Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3479 Ceratophyllum demersum HOM05D006046 ORTHO05D007580 3.5e-92 341.7 178 100.0
CDE11G0173 Ceratophyllum demersum HOM05D006046 ORTHO05D007580 1.4e-72 276.6 163 89.6
Nn4g25300 Nelumbo nucifera HOM05D006046 ORTHO05D007580 1.8e-40 169.9 129 66.7
TAR633G1601 Trochodendron aralioides HOM05D006046 ORTHO05D007580 3.1e-40 169.1 160 60.0
TAR362G0326 Trochodendron aralioides HOM05D006046 ORTHO05D007580 4.0e-40 168.7 134 67.2
MD09G1291200 Malus domestica HOM05D006046 ORTHO05D007580 5.5e-37 158.3 125 66.4
Gohir.D11G110200 Gossypium hirsutum HOM05D006046 ORTHO05D007580 1.0e-35 154.1 136 64.0
Gorai.007G117800 Gossypium raimondii HOM05D006046 ORTHO05D007580 1.0e-35 154.1 136 64.0
HanXRQChr10g0286481 Helianthus annuus HOM05D006046 ORTHO05D007580 1.0e-35 154.1 107 72.9
Prupe.3G001700 Prunus persica HOM05D006046 ORTHO05D007580 2.3e-35 152.9 107 71.0
Cpa.g.sc57.26 Carica papaya HOM05D006046 ORTHO05D007580 3.0e-35 152.5 122 64.8
Potri.002G186300 Populus trichocarpa HOM05D006046 ORTHO05D007580 3.0e-35 152.5 129 62.0
MELO3C005189.2 Cucumis melo HOM05D006046 ORTHO05D007580 3.9e-35 152.1 113 67.3
Thecc.01G326200 Theobroma cacao HOM05D006046 ORTHO05D007580 3.9e-35 152.1 107 73.8
CsaV3_5G018640 Cucumis sativus L. HOM05D006046 ORTHO05D007580 5.1e-35 151.8 138 62.3
Gohir.A11G105300 Gossypium hirsutum HOM05D006046 ORTHO05D007580 8.7e-35 151.0 136 64.0
Manes.05G008200 Manihot esculenta HOM05D006046 ORTHO05D007580 8.7e-35 151.0 126 61.1
Atru.chr5.852 Acer truncatum HOM05D006046 ORTHO05D007580 1.9e-34 149.8 124 63.7
Ciclev10019590m.g Citrus clementina HOM05D006046 ORTHO05D007580 2.5e-34 149.4 113 67.3
PSO761G0347 Papaver somniferum HOM05D006046 ORTHO05D007580 3.3e-34 149.1 123 61.8
Duzib138G1207 Durio zibethinus HOM05D006046 ORTHO05D007580 4.3e-34 148.7 142 60.6
Sed0002893 Sechium edule HOM05D006046 ORTHO05D007580 4.3e-34 148.7 106 72.6
Lsat_1_v5_gn_9_7041 Lactuca sativa HOM05D006046 ORTHO05D007580 5.7e-34 148.3 152 56.6
COL.COLO4_23120 Corchorus olitorius HOM05D006046 ORTHO05D007580 9.7e-34 147.5 133 64.7
Hund03590 Selenicereus undatus HOM05D006046 ORTHO05D007580 9.7e-34 147.5 108 63.0
ECA247G1361 Erigeron canadensis HOM05D006046 ORTHO05D007580 1.3e-33 147.1 107 70.1
Medtr1g085730 Medicago truncatula HOM05D006046 ORTHO05D007580 1.6e-33 146.7 109 67.0
Actinidia21336 Actinidia chinensis HOM05D006046 ORTHO05D007580 2.2e-33 146.4 79 86.1
FAN26G1773 Fragaria x ananassa HOM05D006046 ORTHO05D007580 2.2e-33 146.4 146 56.8
arahy.Tifrunner.gnm1.ann1.11DDVR Arachis hypogaea HOM05D006046 ORTHO05D007580 2.8e-33 146.0 113 66.4
