Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3468 Ceratophyllum demersum HOM05D005804 ORTHO05D006849 6.6e-218 760.4 376 100.0
TAR629G0711 Trochodendron aralioides HOM05D005804 ORTHO05D006849 1.7e-59 234.2 291 45.0
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 5.3e-58 229.2 304 45.4
GSVIVG01008547001 Vitis vinifera HOM05D005804 ORTHO05D006849 4.1e-50 203.0 322 39.1
THA.LOC104825017 Tarenaya hassleriana HOM05D005804 ORTHO05D006849 5.0e-48 196.1 299 40.1
QL10p002869 Quercus lobata HOM05D005804 ORTHO05D006849 1.5e-47 194.5 298 40.3
Dinv23150 Davidia involucrata HOM05D005804 ORTHO05D006849 7.2e-47 192.2 296 41.6
TPR.G14211 Trifolium pratense HOM05D005804 ORTHO05D006849 1.2e-46 191.4 296 38.5
CiPaw.11G006800 Carya illinoinensis HOM05D005804 ORTHO05D006849 1.6e-46 191.0 300 42.0
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla HOM05D005804 ORTHO05D006849 2.7e-46 190.3 296 39.5
Prupe.5G150700 Prunus persica HOM05D005804 ORTHO05D006849 4.7e-46 189.5 301 40.5
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea HOM05D005804 ORTHO05D006849 1.4e-45 188.0 281 41.6
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 3.0e-45 186.8 289 39.8
Psat5g051400 Pisum sativum HOM05D005804 ORTHO05D006849 4.0e-45 186.4 295 39.7
FvH4_5g08360 Fragaria vesca HOM05D005804 ORTHO05D006849 8.8e-45 185.3 289 39.8
TWI23G1188 Tripterygium wilfordii HOM05D005804 ORTHO05D006849 7.5e-44 182.2 300 37.7
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea HOM05D005804 ORTHO05D006849 1.3e-43 181.4 300 38.3
Lalb_Chr11g0069551 Lupinus albus HOM05D005804 ORTHO05D006849 1.3e-43 181.4 300 39.7
FAN08G1998 Fragaria x ananassa HOM05D005804 ORTHO05D006849 2.2e-43 180.6 293 39.6
FAN04G2797 Fragaria x ananassa HOM05D005804 ORTHO05D006849 4.8e-43 179.5 289 39.1
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea HOM05D005804 ORTHO05D006849 6.3e-43 179.1 281 38.4
Lj9A479T55 Lonicera japonica HOM05D005804 ORTHO05D006849 6.3e-43 179.1 320 35.9
Aqoxy5G03360 Aquilegia oxysepala HOM05D005804 ORTHO05D006849 8.3e-43 178.7 297 38.4
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea HOM05D005804 ORTHO05D006849 1.1e-42 178.3 264 39.8
Ca_16047_v3 Cicer arietinum L. HOM05D005804 ORTHO05D006849 1.4e-42 177.9 295 37.3
Cfa018793 Carpinus fangiana HOM05D005804 ORTHO05D006849 3.1e-42 176.8 321 37.4
Haze_07141 Corylus avellana HOM05D005804 ORTHO05D006849 3.1e-42 176.8 331 36.6
Oeu058729.2 Olea europaea HOM05D005804 ORTHO05D006849 3.1e-42 176.8 339 37.2
Rhsim12G0175100 Rhododendron simsii HOM05D005804 ORTHO05D006849 3.1e-42 176.8 332 36.1
FAN13G2030 Fragaria x ananassa HOM05D005804 ORTHO05D006849 5.4e-42 176.0 293 38.6
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 1.2e-41 174.9 288 38.5
COL.COLO4_28132 Corchorus olitorius HOM05D005804 ORTHO05D006849 1.2e-41 174.9 293 37.9
Gorai.001G058800 Gossypium raimondii HOM05D005804 ORTHO05D006849 3.5e-41 173.3 295 39.3
Nitab4.5_0001180g0250 Nicotiana tabacum HOM05D005804 ORTHO05D006849 3.5e-41 173.3 292 35.6
Peaxi162Scf00171g00421 Petunia axillaris HOM05D005804 ORTHO05D006849 5.9e-41 172.6 297 37.4
MD14G1156600 Malus domestica HOM05D005804 ORTHO05D006849 7.7e-41 172.2 290 40.7
MELO3C002363.2 Cucumis melo HOM05D005804 ORTHO05D006849 1.0e-40 171.8 307 37.1
Nitab4.5_0010950g0010 Nicotiana tabacum HOM05D005804 ORTHO05D006849 1.7e-40 171.0 287 36.9
MBI11_g05331_MAGBIO Magnolia biondii HOM05D005804 ORTHO05D006849 2.2e-40 170.6 276 40.6
