Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3495 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 3.1e-50 201.4 99 100.0
CDE02G3899 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 1.6e-14 82.8 60 75.0
ATR0561G204 Amborella trichopoda HOM05D006087 ORTHO05D007479 1.9e-10 69.3 56 66.1
MD13G1119200 Malus domestica HOM05D006087 ORTHO05D007479 2.1e-09 65.9 57 61.4
Prupe.1G225600 Prunus persica HOM05D006087 ORTHO05D007479 3.5e-09 65.1 57 61.4
CiPaw.06G102800 Carya illinoinensis HOM05D006087 ORTHO05D007479 7.8e-09 63.9 56 58.9
TPR.G17782 Trifolium pratense HOM05D006087 ORTHO05D007479 7.8e-09 63.9 56 60.7
TAR622G0081 Trochodendron aralioides HOM05D006087 ORTHO05D007479 7.8e-09 63.9 56 60.7
Cfa009371 Carpinus fangiana HOM05D006087 ORTHO05D007479 1.3e-08 63.2 56 58.9
Ca_16458_v3 Cicer arietinum L. HOM05D006087 ORTHO05D007479 1.3e-08 63.2 56 58.9
Haze_12421 Corylus avellana HOM05D006087 ORTHO05D007479 1.3e-08 63.2 56 58.9
TWI75G0102 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 1.3e-08 63.2 57 59.6
MELO3C011864.2 Cucumis melo HOM05D006087 ORTHO05D007479 1.7e-08 62.8 56 58.9
TAR374G1631 Trochodendron aralioides HOM05D006087 ORTHO05D007479 1.7e-08 62.8 54 61.1
CsaV3_5G030260 Cucumis sativus L. HOM05D006087 ORTHO05D007479 2.3e-08 62.4 56 58.9
THA.LOC104812595 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 2.3e-08 62.4 56 57.1
Eucgr.B03495 Eucalyptus grandis HOM05D006087 ORTHO05D007479 3.0e-08 62.0 56 58.9
Sp2g08050 Schrenkiella parvula HOM05D006087 ORTHO05D007479 3.0e-08 62.0 57 61.4
TWI18G0911 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 3.0e-08 62.0 57 57.9
AL8G17230 Arabidopsis lyrata HOM05D006087 ORTHO05D007479 3.9e-08 61.6 56 57.1
Psat5g096360 Pisum sativum HOM05D006087 ORTHO05D007479 3.9e-08 61.6 56 57.1
QL03p052667 Quercus lobata HOM05D006087 ORTHO05D007479 3.9e-08 61.6 56 58.9
A06p47950 Brassica napus HOM05D006087 ORTHO05D007479 5.1e-08 61.2 57 61.4
C07p25860 Brassica napus HOM05D006087 ORTHO05D007479 5.1e-08 61.2 57 61.4
BolC7t43103H Brassica oleracea HOM05D006087 ORTHO05D007479 5.1e-08 61.2 57 61.4
BraA06t27665Z Brassica rapa HOM05D006087 ORTHO05D007479 5.1e-08 61.2 57 61.4
CARHR180610 Cardamine hirsuta HOM05D006087 ORTHO05D007479 5.1e-08 61.2 56 57.1
MBI11_g05327_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 5.1e-08 61.2 88 46.6
Gohir.A12G148826 Gossypium hirsutum HOM05D006087 ORTHO05D007479 6.6e-08 60.8 56 57.1
Gohir.D12G152800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 8.6e-08 60.5 56 57.1
Gorai.008G165300 Gossypium raimondii HOM05D006087 ORTHO05D007479 8.6e-08 60.5 56 57.1
AT5G43260 Arabidopsis thaliana HOM05D006087 ORTHO05D007479 1.1e-07 60.1 56 53.6
Duzib251G0251 Durio zibethinus HOM05D006087 ORTHO05D007479 1.1e-07 60.1 56 57.1
Glyma.18G006400 Glycine max HOM05D006087 ORTHO05D007479 1.1e-07 60.1 56 57.1
MBI11_g44422_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 1.1e-07 60.1 53 64.2
Manes.12G011100 Manihot esculenta HOM05D006087 ORTHO05D007479 1.1e-07 60.1 56 57.1
Phvul.001G262000 Phaseolus vulgaris HOM05D006087 ORTHO05D007479 1.1e-07 60.1 56 55.4
Lalb_Chr12g0206161 Lupinus albus HOM05D006087 ORTHO05D007479 1.5e-07 59.7 56 55.4