CiPaw.07G126200 Carya illinoinensis HOM05D006046 ORTHO05D007580 2.8e-33 146.0 165 53.9
Potri.014G111600 Populus trichocarpa HOM05D006046 ORTHO05D007580 2.8e-33 146.0 142 55.6
Sabra02G0148100 Salix brachista HOM05D006046 ORTHO05D007580 3.7e-33 145.6 111 64.9
Sabra02G0148500 Salix brachista HOM05D006046 ORTHO05D007580 3.7e-33 145.6 111 64.9
FvH4_1g26170 Fragaria vesca HOM05D006046 ORTHO05D007580 4.8e-33 145.2 146 56.8
FAN19G1511 Fragaria x ananassa HOM05D006046 ORTHO05D007580 4.8e-33 145.2 146 56.8
Rhsim01G0000700 Rhododendron simsii HOM05D006046 ORTHO05D007580 4.8e-33 145.2 113 67.3
arahy.Tifrunner.gnm1.ann1.01TYUM Arachis hypogaea HOM05D006046 ORTHO05D007580 6.3e-33 144.8 81 82.7
Duzib133G1070 Durio zibethinus HOM05D006046 ORTHO05D007580 6.3e-33 144.8 136 61.0
FAN23G1049 Fragaria x ananassa HOM05D006046 ORTHO05D007580 6.3e-33 144.8 146 56.2
FAN28G0956 Fragaria x ananassa HOM05D006046 ORTHO05D007580 1.1e-32 144.1 146 55.5
PGR142G1127 Punica granatum HOM05D006046 ORTHO05D007580 1.1e-32 144.1 134 60.4
Glyma.10G138600 Glycine max HOM05D006046 ORTHO05D007580 1.4e-32 143.7 105 71.4
Phvul.007G208700 Phaseolus vulgaris HOM05D006046 ORTHO05D007580 1.4e-32 143.7 120 62.5
Sed0026667 Sechium edule HOM05D006046 ORTHO05D007580 1.8e-32 143.3 135 60.0
GSVIVG01028241001 Vitis vinifera HOM05D006046 ORTHO05D007580 1.8e-32 143.3 135 62.2
CSS0022330 Camellia sinensis var. sinensis HOM05D006046 ORTHO05D007580 2.4e-32 142.9 172 53.5
TPR.G3061 Trifolium pratense HOM05D006046 ORTHO05D007580 2.4e-32 142.9 111 65.8
Psat6g158600 Pisum sativum HOM05D006046 ORTHO05D007580 3.1e-32 142.5 132 59.1
RcHm_v2.0_Chr3g0485661 Rosa chinensis HOM05D006046 ORTHO05D007580 4.1e-32 142.1 145 57.9
CARHR249980 Cardamine hirsuta HOM05D006046 ORTHO05D007580 5.3e-32 141.7 120 61.7
Eucgr.K00558 Eucalyptus grandis HOM05D006046 ORTHO05D007580 5.3e-32 141.7 118 62.7
Dinv33175 Davidia involucrata HOM05D006046 ORTHO05D007580 6.9e-32 141.4 171 53.8
Migut.D00009 Erythranthe guttata HOM05D006046 ORTHO05D007580 2.6e-31 139.4 107 64.5
Thhalv10028544m.g Eutrema salsugineum HOM05D006046 ORTHO05D007580 2.6e-31 139.4 107 66.4
THA.LOC104825927 Tarenaya hassleriana HOM05D006046 ORTHO05D007580 2.6e-31 139.4 82 80.5
MSTRG.18059 Avicennia marina HOM05D006046 ORTHO05D007580 3.4e-31 139.0 134 58.2
AL6G51640 Arabidopsis lyrata HOM05D006046 ORTHO05D007580 4.5e-31 138.7 107 63.6
A10p01090 Brassica napus HOM05D006046 ORTHO05D007580 4.5e-31 138.7 117 63.2
BraA10t42387Z Brassica rapa HOM05D006046 ORTHO05D007580 4.5e-31 138.7 117 63.2
PSO210G0070 Papaver somniferum HOM05D006046 ORTHO05D007580 4.5e-31 138.7 165 50.3
