Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3437 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 2.3e-134 482.3 251 100.0
CDE02G4269 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 1.1e-118 430.3 251 90.4
TAR264G0002 Trochodendron aralioides HOM05D006007 ORTHO05D007518 1.1e-38 164.5 272 45.2
MBI19_g00630_MAGBIO Magnolia biondii HOM05D006007 ORTHO05D007518 2.1e-34 150.2 274 40.1
Manes.02G054700 Manihot esculenta HOM05D006007 ORTHO05D007518 1.8e-33 147.1 267 41.2
FAN05G3222 Fragaria x ananassa HOM05D006007 ORTHO05D007518 3.0e-33 146.4 259 45.6
FAN09G0451 Fragaria x ananassa HOM05D006007 ORTHO05D007518 8.8e-33 144.8 257 45.9
ATR0177G014 Amborella trichopoda HOM05D006007 ORTHO05D007518 7.5e-32 141.7 237 42.2
RcHm_v2.0_Chr2g0165881 Rosa chinensis HOM05D006007 ORTHO05D007518 2.2e-31 140.2 254 44.1
Phvul.008G033600 Phaseolus vulgaris HOM05D006007 ORTHO05D007518 1.4e-30 137.5 265 41.9
FAN02G0083 Fragaria x ananassa HOM05D006007 ORTHO05D007518 1.8e-30 137.1 254 44.1
MELO3C022635.2 Cucumis melo HOM05D006007 ORTHO05D007518 2.4e-30 136.7 251 39.0
Cfa007665 Carpinus fangiana HOM05D006007 ORTHO05D007518 4.1e-30 136.0 244 42.2
Nn4g23426 Nelumbo nucifera HOM05D006007 ORTHO05D007518 1.2e-29 134.4 257 38.5
PSO478G1877 Papaver somniferum HOM05D006007 ORTHO05D007518 1.2e-29 134.4 227 41.0
PSO017G6380 Papaver somniferum HOM05D006007 ORTHO05D007518 1.6e-29 134.0 261 39.5
FvH4_6g46910 Fragaria vesca HOM05D006007 ORTHO05D007518 2.0e-29 133.7 254 43.7
QL02p067640 Quercus lobata HOM05D006007 ORTHO05D007518 2.0e-29 133.7 258 40.3
Ciclev10011374m.g Citrus clementina HOM05D006007 ORTHO05D007518 7.7e-29 131.7 227 42.3
Glyma.18G266400 Glycine max HOM05D006007 ORTHO05D007518 1.5e-27 127.5 265 40.8
Potri.017G093600 Populus trichocarpa HOM05D006007 ORTHO05D007518 1.9e-27 127.1 266 38.7
Atru.chr8.458 Acer truncatum HOM05D006007 ORTHO05D007518 4.2e-27 125.9 265 38.1
Sabra17G0082500 Salix brachista HOM05D006007 ORTHO05D007518 2.7e-26 123.2 268 37.3
GSVIVG01032902001 Vitis vinifera HOM05D006007 ORTHO05D007518 1.4e-25 120.9 276 39.9
TWI32G0586 Tripterygium wilfordii HOM05D006007 ORTHO05D007518 1.8e-25 120.6 256 38.3
CiPaw.03G088800 Carya illinoinensis HOM05D006007 ORTHO05D007518 4.0e-25 119.4 245 38.8
Eucgr.J01380 Eucalyptus grandis HOM05D006007 ORTHO05D007518 6.8e-25 118.6 252 38.9
Duzib264G0491 Durio zibethinus HOM05D006007 ORTHO05D007518 8.8e-25 118.2 270 37.0
CSS0026219 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 1.2e-24 117.9 263 37.6
Sed0005820 Sechium edule HOM05D006007 ORTHO05D007518 1.2e-24 117.9 257 35.8
Cc07_g04190 Coffea canephora HOM05D006007 ORTHO05D007518 2.6e-24 116.7 258 38.4
Lalb_Chr17g0337001 Lupinus albus HOM05D006007 ORTHO05D007518 3.4e-24 116.3 269 38.3
FAN14G4567 Fragaria x ananassa HOM05D006007 ORTHO05D007518 7.5e-24 115.2 269 39.4
HPP92_007829 Vanilla planifolia HOM05D006007 ORTHO05D007518 2.2e-23 113.6 290 35.5
DCAR_005549 Daucus carota HOM05D006007 ORTHO05D007518 3.7e-23 112.8 246 37.8