Ah.03g136140 Amaranthus hybridus HOM05D006087 ORTHO05D007479 1.9e-07 59.3 59 52.5
BcaC04g21941 Brassica carinata HOM05D006087 ORTHO05D007479 1.9e-07 59.3 57 57.9
C09p25630 Brassica napus HOM05D006087 ORTHO05D007479 1.9e-07 59.3 57 57.9
BolC9t55466H Brassica oleracea HOM05D006087 ORTHO05D007479 1.9e-07 59.3 57 57.9
Gohir.A04G139600 Gossypium hirsutum HOM05D006087 ORTHO05D007479 1.9e-07 59.3 57 56.1
Glyma.11G250700 Glycine max HOM05D006087 ORTHO05D007479 2.5e-07 58.9 56 55.4
Carub.0008s0544 Capsella rubella HOM05D006087 ORTHO05D007479 3.3e-07 58.5 57 54.4
COL.COLO4_20404 Corchorus olitorius HOM05D006087 ORTHO05D007479 3.3e-07 58.5 56 55.4
Gohir.D04G182800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 4.3e-07 58.2 54 57.4
Gorai.012G175800 Gossypium raimondii HOM05D006087 ORTHO05D007479 4.3e-07 58.2 54 57.4
Ah.02g130900 Amaranthus hybridus HOM05D006087 ORTHO05D007479 5.6e-07 57.8 56 51.8
BraA09t37633Z Brassica rapa HOM05D006087 ORTHO05D007479 5.6e-07 57.8 57 57.9
MD16G1119600 Malus domestica HOM05D006087 ORTHO05D007479 5.6e-07 57.8 57 54.4
Medtr3g085300 Medicago truncatula HOM05D006087 ORTHO05D007479 5.6e-07 57.8 57 56.1
Sc04g0010140 Simmondsia chinensis HOM05D006087 ORTHO05D007479 5.6e-07 57.8 56 55.4
THA.LOC104820522 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 5.6e-07 57.8 56 53.6
BcaB07g31021 Brassica carinata HOM05D006087 ORTHO05D007479 7.3e-07 57.4 57 56.1
A09p20220 Brassica napus HOM05D006087 ORTHO05D007479 9.5e-07 57.0 57 57.9
Cpa.g.sc43.59 Carica papaya HOM05D006087 ORTHO05D007479 9.5e-07 57.0 56 55.4
Duzib248G0070 Durio zibethinus HOM05D006087 ORTHO05D007479 9.5e-07 57.0 56 53.6
Lalb_Chr23g0278081 Lupinus albus HOM05D006087 ORTHO05D007479 1.2e-06 56.6 56 55.4
Potri.001G056601 Populus trichocarpa HOM05D006087 ORTHO05D007479 1.2e-06 56.6 54 59.3
Potri.003G171800 Populus trichocarpa HOM05D006087 ORTHO05D007479 1.2e-06 56.6 56 57.1
Thecc.02G208200 Theobroma cacao HOM05D006087 ORTHO05D007479 1.2e-06 56.6 56 55.4
CiPaw.05G109600 Carya illinoinensis HOM05D006087 ORTHO05D007479 1.6e-06 56.2 56 53.6
Atru.chr11.2326 Acer truncatum HOM05D006087 ORTHO05D007479 2.1e-06 55.8 54 53.7
Ciclev10033174m.g Citrus clementina HOM05D006087 ORTHO05D007479 2.1e-06 55.8 56 53.6
Aa31LG9G13330 Aethionema arabicum HOM05D006087 ORTHO05D007479 2.8e-06 55.5 56 57.1
ClCG08G017160 Citrullus lanatus HOM05D006087 ORTHO05D007479 2.8e-06 55.5 55 58.2
Lj4g0011842 Lotus japonicus HOM05D006087 ORTHO05D007479 3.6e-06 55.1 57 52.6
TWI36G1569 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 3.6e-06 55.1 60 53.3
Hma1.2p1_0065F.1_g035460 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 4.7e-06 54.7 56 57.1
EL10Ac6g13503 Beta vulgaris HOM05D006087 ORTHO05D007479 6.2e-06 54.3 56 51.8
CsaV3_2G025430 Cucumis sativus L. HOM05D006087 ORTHO05D007479 6.2e-06 54.3 54 59.3
Duzib268G0474 Durio zibethinus HOM05D006087 ORTHO05D007479 6.2e-06 54.3 53 54.7
MD05G1114700 Malus domestica HOM05D006087 ORTHO05D007479 6.2e-06 54.3 44 61.4
Aqoxy5G03370 Aquilegia oxysepala HOM05D006087 ORTHO05D007479 8.1e-06 53.9 55 54.5
RcHm_v2.0_Chr4g0430231 Rosa chinensis HOM05D006087 ORTHO05D007479 8.1e-06 53.9 57 54.4


User provided reference genes

Program Settings