AT4G01690 Arabidopsis thaliana HOM05D006046 ORTHO05D007580 5.9e-31 138.3 107 63.6
ATR0796G090 Amborella trichopoda HOM05D006046 ORTHO05D007580 7.6e-31 137.9 147 55.8
Sp6g01580 Schrenkiella parvula HOM05D006046 ORTHO05D007580 7.6e-31 137.9 82 78.0
Aqoxy5G02854 Aquilegia oxysepala HOM05D006046 ORTHO05D007580 1.3e-30 137.1 136 55.9
QL12p035018 Quercus lobata HOM05D006046 ORTHO05D007580 1.3e-30 137.1 162 51.2
Aa31LG5G1400 Aethionema arabicum HOM05D006046 ORTHO05D007580 1.7e-30 136.7 107 62.6
HPP92_010589 Vanilla planifolia HOM05D006046 ORTHO05D007580 1.7e-30 136.7 83 75.9
SGA_v2.0_scaffold572G52966 Striga asiatica HOM05D006046 ORTHO05D007580 2.2e-30 136.3 136 56.6
Carub.0006s3551 Capsella rubella HOM05D006046 ORTHO05D007580 3.8e-30 135.6 107 63.6
AagrBONN_evm.TU.Sc2ySwM_368.2775 Anthoceros agrestis HOM05D006046 ORTHO05D007580 5.0e-30 135.2 116 56.9
CANSAT25G3010 Cannabis sativa HOM05D006046 ORTHO05D007580 5.0e-30 135.2 142 56.3
Lalb_Chr21g0309871 Lupinus albus HOM05D006046 ORTHO05D007580 6.5e-30 134.8 100 70.0
C05p01130 Brassica napus HOM05D006046 ORTHO05D007580 8.5e-30 134.4 81 77.8
BolC5t28894H Brassica oleracea HOM05D006046 ORTHO05D007580 8.5e-30 134.4 81 77.8
Zm00001eb332380 Zea mays HOM05D006046 ORTHO05D007580 8.5e-30 134.4 108 65.7
BcaC05g24615 Brassica carinata HOM05D006046 ORTHO05D007580 1.1e-29 134.0 80 78.8
Sabra14G0082000 Salix brachista HOM05D006046 ORTHO05D007580 1.1e-29 134.0 151 51.7
DCAR_002940 Daucus carota HOM05D006046 ORTHO05D007580 1.4e-29 133.7 147 54.4
TWI59G0782 Tripterygium wilfordii HOM05D006046 ORTHO05D007580 3.2e-29 132.5 104 65.4
Pp3c1_34400 Physcomitrium patens HOM05D006046 ORTHO05D007580 7.2e-29 131.3 101 63.4
SMO356G0553 Selaginella moellendorffii HOM05D006046 ORTHO05D007580 9.3e-29 131.0 158 48.1
Cc01_g21760 Coffea canephora HOM05D006046 ORTHO05D007580 1.2e-28 130.6 124 55.6
Os01g0286600 Oryza sativa ssp. japonica HOM05D006046 ORTHO05D007580 1.6e-28 130.2 85 76.5
Ah.12g061390 Amaranthus hybridus HOM05D006046 ORTHO05D007580 2.1e-28 129.8 145 51.7
VMungo0720G0414 Vigna mungo HOM05D006046 ORTHO05D007580 4.6e-28 128.6 125 59.2
AUR62040510 Chenopodium quinoa HOM05D006046 ORTHO05D007580 7.9e-28 127.9 80 75.0
Lalb_Chr02g0147181 Lupinus albus HOM05D006046 ORTHO05D007580 7.9e-28 127.9 117 59.8
Sopen01g030600 Solanum pennellii HOM05D006046 ORTHO05D007580 7.9e-28 127.9 168 47.6
EL10Ac2g02399 Beta vulgaris HOM05D006046 ORTHO05D007580 1.8e-27 126.7 83 73.5
AUR62042113 Chenopodium quinoa HOM05D006046 ORTHO05D007580 1.8e-27 126.7 146 50.7
Lj5g0023586 Lotus japonicus HOM05D006046 ORTHO05D007580 3.0e-27 125.9 141 57.4
Oeu052589.3 Olea europaea HOM05D006046 ORTHO05D007580 5.1e-27 125.2 159 49.7
