Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3459 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 4.1e-78 294.7 149 100.0
CDE05G1751 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 1.2e-53 213.4 133 82.0
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 7.1e-22 107.8 114 50.0
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 9.0e-17 90.9 121 41.3
MBI18_g22612_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 4.5e-16 88.6 112 45.5
TAR624G1270 Trochodendron aralioides HOM05D003074 ORTHO05D002434 5.8e-16 88.2 117 42.7
Dinv40751 Davidia involucrata HOM05D003074 ORTHO05D002434 1.4e-14 83.6 124 37.1
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 4.2e-14 82.0 131 36.6
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 5.4e-14 81.6 114 41.2
Nn1g03544 Nelumbo nucifera HOM05D003074 ORTHO05D002434 1.2e-13 80.5 114 36.8
Duzib213G0915 Durio zibethinus HOM05D003074 ORTHO05D002434 1.6e-13 80.1 123 35.8
Prupe.4G212400 Prunus persica HOM05D003074 ORTHO05D002434 3.5e-13 79.0 123 36.6
Nn5g29371 Nelumbo nucifera HOM05D003074 ORTHO05D002434 4.6e-13 78.6 120 42.5
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 7.9e-13 77.8 122 38.5
PSO541G1700 Papaver somniferum HOM05D003074 ORTHO05D002434 7.9e-13 77.8 124 39.5
PSO675G3145 Papaver somniferum HOM05D003074 ORTHO05D002434 1.0e-12 77.4 124 39.5
Duzib268G1655 Durio zibethinus HOM05D003074 ORTHO05D002434 2.3e-12 76.3 122 33.6
ATR0752G060 Amborella trichopoda HOM05D003074 ORTHO05D002434 6.7e-12 74.7 114 39.5
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 6.7e-12 74.7 122 37.7
PGSC0003DMG400001089 Solanum tuberosum HOM05D003074 ORTHO05D002434 6.7e-12 74.7 118 34.7
Haze_09674 Corylus avellana HOM05D003074 ORTHO05D002434 8.7e-12 74.3 120 32.5
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 1.1e-11 73.9 131 32.8
Peaxi162Scf01097g00039 Petunia axillaris HOM05D003074 ORTHO05D002434 1.5e-11 73.6 114 34.2
PGSC0003DMG400029820 Solanum tuberosum HOM05D003074 ORTHO05D002434 1.5e-11 73.6 58 55.2
Oeu007582.1 Olea europaea HOM05D003074 ORTHO05D002434 1.9e-11 73.2 111 36.9
Sed0007461 Sechium edule HOM05D003074 ORTHO05D002434 1.9e-11 73.2 116 37.1
Cpa.g.sc97.7 Carica papaya HOM05D003074 ORTHO05D002434 2.5e-11 72.8 113 36.3
Oeu042936.1 Olea europaea HOM05D003074 ORTHO05D002434 2.5e-11 72.8 111 35.1
Ciclev10009680m.g Citrus clementina HOM05D003074 ORTHO05D002434 4.3e-11 72.0 134 34.3
Cfa020350 Carpinus fangiana HOM05D003074 ORTHO05D002434 7.4e-11 71.2 118 32.2
FvH4_3g22640 Fragaria vesca HOM05D003074 ORTHO05D002434 7.4e-11 71.2 141 35.5
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 7.4e-11 71.2 124 30.6
MSTRG.6917 Avicennia marina HOM05D003074 ORTHO05D002434 9.6e-11 70.9 119 34.5
Ca_01715_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 9.6e-11 70.9 118 38.1
Ca_30684_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 9.6e-11 70.9 118 38.1
Aqoxy1G02176 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 1.3e-10 70.5 118 39.0
FAN11G2929 Fragaria x ananassa HOM05D003074 ORTHO05D002434 1.3e-10 70.5 141 35.5