Gohir.A11G072800 Gossypium hirsutum HOM05D006007 ORTHO05D007518 3.7e-23 112.8 287 35.5
Lj1g0023913 Lotus japonicus HOM05D006007 ORTHO05D007518 6.3e-23 112.1 231 37.7
MSTRG.23885 Avicennia marina HOM05D006007 ORTHO05D007518 9.2e-22 108.2 241 39.0
MD09G1066400 Malus domestica HOM05D006007 ORTHO05D007518 9.2e-22 108.2 250 36.8
CSS0007202 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 1.2e-21 107.8 263 36.5
Gorai.007G082800 Gossypium raimondii HOM05D006007 ORTHO05D007518 1.6e-21 107.5 282 33.7
vmacro05632 Vaccinium macrocarpon HOM05D006007 ORTHO05D007518 1.6e-21 107.5 228 39.0
Medtr7g013700 Medicago truncatula HOM05D006007 ORTHO05D007518 4.5e-21 105.9 237 39.2
Ca_04352_v3 Cicer arietinum L. HOM05D006007 ORTHO05D007518 5.9e-21 105.5 299 34.1
Haze_14433 Corylus avellana HOM05D006007 ORTHO05D007518 1.0e-20 104.8 308 32.5
Gohir.D11G077100 Gossypium hirsutum HOM05D006007 ORTHO05D007518 1.0e-20 104.8 282 33.3
Nitab4.5_0000212g0230 Nicotiana tabacum HOM05D006007 ORTHO05D007518 1.3e-20 104.4 234 37.2
CAN.G398.20 Capsicum annuum HOM05D006007 ORTHO05D007518 2.3e-20 103.6 230 34.8
CANSAT64G1701 Cannabis sativa HOM05D006007 ORTHO05D007518 3.8e-20 102.8 284 35.2
Solyc02g066940.4 Solanum lycopersicum HOM05D006007 ORTHO05D007518 1.1e-19 101.3 233 36.5
Aqoxy3G03693 Aquilegia oxysepala HOM05D006007 ORTHO05D007518 1.9e-19 100.5 266 35.7
MBI15_g14467_MAGBIO Magnolia biondii HOM05D003623 ORTHO05D007518 1.9e-19 100.5 131 48.1
Zm00001eb008620 Zea mays HOM05D006007 ORTHO05D007518 3.3e-19 99.8 311 33.1
PGSC0003DMG400025145 Solanum tuberosum HOM05D006007 ORTHO05D007518 7.3e-19 98.6 236 36.4
Thhalv10003901m.g Eutrema salsugineum HOM05D006007 ORTHO05D007518 9.5e-19 98.2 267 37.5
Dinv34943 Davidia involucrata HOM05D006007 ORTHO05D007518 2.1e-18 97.1 127 49.6
Lj4A118G52 Lonicera japonica HOM05D006007 ORTHO05D007518 4.7e-18 95.9 150 42.7
Cpa.g.sc14.172 Carica papaya HOM05D006007 ORTHO05D007518 6.1e-18 95.5 141 48.2
Glyma.08G245100 Glycine max HOM05D006007 ORTHO05D007518 6.1e-18 95.5 142 50.7
Oeu004412.3 Olea europaea HOM05D006007 ORTHO05D007518 1.0e-17 94.7 292 31.2
A02p36640 Brassica napus HOM05D006007 ORTHO05D007518 1.8e-17 94.0 245 35.9
THA.LOC104823889 Tarenaya hassleriana HOM05D006007 ORTHO05D007518 1.8e-17 94.0 296 36.1
BcaB07g30079 Brassica carinata HOM05D006007 ORTHO05D007518 2.3e-17 93.6 269 36.8
ECA246G0757 Erigeron canadensis HOM05D006007 ORTHO05D007518 3.0e-17 93.2 267 36.3
Nitab4.5_0010627g0030 Nicotiana tabacum HOM05D006007 ORTHO05D007518 3.0e-17 93.2 251 34.3
Thecc.04G095300 Theobroma cacao HOM05D006007 ORTHO05D007518 3.0e-17 93.2 227 34.8
BraA02t08659Z Brassica rapa HOM05D006007 ORTHO05D007518 4.0e-17 92.8 245 35.5
Ca_30479_v3 Cicer arietinum L. HOM05D006007 ORTHO05D007518 5.2e-17 92.4 139 46.8
Hma1.2p1_0481F.1_g162140 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 2.6e-16 90.1 253 34.8
Hma1.2p1_0481F.1_g162150 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 2.6e-16 90.1 253 34.8
FAN05G2596 Fragaria x ananassa HOM05D006007 ORTHO05D007518 7.5e-16 88.6 119 56.3
