Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3450 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 3.5e-203 711.4 369 100.0
CDE11G0900 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 1.7e-112 410.2 294 79.6
CDE05G3316 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 4.7e-51 206.1 389 39.6
TAR624G0676 Trochodendron aralioides HOM05D005213 ORTHO05D006229 7.1e-47 192.2 385 40.5
MBI19_g18107_MAGBIO Magnolia biondii HOM05D004195 ORTHO05D005309 4.9e-40 169.5 419 35.3
Ciclev10008490m.g Citrus clementina HOM05D005213 ORTHO05D006229 5.4e-39 166.0 413 37.5
Migut.A00332 Erythranthe guttata HOM05D005213 ORTHO05D006229 3.5e-38 163.3 419 35.8
Nn8g38551 Nelumbo nucifera HOM05D005213 ORTHO05D006229 3.5e-38 163.3 414 36.2
Hund02523 Selenicereus undatus HOM05D005213 ORTHO05D006229 4.6e-38 162.9 342 39.8
TWI34G0479 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 6.0e-38 162.5 393 36.4
Gohir.D06G080700 Gossypium hirsutum HOM05D005213 ORTHO05D006229 7.8e-38 162.2 382 36.4
Gorai.010G094100 Gossypium raimondii HOM05D005213 ORTHO05D006229 1.3e-37 161.4 382 36.4
Glyma.04G057900 Glycine max HOM05D005213 ORTHO05D006229 2.3e-37 160.6 425 36.5
Prupe.1G401300 Prunus persica HOM05D005213 ORTHO05D006229 2.3e-37 160.6 418 34.4
Potri.006G217900 Populus trichocarpa HOM05D005213 ORTHO05D006229 3.0e-37 160.2 420 33.8
Gorai.009G039700 Gossypium raimondii HOM05D005213 ORTHO05D006229 2.5e-36 157.1 412 33.5
Gohir.D05G039200 Gossypium hirsutum HOM05D005213 ORTHO05D006229 3.3e-36 156.8 410 33.7
CiPaw.16G068600 Carya illinoinensis HOM05D005213 ORTHO05D006229 2.1e-35 154.1 418 33.0
MD15G1047100 Malus domestica HOM05D005213 ORTHO05D006229 1.1e-34 151.8 415 34.5
Gohir.A06G081000 Gossypium hirsutum HOM05D005213 ORTHO05D006229 5.3e-34 149.4 382 35.3
Manes.03G055700 Manihot esculenta HOM05D005213 ORTHO05D006229 9.0e-34 148.7 338 39.3
Duzib187G1454 Durio zibethinus HOM05D005213 ORTHO05D006229 2.0e-33 147.5 401 32.9
Dinv41845 Davidia involucrata HOM05D005213 ORTHO05D006229 4.5e-33 146.4 443 32.7
Cfa023359 Carpinus fangiana HOM05D005213 ORTHO05D006229 1.3e-32 144.8 415 32.8
Cc08_g07800 Coffea canephora HOM05D005213 ORTHO05D006229 1.3e-32 144.8 430 33.7
Peaxi162Scf00922g00016 Petunia axillaris HOM05D005213 ORTHO05D006229 1.3e-32 144.8 409 35.5
RcHm_v2.0_Chr6g0304741 Rosa chinensis HOM05D005213 ORTHO05D006229 1.7e-32 144.4 419 36.3
Thecc.09G066400 Theobroma cacao HOM05D005213 ORTHO05D006229 1.7e-32 144.4 412 34.0
Cpa.g.sc82.19 Carica papaya HOM05D005213 ORTHO05D006229 2.2e-32 144.1 401 35.7
Lj1g0011388 Lotus japonicus HOM05D005213 ORTHO05D006229 2.2e-32 144.1 395 35.9
Aqoxy7G04081 Aquilegia oxysepala HOM05D005213 ORTHO05D006229 3.8e-32 143.3 426 32.6
Manes.16G087800 Manihot esculenta HOM05D005213 ORTHO05D006229 4.9e-32 142.9 410 34.4
Duzib168G1397 Durio zibethinus HOM05D005213 ORTHO05D006229 8.4e-32 142.1 371 35.3