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.3e-10 70.5 120 32.5
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 1.3e-10 70.5 120 32.5
MBI02_g40709_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 1.3e-10 70.5 125 35.2
Sabra04G0008200 Salix brachista HOM05D003074 ORTHO05D002434 1.3e-10 70.5 127 36.2
CiPaw.12G129500 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.6e-10 70.1 131 35.9
FAN16G0504 Fragaria x ananassa HOM05D003074 ORTHO05D002434 1.6e-10 70.1 141 35.5
FAN25G2410 Fragaria x ananassa HOM05D003074 ORTHO05D002434 1.6e-10 70.1 141 35.5
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.6e-10 70.1 120 32.5
Aqoxy1G02174 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 2.1e-10 69.7 126 35.7
Lsat_1_v5_gn_9_93960 Lactuca sativa HOM05D003074 ORTHO05D002434 2.1e-10 69.7 117 35.0
Sed0026688 Sechium edule HOM05D003074 ORTHO05D002434 2.1e-10 69.7 117 36.8
PGSC0003DMG400032292 Solanum tuberosum HOM05D003074 ORTHO05D002434 2.1e-10 69.7 85 49.4
Aqoxy1G02178 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 2.8e-10 69.3 114 37.7
ClCG05G014310 Citrullus lanatus HOM05D003074 ORTHO05D002434 3.7e-10 68.9 116 36.2
Gorai.002G088300 Gossypium raimondii HOM05D003074 ORTHO05D002434 4.8e-10 68.6 120 35.0
Manes.16G007700 Manihot esculenta HOM05D003074 ORTHO05D002434 6.2e-10 68.2 126 37.3
CARHR095990 Cardamine hirsuta HOM05D003074 ORTHO05D002434 8.1e-10 67.8 118 37.3
Dinv22264 Davidia involucrata HOM05D003074 ORTHO05D002434 8.1e-10 67.8 117 35.0
Duzib235G0239 Durio zibethinus HOM05D003074 ORTHO05D002434 8.1e-10 67.8 116 34.5
Ah.04g165880 Amaranthus hybridus HOM05D003074 ORTHO05D002434 1.1e-09 67.4 116 38.8
ClCG03G004770 Citrullus lanatus HOM05D003074 ORTHO05D002434 1.1e-09 67.4 116 40.5
MBI02_g07158_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 1.1e-09 67.4 73 41.1
Medtr3g051530 Medicago truncatula HOM05D003074 ORTHO05D002434 1.1e-09 67.4 116 35.3
Medtr3g051610 Medicago truncatula HOM05D003074 ORTHO05D002434 1.1e-09 67.4 114 34.2
PGSC0003DMG400031876 Solanum tuberosum HOM05D003074 ORTHO05D002434 1.1e-09 67.4 80 50.0
TPR.G16595 Trifolium pratense HOM05D003074 ORTHO05D002434 1.1e-09 67.4 117 35.0
EL10Ac4g07810 Beta vulgaris HOM05D003074 ORTHO05D002434 1.4e-09 67.0 116 36.2
Cc09_g09730 Coffea canephora HOM05D003074 ORTHO05D002434 1.8e-09 66.6 133 33.1
FAN21G2959 Fragaria x ananassa HOM05D003074 ORTHO05D002434 1.8e-09 66.6 142 34.5
EL10Ac4g07811 Beta vulgaris HOM05D003074 ORTHO05D002434 2.4e-09 66.2 120 33.3
Thhalv10021814m.g Eutrema salsugineum HOM05D003074 ORTHO05D002434 2.4e-09 66.2 112 33.0
Aqoxy1G02175 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 3.1e-09 65.9 130 30.0
Eucgr.E04063 Eucalyptus grandis HOM05D003074 ORTHO05D002434 3.1e-09 65.9 121 33.9
Manes.03G129100 Manihot esculenta HOM05D003074 ORTHO05D002434 3.1e-09 65.9 121 35.5
Potri.004G015900 Populus trichocarpa HOM05D003074 ORTHO05D002434 3.1e-09 65.9 132 34.8
CiPaw.11G189000 Carya illinoinensis HOM05D003074 ORTHO05D002434 4.0e-09 65.5 136 31.6
