Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3496 Ceratophyllum demersum HOM05D006336 ORTHO05D007819 3.0e-128 461.8 233 100.0
CDE05G3418 Ceratophyllum demersum HOM05D006336 ORTHO05D007819 2.3e-91 339.3 346 57.8
MBI13_g01670_MAGBIO Magnolia biondii HOM05D006336 ORTHO05D007819 6.0e-52 208.4 349 36.1
Nn6g35635 Nelumbo nucifera HOM05D006336 ORTHO05D007819 2.3e-51 206.5 341 37.0
TAR624G1124 Trochodendron aralioides HOM05D006336 ORTHO05D007819 1.9e-50 203.4 318 38.7
PSO135G0459 Papaver somniferum HOM05D006336 ORTHO05D007819 2.5e-50 203.0 340 37.1
Dinv09419 Davidia involucrata HOM05D006336 ORTHO05D007819 4.3e-50 202.2 327 39.1
Rhsim03G0050100 Rhododendron simsii HOM05D006336 ORTHO05D007819 4.8e-49 198.7 327 39.1
MSTRG.11848 Avicennia marina HOM05D006336 ORTHO05D007819 1.1e-48 197.6 329 35.9
HanXRQChr03g0084651 Helianthus annuus HOM05D006336 ORTHO05D007819 1.2e-47 194.1 329 37.7
Cpa.g.sc82.21 Carica papaya HOM05D006336 ORTHO05D007819 3.4e-47 192.6 342 36.0
Hma1.2p1_0262F.1_g105216 Hydrangea macrophylla HOM05D006336 ORTHO05D007819 3.4e-47 192.6 331 37.8
PGR044G0762 Punica granatum HOM05D006336 ORTHO05D007819 5.8e-47 191.8 341 34.6
Phvul.001G044100 Phaseolus vulgaris HOM05D006336 ORTHO05D007819 1.0e-46 191.0 329 35.6
TAR636G2611 Trochodendron aralioides HOM05D006336 ORTHO05D007819 1.3e-46 190.7 339 35.4
GSVIVG01035507001 Vitis vinifera HOM05D006336 ORTHO05D007819 2.9e-46 189.5 348 35.1
CANSAT25G0260 Cannabis sativa HOM05D006336 ORTHO05D007819 3.8e-46 189.1 327 36.1
Glyma.17G220200 Glycine max HOM05D006336 ORTHO05D007819 3.8e-46 189.1 329 35.9
Cfa017842 Carpinus fangiana HOM05D006336 ORTHO05D007819 4.9e-46 188.7 330 35.5
ClCG05G015960 Citrullus lanatus HOM05D006336 ORTHO05D007819 8.4e-46 188.0 339 34.2
THA.LOC104799597 Tarenaya hassleriana HOM05D006336 ORTHO05D007819 8.4e-46 188.0 336 35.1
ECA240G3698 Erigeron canadensis HOM05D006336 ORTHO05D007819 1.1e-45 187.6 336 35.4
FAN27G0198 Fragaria x ananassa HOM05D006336 ORTHO05D007819 1.1e-45 187.6 331 36.0
Oeu047793.1 Olea europaea HOM05D006336 ORTHO05D007819 1.4e-45 187.2 330 34.8
SGA_v2.0_scaffold89G27365 Striga asiatica HOM05D006336 ORTHO05D007819 1.4e-45 187.2 335 34.3
VMungo0647G1288 Vigna mungo HOM05D006336 ORTHO05D007819 3.2e-45 186.0 329 35.6
Gohir.D06G080900 Gossypium hirsutum HOM05D006336 ORTHO05D007819 5.5e-45 185.3 328 35.7
Gorai.010G094300 Gossypium raimondii HOM05D006336 ORTHO05D007819 5.5e-45 185.3 328 35.7
Aqoxy7G04150 Aquilegia oxysepala HOM05D006336 ORTHO05D007819 9.3e-45 184.5 371 33.2
COL.COLO4_21171 Corchorus olitorius HOM05D006336 ORTHO05D007819 9.3e-45 184.5 328 35.1