MD08G1046900 Malus domestica HOM05D005213 ORTHO05D006229 1.1e-31 141.7 423 34.3
DCAR_001248 Daucus carota HOM05D005213 ORTHO05D006229 1.4e-31 141.4 390 34.6
Medtr3g105580 Medicago truncatula HOM05D005213 ORTHO05D006229 1.9e-31 141.0 354 35.9
Oeu020105.1 Olea europaea HOM05D005213 ORTHO05D006229 1.9e-31 141.0 363 34.2
Glyma.06G058600 Glycine max HOM05D005213 ORTHO05D006229 2.4e-31 140.6 416 34.1
SGA_v2.0_scaffold22G09922 Striga asiatica HOM05D005213 ORTHO05D006229 7.1e-31 139.0 367 35.4
EL10Ac5g11257 Beta vulgaris HOM05D005213 ORTHO05D006229 3.5e-30 136.7 389 33.9
Ca_15799_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 3.5e-30 136.7 422 33.4
Duzib150G1003 Durio zibethinus HOM05D005213 ORTHO05D006229 3.5e-30 136.7 369 33.9
Haze_13552 Corylus avellana HOM05D005213 ORTHO05D006229 4.6e-30 136.3 419 32.5
Lalb_Chr11g0063421 Lupinus albus HOM05D005213 ORTHO05D006229 1.3e-29 134.8 359 35.4
FvH4_2g37040 Fragaria vesca HOM05D005213 ORTHO05D006229 5.1e-29 132.9 425 34.1
TPR.G21422 Trifolium pratense HOM05D005213 ORTHO05D006229 6.7e-29 132.5 395 35.4
COL.COLO4_21169 Corchorus olitorius HOM05D005213 ORTHO05D006229 1.9e-28 131.0 432 31.9
FAN20G0215 Fragaria x ananassa HOM05D005213 ORTHO05D006229 1.9e-28 131.0 413 33.9
FAN27G3126 Fragaria x ananassa HOM05D005213 ORTHO05D006229 3.3e-28 130.2 413 32.2
FAN15G1397 Fragaria x ananassa HOM05D005213 ORTHO05D006229 9.6e-28 128.6 423 32.4
Nitab4.5_0000508g0090 Nicotiana tabacum HOM05D005213 ORTHO05D006229 2.8e-27 127.1 353 35.1
CAN.G1059.3 Capsicum annuum HOM05D005213 ORTHO05D006229 3.7e-27 126.7 397 33.2
HanXRQChr08g0228011 Helianthus annuus HOM05D005213 ORTHO05D006229 6.2e-27 125.9 365 32.6
Phvul.009G084600 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 8.1e-27 125.6 405 32.6
Eucgr.C00749 Eucalyptus grandis HOM05D005213 ORTHO05D006229 1.1e-26 125.2 411 32.8
VMungo1309G2063 Vigna mungo HOM05D005213 ORTHO05D006229 1.1e-26 125.2 395 33.9
Lj7P206T8 Lonicera japonica HOM05D005213 ORTHO05D006229 3.1e-26 123.6 280 36.8
ATR0681G043 Amborella trichopoda HOM05D005213 ORTHO05D006229 1.5e-25 121.3 428 32.2
TWI32G0481 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 3.4e-25 120.2 388 32.7
Rhsim04G0156600 Rhododendron simsii HOM05D005213 ORTHO05D006229 3.8e-24 116.7 432 31.7
Nitab4.5_0007212g0010 Nicotiana tabacum HOM05D005213 ORTHO05D006229 4.9e-24 116.3 361 33.2
Psat5g033280 Pisum sativum HOM05D005213 ORTHO05D006229 6.5e-24 115.9 382 31.2
PSO386G0069 Papaver somniferum HOM05D005213 ORTHO05D006229 1.9e-23 114.4 460 30.2
PGR142G1942 Punica granatum HOM05D005213 ORTHO05D006229 5.5e-23 112.8 397 31.7
Sc10g0009530 Simmondsia chinensis HOM05D005213 ORTHO05D006229 5.5e-23 112.8 369 32.5
ECA240G0440 Erigeron canadensis HOM05D005213 ORTHO05D006229 1.2e-22 111.7 391 29.7