Migut.M01767 Erythranthe guttata HOM05D003074 ORTHO05D002434 4.0e-09 65.5 124 30.6
Gohir.A01G079300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 4.0e-09 65.5 120 34.2
Manes.15G072100 Manihot esculenta HOM05D003074 ORTHO05D002434 4.0e-09 65.5 120 34.2
Medtr3g051570 Medicago truncatula HOM05D003074 ORTHO05D002434 4.0e-09 65.5 118 34.7
Manes.17G038600 Manihot esculenta HOM05D003074 ORTHO05D002434 5.3e-09 65.1 125 35.2
Aqoxy1G02177 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 9.0e-09 64.3 116 35.3
CiPaw.09G091000 Carya illinoinensis HOM05D003074 ORTHO05D002434 9.0e-09 64.3 132 36.4
PGR031G1144 Punica granatum HOM05D003074 ORTHO05D002434 9.0e-09 64.3 114 31.6
TWI38G1232 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 9.0e-09 64.3 129 36.4
Cfa000232 Carpinus fangiana HOM05D003074 ORTHO05D002434 1.2e-08 63.9 127 37.0
Lalb_Chr15g0087561 Lupinus albus HOM05D008677 ORTHO05D002434 1.2e-08 63.9 120 38.3
MD11G1218800 Malus domestica HOM05D003074 ORTHO05D002434 1.2e-08 63.9 128 31.2
Sed0010919 Sechium edule HOM05D003074 ORTHO05D002434 1.2e-08 63.9 117 36.8
PGR004G0474 Punica granatum HOM05D003074 ORTHO05D002434 1.5e-08 63.5 134 32.8
QL05p073377 Quercus lobata HOM05D003074 ORTHO05D002434 1.5e-08 63.5 127 38.6
Medtr3g051510 Medicago truncatula HOM05D003074 ORTHO05D002434 2.0e-08 63.2 114 34.2
Potri.011G003100 Populus trichocarpa HOM05D003074 ORTHO05D002434 2.0e-08 63.2 132 33.3
THA.LOC104817856 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 2.0e-08 63.2 123 31.7
Atru.chr2.3399 Acer truncatum HOM05D003074 ORTHO05D002434 2.6e-08 62.8 141 32.6
Eucgr.E04064 Eucalyptus grandis HOM05D003074 ORTHO05D002434 2.6e-08 62.8 123 33.3
Phvul.006G150100 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 2.6e-08 62.8 129 33.3
Atru.chr2.3400 Acer truncatum HOM05D003074 ORTHO05D002434 4.5e-08 62.0 144 32.6
Haze_06793 Corylus avellana HOM05D003074 ORTHO05D002434 4.5e-08 62.0 127 34.6
Hma1.2p1_1091F.1_g255850 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 4.5e-08 62.0 122 32.8
Actinidia35342 Actinidia chinensis HOM05D003074 ORTHO05D002434 5.8e-08 61.6 101 38.6
CsaV3_1G010810 Cucumis sativus L. HOM05D003074 ORTHO05D002434 5.8e-08 61.6 109 37.6
Hma1.2p1_1162F.1_g262580 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 9.9e-08 60.8 121 32.2
Aa31LG8G7150 Aethionema arabicum HOM05D010457 ORTHO05D002434 1.3e-07 60.5 117 36.8
Eucgr.E04062 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.3e-07 60.5 132 31.8
TWI38G1886 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 1.3e-07 60.5 118 32.2
Eucgr.F03465 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.7e-07 60.1 131 34.4
AUR62020442 Chenopodium quinoa HOM05D003074 ORTHO05D002434 2.2e-07 59.7 122 33.6
LjContig00272g0022666 Lotus japonicus HOM05D003074 ORTHO05D002434 2.2e-07 59.7 112 34.8
Thecc.06G219600 Theobroma cacao HOM05D003074 ORTHO05D002434 2.2e-07 59.7 122 35.2
Cc05_g13710 Coffea canephora HOM05D003074 ORTHO05D002434 2.9e-07 59.3 136 31.6