Medtr3g099220 Medicago truncatula HOM05D005804 ORTHO05D006849 2.9e-40 170.2 300 37.7
Migut.O00254 Erythranthe guttata HOM05D005804 ORTHO05D006849 3.8e-40 169.9 289 36.7
Sed0001636 Sechium edule HOM05D005804 ORTHO05D006849 3.8e-40 169.9 303 36.6
Sopen03g029080 Solanum pennellii HOM05D005804 ORTHO05D006849 3.8e-40 169.9 287 36.2
Cpa.g.sc13.112 Carica papaya HOM05D005804 ORTHO05D006849 5.0e-40 169.5 293 38.2
Solyc03g098330.2 Solanum lycopersicum HOM05D005804 ORTHO05D006849 5.0e-40 169.5 287 36.2
Ciclev10031832m.g Citrus clementina HOM05D005804 ORTHO05D006849 6.5e-40 169.1 260 40.0
PGSC0003DMG400025629 Solanum tuberosum HOM05D005804 ORTHO05D006849 6.5e-40 169.1 287 34.8
Atru.chr6.1796 Acer truncatum HOM05D005804 ORTHO05D006849 8.5e-40 168.7 280 38.6
CsaV3_1G009670 Cucumis sativus L. HOM05D005804 ORTHO05D006849 8.5e-40 168.7 303 36.3
Hund02443 Selenicereus undatus HOM05D005804 ORTHO05D006849 1.5e-39 167.9 295 36.6
AT4G24900 Arabidopsis thaliana HOM05D005804 ORTHO05D006849 2.5e-39 167.2 296 39.2
Medtr2g045240 Medicago truncatula HOM05D005804 ORTHO05D006849 2.5e-39 167.2 300 37.3
Medtr2g045245 Medicago truncatula HOM05D005804 ORTHO05D006849 2.5e-39 167.2 300 37.3
ClCG03G003790 Citrullus lanatus HOM05D005804 ORTHO05D006849 3.2e-39 166.8 316 36.1
SGA_v2.0_scaffold164G38120 Striga asiatica HOM05D005804 ORTHO05D006849 3.2e-39 166.8 323 34.4
Atru.chr12.1219 Acer truncatum HOM05D005804 ORTHO05D006849 5.5e-39 166.0 281 39.1
Eucgr.K02724 Eucalyptus grandis HOM05D005804 ORTHO05D006849 7.2e-39 165.6 290 36.6
HanXRQChr13g0408711 Helianthus annuus HOM05D005804 ORTHO05D006849 9.4e-39 165.2 283 38.5
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 1.0e-37 161.8 237 42.6
Lj1g0008882 Lotus japonicus HOM05D005804 ORTHO05D006849 1.4e-37 161.4 303 35.6
Sp7g22880 Schrenkiella parvula HOM05D005804 ORTHO05D006849 1.4e-37 161.4 265 37.7
CDE02G0232 Ceratophyllum demersum HOM05D039851 ORTHO05D006849 4.0e-37 159.8 122 73.8
SalBow8G2935 Salvia bowleyana HOM05D005804 ORTHO05D006849 6.8e-37 159.1 288 36.8
SHI10578 Sapria himalayana HOM05D005804 ORTHO05D006849 6.8e-37 159.1 270 39.6
Lsat_1_v5_gn_1_33221 Lactuca sativa HOM05D005804 ORTHO05D006849 8.8e-37 158.7 267 40.8
AL7G28300 Arabidopsis lyrata HOM05D005804 ORTHO05D006849 1.2e-36 158.3 293 38.2
Sc22g0003840 Simmondsia chinensis HOM05D005804 ORTHO05D006849 4.4e-36 156.4 304 36.5
Thecc.03G129500 Theobroma cacao HOM05D005804 ORTHO05D006849 9.8e-36 155.2 295 35.6
PSO478G1623 Papaver somniferum HOM05D005804 ORTHO05D006849 2.2e-35 154.1 300 34.0
Duzib205G0351 Durio zibethinus HOM05D005804 ORTHO05D006849 2.8e-35 153.7 303 34.7
Lalb_Chr08g0237201 Lupinus albus HOM05D005804 ORTHO05D006849 2.8e-35 153.7 126 58.7
DCAR_007491 Daucus carota HOM05D005804 ORTHO05D006849 4.9e-35 152.9 280 33.9
Thhalv10025155m.g Eutrema salsugineum HOM05D005804 ORTHO05D006849 4.9e-35 152.9 298 35.2
Manes.14G051001 Manihot esculenta HOM05D005804 ORTHO05D006849 4.9e-35 152.9 126 60.3
Cc04_g08810 Coffea canephora HOM05D005804 ORTHO05D006849 1.1e-34 151.8 304 34.9
Gohir.A07G051066 Gossypium hirsutum HOM05D005804 ORTHO05D006849 1.8e-34 151.0 126 58.7
Gohir.D07G055466 Gossypium hirsutum HOM05D005804 ORTHO05D006849 1.8e-34 151.0 126 59.5
ECA247G1629 Erigeron canadensis HOM05D005804 ORTHO05D006849 2.4e-34 150.6 285 38.2
HPP92_013611 Vanilla planifolia HOM05D005804 ORTHO05D006849 2.0e-33 147.5 126 56.3
ATR0178G002 Amborella trichopoda HOM05D005804 ORTHO05D006849 5.9e-33 146.0 287 35.9