Eucgr.C03178 Eucalyptus grandis HOM05D006336 ORTHO05D007819 9.3e-45 184.5 328 35.1
Medtr1g014730 Medicago truncatula HOM05D006336 ORTHO05D007819 9.3e-45 184.5 339 33.9
Sed0027870 Sechium edule HOM05D006336 ORTHO05D007819 9.3e-45 184.5 339 34.8
Lsat_1_v5_gn_6_74301 Lactuca sativa HOM05D006336 ORTHO05D007819 1.6e-44 183.7 336 35.7
Ca_13088_v3 Cicer arietinum L. HOM05D006336 ORTHO05D007819 2.1e-44 183.3 328 35.7
FvH4_2g37050 Fragaria vesca HOM05D006336 ORTHO05D007819 2.7e-44 183.0 332 35.5
Lj8C369G2 Lonicera japonica HOM05D006336 ORTHO05D007819 3.5e-44 182.6 329 35.3
TWI32G0525 Tripterygium wilfordii HOM05D006336 ORTHO05D007819 3.5e-44 182.6 339 34.2
ATR0681G177 Amborella trichopoda HOM05D006336 ORTHO05D007819 4.6e-44 182.2 335 33.1
CiPaw.13G138600 Carya illinoinensis HOM05D006336 ORTHO05D007819 4.6e-44 182.2 337 34.4
MD08G1047000 Malus domestica HOM05D006336 ORTHO05D007819 6.0e-44 181.8 340 34.1
SalBow4G0695 Salvia bowleyana HOM05D006336 ORTHO05D007819 7.9e-44 181.4 329 35.0
DCAR_002185 Daucus carota HOM05D006336 ORTHO05D007819 1.0e-43 181.0 350 34.0
Potri.006G217700 Populus trichocarpa HOM05D006336 ORTHO05D007819 1.0e-43 181.0 330 34.5
Sabra06G0167900 Salix brachista HOM05D006336 ORTHO05D007819 1.0e-43 181.0 349 35.0
Sopen08g023730 Solanum pennellii HOM05D006336 ORTHO05D007819 1.0e-43 181.0 329 35.3
PGSC0003DMG400020818 Solanum tuberosum HOM05D006336 ORTHO05D007819 1.8e-43 180.3 338 34.9
CAN.G22.30 Capsicum annuum HOM05D006336 ORTHO05D007819 2.3e-43 179.9 338 34.3
MELO3C016932.2 Cucumis melo HOM05D006336 ORTHO05D007819 2.3e-43 179.9 339 33.3
RcHm_v2.0_Chr6g0304731 Rosa chinensis HOM05D006336 ORTHO05D007819 3.0e-43 179.5 325 35.1
Atru.chr7.1812 Acer truncatum HOM05D006336 ORTHO05D007819 3.9e-43 179.1 339 33.6
CsaV3_4G036230 Cucumis sativus L. HOM05D006336 ORTHO05D007819 3.9e-43 179.1 339 32.7
TPR.G38941 Trifolium pratense HOM05D006336 ORTHO05D007819 5.1e-43 178.7 342 34.5
Nitab4.5_0008763g0010 Nicotiana tabacum HOM05D006336 ORTHO05D007819 6.7e-43 178.3 342 33.6
unitig_32.g10956 Utricularia gibba HOM05D006336 ORTHO05D007819 6.7e-43 178.3 329 34.3
EL10Ac5g11099 Beta vulgaris HOM05D006336 ORTHO05D007819 8.7e-43 177.9 320 34.4
Lalb_Chr24g0393711 Lupinus albus HOM05D006336 ORTHO05D007819 8.7e-43 177.9 328 34.5
Migut.A00484 Erythranthe guttata HOM05D006336 ORTHO05D007819 1.1e-42 177.6 330 32.4
Gohir.A06G081300 Gossypium hirsutum HOM05D006336 ORTHO05D007819 1.9e-42 176.8 328 34.1
Duzib187G1166 Durio zibethinus HOM05D006336 ORTHO05D007819 2.5e-42 176.4 339 33.9