TPR.G38861 Trifolium pratense HOM05D005213 ORTHO05D006229 1.2e-22 111.7 339 33.3
HanXRQChr03g0067421 Helianthus annuus HOM05D005213 ORTHO05D006229 3.5e-22 110.2 371 31.0
ECA234G4818 Erigeron canadensis HOM05D005213 ORTHO05D006229 7.9e-22 109.0 334 33.8
GSVIVG01035506001 Vitis vinifera HOM05D005213 ORTHO05D006229 1.3e-21 108.2 369 31.2
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 1.8e-21 107.8 264 35.6
ClCG08G009670 Citrullus lanatus HOM05D005213 ORTHO05D006229 3.0e-21 107.1 384 29.9
Cfa017841 Carpinus fangiana HOM05D005213 ORTHO05D006229 1.1e-20 105.1 340 31.5
AUR62032196 Chenopodium quinoa HOM05D005213 ORTHO05D006229 3.3e-20 103.6 379 31.9
Haze_18367 Corylus avellana HOM05D005213 ORTHO05D006229 3.3e-20 103.6 367 32.2
Medtr1g014750 Medicago truncatula HOM05D005213 ORTHO05D006229 3.3e-20 103.6 343 32.7
CsaV3_6G031800 Cucumis sativus L. HOM05D005213 ORTHO05D006229 5.7e-20 102.8 367 30.2
Nn6g35650 Nelumbo nucifera HOM05D005213 ORTHO05D006229 5.7e-20 102.8 402 31.3
Lalb_Chr22g0349651 Lupinus albus HOM05D005213 ORTHO05D006229 1.3e-19 101.7 354 31.6
Oeu022129.1 Olea europaea HOM05D005213 ORTHO05D006229 2.8e-19 100.5 291 33.3
CSS0041342 Camellia sinensis var. sinensis HOM05D005213 ORTHO05D006229 4.8e-19 99.8 315 33.3
PSO223G0037 Papaver somniferum HOM05D005213 ORTHO05D006229 2.4e-18 97.4 435 29.4
Sed0001538 Sechium edule HOM05D005213 ORTHO05D006229 4.5e-17 93.2 330 30.0
MELO3C026560.2 Cucumis melo HOM05D005213 ORTHO05D006229 1.0e-16 92.0 273 33.0
Zm00001eb019450 Zea mays HOM05D005213 ORTHO05D006229 1.3e-16 91.7 342 30.1
THA.LOC104810950 Tarenaya hassleriana HOM05D005213 ORTHO05D006229 1.9e-15 87.8 363 28.1
Hma1.2p1_0920F.1_g236590 Hydrangea macrophylla HOM05D005213 ORTHO05D006229 5.5e-15 86.3 363 29.2
MSTRG.11768 Avicennia marina HOM05D005213 ORTHO05D006229 7.1e-15 85.9 296 29.7
Aa31LG1G13440 Aethionema arabicum HOM05D005213 ORTHO05D006229 1.6e-14 84.7 184 39.1
AUR62036963 Chenopodium quinoa HOM05D005213 ORTHO05D006229 1.6e-14 84.7 376 27.1
Solyc08g067270.3 Solanum lycopersicum HOM05D005213 ORTHO05D006229 2.1e-14 84.3 226 34.1
HanXRQChr10g0309951 Helianthus annuus HOM05D005213 ORTHO05D006229 3.5e-14 83.6 314 30.6
CANSAT25G2504 Cannabis sativa HOM05D005213 ORTHO05D006229 1.0e-13 82.0 316 28.2
SalBow8G0306 Salvia bowleyana HOM05D005213 ORTHO05D006229 3.0e-13 80.5 190 37.4
unitig_32.g10930 Utricularia gibba HOM05D005213 ORTHO05D006229 1.5e-12 78.2 242 31.0
Psat6g023400 Pisum sativum HOM05D005213 ORTHO05D006229 1.9e-12 77.8 312 30.4
Ca_13089_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 2.5e-12 77.4 265 31.3
Actinidia27819 Actinidia chinensis HOM05D005213 ORTHO05D006229 7.4e-12 75.9 123 47.2
Phvul.001G044200 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 1.3e-11 75.1 273 31.5
vmacro08659 Vaccinium macrocarpon HOM05D005213 ORTHO05D006229 1.6e-11 74.7 316 31.0