CSS0012660 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 5.9e-33 146.0 127 55.1
Zm00001eb102430 Zea mays HOM05D005804 ORTHO05D006849 7.7e-33 145.6 297 36.0
Medtr2g045235 Medicago truncatula HOM05D005804 ORTHO05D006849 2.3e-32 144.1 126 54.8
CARHR232300 Cardamine hirsuta HOM05D005804 ORTHO05D006849 2.9e-32 143.7 128 56.2
Aa31LG7G10880 Aethionema arabicum HOM05D005804 ORTHO05D006849 1.1e-31 141.7 295 33.9
AUR62029607 Chenopodium quinoa HOM05D005804 ORTHO05D006849 1.5e-31 141.4 299 33.8
Carub.0007s1616 Capsella rubella HOM05D005804 ORTHO05D006849 1.9e-31 141.0 133 56.4
RcHm_v2.0_Chr7g0190081 Rosa chinensis HOM05D005804 ORTHO05D006849 7.3e-31 139.0 131 53.4
VMungo1309G0122 Vigna mungo HOM05D005804 ORTHO05D006849 4.7e-30 136.3 295 33.6
BcaNung06008 Brassica carinata HOM05D005804 ORTHO05D006849 4.0e-29 133.3 278 34.9
BraA01t01555Z Brassica rapa HOM05D005804 ORTHO05D006849 5.2e-29 132.9 278 34.9
A01p16190 Brassica napus HOM05D005804 ORTHO05D006849 2.0e-28 131.0 278 34.9
Ah.02g114880 Amaranthus hybridus HOM05D005804 ORTHO05D006849 3.4e-28 130.2 292 32.2
unitig_26.g9610 Utricularia gibba HOM05D005804 ORTHO05D006849 5.7e-28 129.4 294 33.7
BolC1t01947H Brassica oleracea HOM05D005804 ORTHO05D006849 6.4e-27 125.9 144 48.6
EL10Ac5g11407 Beta vulgaris HOM05D005804 ORTHO05D006849 2.4e-26 124.0 126 48.4
vmacro16720 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 3.2e-26 123.6 125 50.4
Glyma.06G170000 Glycine max HOM05D005804 ORTHO05D006849 7.0e-26 122.5 153 43.8
BcaC09g52237 Brassica carinata HOM05D005804 ORTHO05D006849 1.2e-25 121.7 144 47.9
C01p20180 Brassica napus HOM05D005804 ORTHO05D006849 2.0e-25 120.9 144 47.2
MD06G1141400 Malus domestica HOM05D005804 ORTHO05D006849 7.8e-25 119.0 260 36.2
SEGI_03962 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 6.6e-24 115.9 328 29.3
SEGI_29979 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 6.6e-24 115.9 320 28.8
AagrBONN_evm.TU.Sc2ySwM_362.247 Anthoceros agrestis HOM05D005804 ORTHO05D006849 7.3e-23 112.5 130 47.7
Zm00001eb317740 Zea mays HOM05D005804 ORTHO05D006849 5.8e-20 102.8 100 57.0
Dinv11175 Davidia involucrata HOM05D005804 ORTHO05D006849 6.4e-19 99.4 115 47.8
CDE02G2707 Ceratophyllum demersum HOM05D039851 ORTHO05D006849 4.1e-18 96.7 62 82.3
Mapoly0096s0043 Marchantia polymorpha HOM05D005804 ORTHO05D006849 5.4e-18 96.3 137 41.6
Pp3c6_21480 Physcomitrium patens HOM05D005804 ORTHO05D006849 1.2e-17 95.1 143 38.5
Dinv11177 Davidia involucrata HOM05D005804 ORTHO05D006849 5.0e-16 89.7 225 31.1
CSS0001147 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 1.5e-15 88.2 85 49.4
SMO133G0032 Selaginella moellendorffii HOM05D005804 ORTHO05D006849 1.9e-15 87.8 197 32.0
CBR_g12751 Chara braunii HOM05D005804 ORTHO05D006849 7.3e-15 85.9 227 31.3
CSS0025658 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 8.1e-14 82.4 131 38.2
Potri.015G096700 Populus trichocarpa HOM05D005804 ORTHO05D006849 1.1e-13 82.0 131 38.9
Actinidia08874 Actinidia chinensis HOM05D005804 ORTHO05D006849 1.3e-11 75.1 143 35.7
Oeu016044.4 Olea europaea HOM05D005804 ORTHO05D006849 9.2e-10 68.9 86 41.9
vmacro16719 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 2.1e-09 67.8 85 42.4
CDE02G1064 Ceratophyllum demersum HOM05D039851 ORTHO05D006849 1.1e-07 62.0 41 75.6
CiPaw.12G043400 Carya illinoinensis HOM05D005804 ORTHO05D006849 7.3e-07 59.3 77 44.2
Potri.012G098000 Populus trichocarpa HOM05D005804 ORTHO05D006849 1.6e-06 58.2 128 32.8


User provided reference genes

Program Settings