Phvul.006G043100 Phaseolus vulgaris HOM05D003074 ORTHO05D002434 2.9e-07 59.3 115 34.8
RhsimUnG0250800 Rhododendron simsii HOM05D003074 ORTHO05D002434 2.9e-07 59.3 111 33.3
A05p28590 Brassica napus HOM05D010457 ORTHO05D002434 3.8e-07 58.9 120 35.0
BcaC05g28318 Brassica carinata HOM05D010457 ORTHO05D002434 4.9e-07 58.5 118 34.7
C05p44000 Brassica napus HOM05D010457 ORTHO05D002434 4.9e-07 58.5 118 34.7
BolC5t33118H Brassica oleracea HOM05D010457 ORTHO05D002434 4.9e-07 58.5 118 34.7
CANSAT56G1803 Cannabis sativa HOM05D003074 ORTHO05D002434 4.9e-07 58.5 145 32.4
AUR62015774 Chenopodium quinoa HOM05D003074 ORTHO05D002434 4.9e-07 58.5 116 33.6
AUR62020443 Chenopodium quinoa HOM05D003074 ORTHO05D002434 4.9e-07 58.5 114 28.9
Duzib192G0001 Durio zibethinus HOM05D003074 ORTHO05D002434 4.9e-07 58.5 116 33.6
Psat1g181240 Pisum sativum HOM05D008677 ORTHO05D002434 4.9e-07 58.5 132 34.1
unitig_85.g27325 Utricularia gibba HOM05D003074 ORTHO05D002434 4.9e-07 58.5 115 33.0
DCAR_022560 Daucus carota HOM05D003074 ORTHO05D002434 6.4e-07 58.2 127 29.9
Nitab4.5_0009995g0010 Nicotiana tabacum HOM05D003074 ORTHO05D002434 6.4e-07 58.2 106 31.1
BraA05t21736Z Brassica rapa HOM05D010457 ORTHO05D002434 8.4e-07 57.8 117 32.5
Eucgr.E04066 Eucalyptus grandis HOM05D003074 ORTHO05D002434 8.4e-07 57.8 120 33.3
Sc03g0008600 Simmondsia chinensis HOM05D003074 ORTHO05D002434 8.4e-07 57.8 116 31.9
AUR62020444 Chenopodium quinoa HOM05D003074 ORTHO05D002434 1.1e-06 57.4 116 33.6
Glyma.18G096700 Glycine max HOM05D003074 ORTHO05D002434 1.1e-06 57.4 115 35.7
Sc16g0006080 Simmondsia chinensis HOM05D003074 ORTHO05D002434 1.1e-06 57.4 115 33.9
TAR624G0488 Trochodendron aralioides HOM05D003074 ORTHO05D002434 1.1e-06 57.4 109 33.9
vmacro03644 Vaccinium macrocarpon HOM05D003074 ORTHO05D002434 1.1e-06 57.4 117 34.2
VMungo1215G0276 Vigna mungo HOM05D008677 ORTHO05D002434 1.1e-06 57.4 118 32.2
Eucgr.E04060 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.4e-06 57.0 124 32.3
BcaB06g26099 Brassica carinata HOM05D010457 ORTHO05D002434 1.9e-06 56.6 123 36.6
MELO3C002460.2 Cucumis melo HOM05D003074 ORTHO05D002434 1.9e-06 56.6 115 33.0
Eucgr.D01318 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.9e-06 56.6 121 33.9
Eucgr.E04061 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.9e-06 56.6 121 32.2
ECA246G0494 Erigeron canadensis HOM05D003074 ORTHO05D002434 3.2e-06 55.8 112 29.5
Glyma.08G316000 Glycine max HOM05D003074 ORTHO05D002434 3.2e-06 55.8 121 32.2
ECA240G4169 Erigeron canadensis HOM05D003074 ORTHO05D002434 4.2e-06 55.5 69 36.2
Lalb_Chr18g0056321 Lupinus albus HOM05D008677 ORTHO05D002434 4.2e-06 55.5 126 35.7
Eucgr.E04065 Eucalyptus grandis HOM05D003074 ORTHO05D002434 5.5e-06 55.1 126 31.7
Sc17g0007340 Simmondsia chinensis HOM05D003074 ORTHO05D002434 7.1e-06 54.7 121 35.5
Glyma.17G014200 Glycine max HOM05D008677 ORTHO05D002434 9.3e-06 54.3 127 31.5
Oeu063916.1 Olea europaea HOM05D003074 ORTHO05D002434 9.3e-06 54.3 119 36.1


User provided reference genes

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