EL10Ac2g03139 Beta vulgaris HOM05D006007 ORTHO05D007518 1.3e-15 87.8 263 33.1
CiPaw.04G055900 Carya illinoinensis HOM05D006007 ORTHO05D007518 4.9e-15 85.9 119 49.6
CsaV3_4G009190 Cucumis sativus L. HOM05D006007 ORTHO05D007518 4.9e-15 85.9 127 43.3
Aa31LG2G3900 Aethionema arabicum HOM05D006007 ORTHO05D007518 6.4e-15 85.5 169 39.6
Sc10g0004670 Simmondsia chinensis HOM05D006007 ORTHO05D007518 8.3e-15 85.1 211 34.1
BcaC03g17580 Brassica carinata HOM05D006007 ORTHO05D007518 3.2e-14 83.2 246 34.6
Sopen02g016130 Solanum pennellii HOM05D006007 ORTHO05D007518 3.2e-14 83.2 106 50.9
C02p55600 Brassica napus HOM05D006007 ORTHO05D007518 7.0e-14 82.0 246 34.6
BolC2t11616H Brassica oleracea HOM05D006007 ORTHO05D007518 7.0e-14 82.0 246 34.6
Carub.0005s0814 Capsella rubella HOM05D006007 ORTHO05D007518 1.2e-13 81.3 291 31.3
ClCG07G016350 Citrullus lanatus HOM05D006007 ORTHO05D007518 1.2e-13 81.3 378 25.9
Lsat_1_v5_gn_3_97780 Lactuca sativa HOM05D006007 ORTHO05D007518 2.7e-13 80.1 207 35.3
HPP92_007750 Vanilla planifolia HOM05D006007 ORTHO05D007518 3.5e-13 79.7 137 40.9
Sp2g17990 Schrenkiella parvula HOM05D006007 ORTHO05D007518 5.9e-13 79.0 266 35.0
AT3G29390 Arabidopsis thaliana HOM05D006007 ORTHO05D007518 7.8e-13 78.6 88 52.3
Peaxi162Scf00991g00329 Petunia axillaris HOM05D006007 ORTHO05D007518 1.3e-12 77.8 129 45.7
Hund15552 Selenicereus undatus HOM05D006007 ORTHO05D007518 1.3e-12 77.8 75 60.0
COL.COLO4_07027 Corchorus olitorius HOM05D006007 ORTHO05D007518 2.3e-12 77.0 99 48.5
HanXRQChr17g0546081 Helianthus annuus HOM05D006007 ORTHO05D007518 3.9e-12 76.3 240 33.3
Oeu051018.1 Olea europaea HOM05D006007 ORTHO05D007518 5.0e-12 75.9 95 48.4
BcaC03g17562 Brassica carinata HOM05D006007 ORTHO05D007518 6.6e-12 75.5 85 50.6
Migut.H00628 Erythranthe guttata HOM05D006007 ORTHO05D007518 1.5e-11 74.3 107 44.9
AL5G19590 Arabidopsis lyrata HOM05D006007 ORTHO05D007518 2.5e-11 73.6 171 37.4
Rhsim10G0048800 Rhododendron simsii HOM05D006007 ORTHO05D007518 2.5e-11 73.6 264 31.1
unitig_52.g17640 Utricularia gibba HOM05D006007 ORTHO05D007518 2.5e-11 73.6 209 31.1
PGR004G1158 Punica granatum HOM05D006007 ORTHO05D007518 3.3e-11 73.2 214 36.4
Prupe.3G255200 Prunus persica HOM05D006007 ORTHO05D007518 4.3e-11 72.8 127 45.7
Psat3g201920 Pisum sativum HOM05D006007 ORTHO05D007518 5.6e-11 72.4 87 57.5
Ah.10g032260 Amaranthus hybridus HOM05D006007 ORTHO05D007518 7.3e-11 72.0 163 37.4
SEGI_40404 Sequoiadendron giganteum HOM05D006007 ORTHO05D007518 7.3e-11 72.0 81 48.1
SalBow1G7079 Salvia bowleyana HOM05D006007 ORTHO05D007518 2.0e-08 63.9 127 44.1
arahy.Tifrunner.gnm1.ann1.EQE0CJ Arachis hypogaea HOM05D006007 ORTHO05D007518 3.4e-08 63.2 351 28.2
arahy.Tifrunner.gnm1.ann1.J3LTHX Arachis hypogaea HOM05D006007 ORTHO05D007518 3.4e-08 63.2 351 28.2
AUR62018183 Chenopodium quinoa HOM05D006007 ORTHO05D007518 1.7e-07 60.8 115 43.5
AUR62038668 Chenopodium quinoa HOM05D006007 ORTHO05D007518 2.2e-07 60.5 155 36.8


User provided reference genes

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