CBR_g88557 Chara braunii HOM05D006046 ORTHO05D007580 4.3e-26 122.1 102 57.8
PGSC0003DMG400001117 Solanum tuberosum HOM05D006046 ORTHO05D007580 1.7e-25 120.2 168 45.8
Peaxi162Scf00309g00623 Petunia axillaris HOM05D006046 ORTHO05D007580 2.2e-25 119.8 161 46.6
Solyc01g079090.4 Solanum lycopersicum HOM05D006046 ORTHO05D007580 3.7e-25 119.0 171 45.0
Sp1g01440 Schrenkiella parvula HOM05D006046 ORTHO05D007580 8.2e-25 117.9 118 58.5
CAN.G179.31 Capsicum annuum HOM05D006046 ORTHO05D007580 2.4e-24 116.3 164 45.7
TWI23G1081 Tripterygium wilfordii HOM05D006046 ORTHO05D007580 5.3e-24 115.2 104 57.7
Mapoly0001s0469 Marchantia polymorpha HOM05D006046 ORTHO05D007580 9.1e-24 114.4 150 47.3
Lj1C7T2 Lonicera japonica HOM05D006046 ORTHO05D007580 1.2e-23 114.0 172 45.3
Hma1.2p1_0408F.1_g146250 Hydrangea macrophylla HOM05D006046 ORTHO05D007580 1.0e-22 110.9 72 75.0
PRCOL_00002487 Prasinoderma coloniale HOM05D006046 ORTHO05D007580 2.1e-20 103.2 86 61.6
Cre09.g396300 Chlamydomonas reinhardtii HOM05D006046 ORTHO05D007580 1.5e-18 97.1 97 52.6
MCO14G379 Micromonas commoda HOM05D006046 ORTHO05D007580 3.3e-18 95.9 79 59.5
Glyma.02G007166 Glycine max HOM05D006046 ORTHO05D007580 2.0e-10 70.1 35 88.6
Cc07_g00620 Coffea canephora HOM05D007163 ORTHO05D009213 7.0e-08 61.6 93 40.9
Pp3c1_4180 Physcomitrium patens HOM05D007163 ORTHO05D009213 3.5e-07 59.3 80 40.0
Ah.11g045340 Amaranthus hybridus HOM05D007163 ORTHO05D009213 1.3e-06 57.4 84 39.3
BcaB08g36967 Brassica carinata HOM05D007163 ORTHO05D009213 1.3e-06 57.4 86 38.4
AagrBONN_evm.TU.Sc2ySwM_362.138 Anthoceros agrestis HOM05D007163 ORTHO05D009213 1.7e-06 57.0 68 39.7
SalBow1G0436 Salvia bowleyana HOM05D007163 ORTHO05D009213 1.7e-06 57.0 94 34.0
CAN.G1965.14 Capsicum annuum HOM05D007163 ORTHO05D009213 2.9e-06 56.2 86 37.2
EL10Ac2g03213 Beta vulgaris HOM05D007163 ORTHO05D009213 3.8e-06 55.8 87 41.4
AUR62044205 Chenopodium quinoa HOM05D006046 ORTHO05D007580 5.0e-06 55.5 43 65.1
Lsat_1_v5_gn_4_185401 Lactuca sativa HOM05D007163 ORTHO05D009213 5.0e-06 55.5 86 37.2
AL6G24890 Arabidopsis lyrata HOM05D007163 ORTHO05D009213 6.5e-06 55.1 100 34.0
C09p62940 Brassica napus HOM05D007163 ORTHO05D009213 6.5e-06 55.1 86 37.2
BcaC04g19052 Brassica carinata HOM05D007163 ORTHO05D009213 8.5e-06 54.7 86 37.2
BolC9t59131H Brassica oleracea HOM05D007163 ORTHO05D009213 8.5e-06 54.7 87 39.1
CsaV3_6G001080 Cucumis sativus L. HOM05D007163 ORTHO05D009213 8.5e-06 54.7 74 43.2
SMO165G0055 Selaginella moellendorffii HOM05D007163 ORTHO05D009213 8.5e-06 54.7 78 34.6


User provided reference genes

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