BraA03t10361Z Brassica rapa HOM05D005213 ORTHO05D006229 1.4e-10 71.6 239 33.5
Sp6g23210 Schrenkiella parvula HOM05D005213 ORTHO05D006229 1.8e-10 71.2 92 53.3
Atru.chr7.1814 Acer truncatum HOM05D005213 ORTHO05D006229 4.1e-10 70.1 110 45.5
C03p12080 Brassica napus HOM05D005213 ORTHO05D006229 4.5e-09 66.6 310 29.7
AL6G32940 Arabidopsis lyrata HOM05D005213 ORTHO05D006229 5.9e-09 66.2 181 34.8
Phvul.001G044300 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 7.7e-09 65.9 192 36.5
BcaC01g06616 Brassica carinata HOM05D005213 ORTHO05D006229 1.0e-08 65.5 310 29.4
BolC3t13679H Brassica oleracea HOM05D005213 ORTHO05D006229 1.0e-08 65.5 310 29.4
Carub.0006s1962 Capsella rubella HOM05D005213 ORTHO05D006229 1.0e-08 65.5 98 46.9
Oeu030214.1 Olea europaea HOM05D005213 ORTHO05D006229 1.3e-08 65.1 305 26.2
Phvul.001G044400 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 2.2e-08 64.3 353 27.8
HPP92_013274 Vanilla planifolia HOM05D005213 ORTHO05D006229 2.2e-08 64.3 259 31.3
BcaC04g19528 Brassica carinata HOM05D005213 ORTHO05D006229 2.9e-08 63.9 92 48.9
BraA03t10362Z Brassica rapa HOM05D005213 ORTHO05D006229 2.9e-08 63.9 42 78.6
Sopen08g021200 Solanum pennellii HOM05D005213 ORTHO05D006229 2.9e-08 63.9 112 33.9
A03p10500 Brassica napus HOM05D005213 ORTHO05D006229 3.8e-08 63.5 313 29.1
Thhalv10014216m.g Eutrema salsugineum HOM05D005213 ORTHO05D006229 3.8e-08 63.5 92 51.1
unitig_747.g21889 Utricularia gibba HOM05D005213 ORTHO05D006229 5.0e-08 63.2 215 34.0
arahy.Tifrunner.gnm1.ann1.698XEU Arachis hypogaea HOM05D005213 ORTHO05D006229 8.5e-08 62.4 325 27.4
CARHR191550 Cardamine hirsuta HOM05D005213 ORTHO05D006229 1.1e-07 62.0 181 34.3
BcaB08g36461 Brassica carinata HOM05D005213 ORTHO05D006229 1.4e-07 61.6 93 49.5
BcaC03g13850 Brassica carinata HOM05D005213 ORTHO05D006229 1.9e-07 61.2 307 27.7
BolC2t07127H Brassica oleracea HOM05D005213 ORTHO05D006229 1.9e-07 61.2 307 27.7
VMungo0477G0001 Vigna mungo HOM05D005213 ORTHO05D006229 1.9e-07 61.2 397 27.7
HanXRQChr09g0261901 Helianthus annuus HOM05D005213 ORTHO05D006229 3.2e-07 60.5 156 35.3
BNapus_Darmor_BZH_scaffold_38p00940 Brassica napus HOM05D005213 ORTHO05D006229 4.2e-07 60.1 310 27.7
BraA02t05631Z Brassica rapa HOM05D005213 ORTHO05D006229 4.2e-07 60.1 310 27.7
Gohir.A05G037666 Gossypium hirsutum HOM05D005213 ORTHO05D006229 4.2e-07 60.1 146 33.6
C09p54690 Brassica napus HOM05D005213 ORTHO05D006229 5.5e-07 59.7 131 39.7
BolC9t58333H Brassica oleracea HOM05D005213 ORTHO05D006229 5.5e-07 59.7 131 39.7
Actinidia26432 Actinidia chinensis HOM05D005213 ORTHO05D006229 7.2e-07 59.3 166 32.5
arahy.Tifrunner.gnm1.ann1.3D63PE Arachis hypogaea HOM05D005213 ORTHO05D006229 1.2e-06 58.5 314 28.3
BcaB01g04752 Brassica carinata HOM05D005213 ORTHO05D006229 1.2e-06 58.5 243 31.7


User provided reference genes

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