arahy.Tifrunner.gnm1.ann1.6DI6VD Arachis hypogaea HOM05D006336 ORTHO05D007819 1.6e-41 173.7 342 33.9
Lj5g0013864 Lotus japonicus HOM05D006336 ORTHO05D007819 2.8e-41 172.9 329 35.0
AUR62021599 Chenopodium quinoa HOM05D006336 ORTHO05D007819 1.8e-40 170.2 179 50.3
arahy.Tifrunner.gnm1.ann1.YUGK7S Arachis hypogaea HOM05D006336 ORTHO05D007819 1.5e-39 167.2 329 33.4
C03p68560 Brassica napus HOM05D006336 ORTHO05D007819 1.5e-39 167.2 328 31.7
Aa31LG4G13380 Aethionema arabicum HOM05D006336 ORTHO05D007819 2.0e-39 166.8 340 31.5
Ah.11g048000 Amaranthus hybridus HOM05D006336 ORTHO05D007819 3.4e-39 166.0 338 32.8
BcaC01g02096 Brassica carinata HOM05D006336 ORTHO05D007819 3.4e-39 166.0 328 31.7
A06p22570 Brassica napus HOM05D006336 ORTHO05D007819 3.4e-39 166.0 328 31.7
BolC3t19114H Brassica oleracea HOM05D006336 ORTHO05D007819 3.4e-39 166.0 328 31.7
BraA06t25331Z Brassica rapa HOM05D006336 ORTHO05D007819 3.4e-39 166.0 328 31.7
Sp5g17620 Schrenkiella parvula HOM05D006336 ORTHO05D007819 4.5e-39 165.6 342 30.7
AT3G43540 Arabidopsis thaliana HOM05D006336 ORTHO05D007819 1.0e-38 164.5 332 31.3
AL5G21500 Arabidopsis lyrata HOM05D006336 ORTHO05D007819 1.3e-38 164.1 342 31.0
Carub.0005s0929 Capsella rubella HOM05D006336 ORTHO05D007819 1.3e-38 164.1 342 31.0
Hund02606 Selenicereus undatus HOM05D006336 ORTHO05D007819 1.3e-38 164.1 321 34.0
Thhalv10002575m.g Eutrema salsugineum HOM05D006336 ORTHO05D007819 2.2e-38 163.3 327 32.1
vmacro07660 Vaccinium macrocarpon HOM05D006336 ORTHO05D007819 2.2e-38 163.3 382 31.7
Ciclev10009629m.g Citrus clementina HOM05D006336 ORTHO05D007819 2.9e-38 162.9 178 46.6
CSS0028971 Camellia sinensis var. sinensis HOM05D006336 ORTHO05D007819 3.8e-38 162.5 296 35.8
CARHR098720 Cardamine hirsuta HOM05D006336 ORTHO05D007819 8.5e-38 161.4 342 29.5
BcaB01g01223 Brassica carinata HOM05D006336 ORTHO05D007819 1.1e-37 161.0 328 31.4
Cc08_g04560 Coffea canephora HOM05D006336 ORTHO05D007819 1.4e-37 160.6 181 44.2
Prupe.1G401200 Prunus persica HOM05D006336 ORTHO05D007819 9.3e-37 157.9 178 47.2
Sc04g0003070 Simmondsia chinensis HOM05D006336 ORTHO05D007819 3.6e-36 156.0 347 31.1
Cc08_g04580 Coffea canephora HOM05D006336 ORTHO05D007819 3.0e-35 152.9 179 44.1
Dinv37442 Davidia involucrata HOM05D006336 ORTHO05D007819 2.5e-34 149.8 288 35.8
Zm00001eb313900 Zea mays HOM05D006336 ORTHO05D007819 1.1e-32 144.4 314 32.2
Psat6g024200 Pisum sativum HOM05D006336 ORTHO05D007819 4.1e-32 142.5 289 32.2
Solyc08g075100.4 Solanum lycopersicum HOM05D006336 ORTHO05D007819 4.1e-32 142.5 287 33.8
Cc08_g04540 Coffea canephora HOM05D006336 ORTHO05D007819 1.5e-31 140.6 154 46.8
