quinoa HOM05D003354 ORTHO05D003786 1.9e-06 55.5 57 54.4
PSO170G6269 Papaver somniferum HOM05D003354 ORTHO05D003786 1.9e-06 55.5 57 54.4
PSO782G3162 Papaver somniferum HOM05D003354 ORTHO05D003786 1.9e-06 55.5 57 54.4
Hund16844 Selenicereus undatus HOM05D003354 ORTHO05D003786 1.9e-06 55.5 57 54.4
Sc01g0001330 Simmondsia chinensis HOM05D003354 ORTHO05D003786 1.9e-06 55.5 59 54.2
Actinidia29456 Actinidia chinensis HOM05D003354 ORTHO05D003786 2.5e-06 55.1 59 50.8
CANSAT25G2477 Cannabis sativa HOM05D003354 ORTHO05D003786 2.5e-06 55.1 59 50.8
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 2.5e-06 55.1 61 50.8
Migut.C01147 Erythranthe guttata HOM05D003354 ORTHO05D003786 2.5e-06 55.1 59 52.5
Eucgr.F03771 Eucalyptus grandis HOM05D003354 ORTHO05D003786 2.5e-06 55.1 57 52.6
PGR042G0694 Punica granatum HOM05D003354 ORTHO05D003786 2.5e-06 55.1 64 48.4
Hund27038 Selenicereus undatus HOM05D003354 ORTHO05D003786 2.5e-06 55.1 54 57.4
Sopen06g020550 Solanum pennellii HOM05D003354 ORTHO05D003786 2.5e-06 55.1 67 49.3
Cfa015992 Carpinus fangiana HOM05D003354 ORTHO05D003786 3.3e-06 54.7 59 49.2
ClCG08G005420 Citrullus lanatus HOM05D003354 ORTHO05D003786 3.3e-06 54.7 61 50.8
Gohir.A05G233600 Gossypium hirsutum HOM05D003354 ORTHO05D003786 3.3e-06 54.7 59 49.2
Gohir.D05G236000 Gossypium hirsutum HOM05D003354 ORTHO05D003786 3.3e-06 54.7 59 49.2
Gorai.009G244300 Gossypium raimondii HOM05D003354 ORTHO05D003786 3.3e-06 54.7 59 49.2
Lalb_Chr11g0065791 Lupinus albus HOM05D003354 ORTHO05D003786 3.3e-06 54.7 59 52.5
SalBow6G5532 Salvia bowleyana HOM05D003354 ORTHO05D003786 3.3e-06 54.7 59 50.8
SalBow6G6365 Salvia bowleyana HOM05D003354 ORTHO05D003786 3.3e-06 54.7 59 50.8
SalBow7G2783 Salvia bowleyana HOM05D003354 ORTHO05D003786 3.3e-06 54.7 59 52.5
Atru.chr13.1413 Acer truncatum HOM05D003354 ORTHO05D003786 4.3e-06 54.3 59 52.5
CDE08G1332 Ceratophyllum demersum HOM05D005891 ORTHO05D007214 4.3e-06 54.3 61 49.2
Dinv40396 Davidia involucrata HOM05D003354 ORTHO05D003786 4.3e-06 54.3 59 50.8
Lj1g0023829 Lotus japonicus HOM05D003354 ORTHO05D003786 4.3e-06 54.3 56 51.8
Oeu026140.1 Olea europaea HOM05D003354 ORTHO05D003786 4.3e-06 54.3 59 50.8
Oeu026141.1 Olea europaea HOM05D003354 ORTHO05D003786 4.3e-06 54.3 59 50.8
arahy.Tifrunner.gnm1.ann1.PN7YYE Arachis hypogaea HOM05D003354 ORTHO05D003786 5.6e-06 53.9 64 48.4
CAN.G513.4 Capsicum annuum HOM05D003354 ORTHO05D003786 5.6e-06 53.9 56 53.6
Cc10_g10980 Coffea canephora HOM05D003354 ORTHO05D003786 5.6e-06 53.9 64 46.9
Gohir.D06G043600 Gossypium hirsutum HOM05D003354 ORTHO05D003786 5.6e-06 53.9 57 50.9
Medtr5g058920 Medicago truncatula HOM05D003354 ORTHO05D003786 5.6e-06 53.9 59 49.2
Psat5g120760 Pisum sativum HOM05D003354 ORTHO05D003786 5.6e-06 53.9 59 52.5
unitig_0.g2122 Utricularia gibba HOM05D003354 ORTHO05D003786 5.6e-06 53.9 57 54.4
Actinidia23067 Actinidia chinensis HOM05D003354 ORTHO05D003786 7.4e-06 53.5 59 52.5
Ciclev10001096m.g Citrus clementina HOM05D003354 ORTHO05D003786 7.4e-06 53.5 57 54.4
Gorai.010G048700 Gossypium raimondii HOM05D003354 ORTHO05D003786 7.4e-06 53.5 57 50.9
Os09g0453900 Oryza sativa ssp. japonica HOM05D003354 ORTHO05D003786 7.4e-06 53.5 60 50.0
arahy.Tifrunner.gnm1.ann1.93615D Arachis hypogaea HOM05D003354 ORTHO05D003786 9.6e-06 53.1 56 51.8
arahy.Tifrunner.gnm1.ann1.EP6Q0T Arachis hypogaea HOM05D003354 ORTHO05D003786 9.6e-06 53.1 64 46.9
MSTRG.22417 Avicennia marina HOM05D003354 ORTHO05D003786 9.6e-06 53.1 57 50.9
CAN.G1396.6 Capsicum annuum HOM05D003354 ORTHO05D003786 9.6e-06 53.1 59 49.2
MELO3C011588.2 Cucumis melo HOM05D003354 ORTHO05D003786 9.6e-06 53.1 61 49.2
CsaV3_6G003600 Cucumis sativus L. HOM05D003354 ORTHO05D003786 9.6e-06 53.1 51 56.9


User provided reference genes

Program Settings