FAN15G0772 Fragaria x ananassa HOM05D006336 ORTHO05D007819 4.5e-31 139.0 163 47.2
Carub.0251s0001 Capsella rubella HOM05D006336 ORTHO05D007819 2.9e-30 136.3 171 40.4
Manes.03G055500 Manihot esculenta HOM05D006336 ORTHO05D007819 1.1e-29 134.4 302 30.8
Actinidia27818 Actinidia chinensis HOM05D006336 ORTHO05D007819 5.5e-29 132.1 173 45.7
Peaxi162Scf00014g01816 Petunia axillaris HOM05D006336 ORTHO05D007819 1.2e-28 131.0 244 36.1
Cc00_g23060 Coffea canephora HOM05D006336 ORTHO05D007819 1.4e-27 127.5 141 45.4
Cc08_g04510 Coffea canephora HOM05D006336 ORTHO05D007819 2.3e-27 126.7 141 44.7
HPP92_019316 Vanilla planifolia HOM05D006336 ORTHO05D007819 6.3e-25 118.6 114 49.1
Pp3c1_38250 Physcomitrium patens HOM05D006336 ORTHO05D007819 1.2e-23 114.4 181 34.8
SMO351G0262 Selaginella moellendorffii HOM05D006336 ORTHO05D007819 7.7e-23 111.7 133 39.8
AagrBONN_evm.TU.Sc2ySwM_362.2113 Anthoceros agrestis HOM05D006336 ORTHO05D007819 2.1e-20 103.6 176 31.8
Mapoly0124s0049 Marchantia polymorpha HOM05D006336 ORTHO05D007819 6.1e-20 102.1 180 32.8
Nitab4.5_0008291g0020 Nicotiana tabacum HOM05D006336 ORTHO05D007819 6.1e-20 102.1 145 40.7
CBR_g30757 Chara braunii HOM05D006336 ORTHO05D007819 8.0e-20 101.7 239 27.2
Glyma.06G258800 Glycine max HOM05D006336 ORTHO05D007819 9.1e-16 88.2 108 44.4
PGSC0003DMG400020816 Solanum tuberosum HOM05D006336 ORTHO05D007819 1.3e-14 84.3 240 28.3
Thecc.09G066700 Theobroma cacao HOM05D006336 ORTHO05D007819 6.1e-12 75.5 231 25.5
Ah.01g016210 Amaranthus hybridus HOM05D006336 ORTHO05D007819 1.4e-11 74.3 156 35.3
Cre06.g278264 Chlamydomonas reinhardtii HOM05D006336 ORTHO05D007819 1.5e-10 70.9 169 29.0
Cc00_g35650 Coffea canephora HOM05D006336 ORTHO05D007819 1.3e-09 67.8 62 45.2
Hma1.2p1_1969F.1_g309520 Hydrangea macrophylla HOM05D006336 ORTHO05D007819 2.2e-09 67.0 51 60.8
Nitab4.5_0024082g0010 Nicotiana tabacum HOM05D006336 ORTHO05D007819 4.8e-09 65.9 61 44.3
HPP92_019279 Vanilla planifolia HOM05D006336 ORTHO05D007819 2.7e-07 60.1 41 61.0
HPP92_019317 Vanilla planifolia HOM05D006336 ORTHO05D007819 2.7e-07 60.1 41 61.0
Lsat_1_v5_gn_6_25780 Lactuca sativa HOM05D006336 ORTHO05D007819 3.5e-07 59.7 38 63.2
Cc08_g04520 Coffea canephora HOM05D006336 ORTHO05D007819 5.9e-07 58.9 41 58.5
unitig_747.g21105 Utricularia gibba HOM05D005986 ORTHO05D007467 1.7e-06 57.4 170 30.6
Psat6g117360 Pisum sativum HOM05D002321 ORTHO05D007292 6.5e-06 55.5 53 52.8
MCO06G181 Micromonas commoda HOM05D005986 ORTHO05D007467 8.5e-06 55.1 258 22.9


User provided reference genes

Program Settings