Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3414 Ceratophyllum demersum HOM05D004607 ORTHO05D005836 3.2e-78 295.0 153 100.0
CDE05G1839 Ceratophyllum demersum HOM05D001594 ORTHO05D006997 2.9e-55 218.8 153 75.2
MBI11_g22240_MAGBIO Magnolia biondii HOM05D004607 ORTHO05D005836 7.7e-40 167.5 142 59.2
Prupe.7G182100 Prunus persica HOM05D004607 ORTHO05D005836 1.2e-37 160.2 128 64.1
Nitab4.5_0000467g0060 Nicotiana tabacum HOM05D004607 ORTHO05D005836 2.1e-37 159.5 135 58.5
ATR0807G168 Amborella trichopoda HOM05D004607 ORTHO05D005836 3.6e-37 158.7 135 56.3
CiPaw.08G181500 Carya illinoinensis HOM05D004607 ORTHO05D005836 3.6e-37 158.7 138 62.3
Dinv40187 Davidia involucrata HOM05D004607 ORTHO05D005836 1.4e-36 156.8 131 59.5
MD02G1116800 Malus domestica HOM05D004607 ORTHO05D005836 1.8e-36 156.4 141 58.9
RcHm_v2.0_Chr2g0097211 Rosa chinensis HOM05D004607 ORTHO05D005836 4.0e-36 155.2 128 61.7
CiPaw.07G003100 Carya illinoinensis HOM05D004607 ORTHO05D005836 5.2e-36 154.8 138 56.5
Dinv08165 Davidia involucrata HOM05D004607 ORTHO05D005836 6.8e-36 154.5 131 57.3
MD02G1117000 Malus domestica HOM05D004607 ORTHO05D005836 6.8e-36 154.5 141 58.2
Potri.005G101300 Populus trichocarpa HOM05D004607 ORTHO05D005836 2.6e-35 152.5 142 55.6
Migut.C01149 Erythranthe guttata HOM05D004607 ORTHO05D005836 3.4e-35 152.1 131 57.3
Migut.K01195 Erythranthe guttata HOM05D004607 ORTHO05D005836 3.4e-35 152.1 131 57.3
Peaxi162Scf01051g00133 Petunia axillaris HOM05D004607 ORTHO05D005836 4.4e-35 151.8 136 60.3
Cc07_g11810 Coffea canephora HOM05D004607 ORTHO05D005836 5.7e-35 151.4 131 59.5
TWI73G0051 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 5.7e-35 151.4 131 61.8
TWI09G0436 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 7.5e-35 151.0 129 61.2
Aa31LG2G12510 Aethionema arabicum HOM05D004607 ORTHO05D005836 9.8e-35 150.6 127 57.5
CSS0013050 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 9.8e-35 150.6 129 58.9
Migut.G00971 Erythranthe guttata HOM05D004607 ORTHO05D005836 9.8e-35 150.6 131 57.3
THA.LOC104826422 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 1.3e-34 150.2 134 56.0
GSVIVG01026644001 Vitis vinifera HOM05D004607 ORTHO05D005836 1.7e-34 149.8 130 57.7
FvH4_1g10350 Fragaria vesca HOM05D004607 ORTHO05D005836 2.9e-34 149.1 128 59.4
CSS0035278 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 4.9e-34 148.3 130 57.7
Eucgr.I00568 Eucalyptus grandis HOM05D004607 ORTHO05D005836 4.9e-34 148.3 129 57.4
FAN28G2666 Fragaria x ananassa HOM05D004607 ORTHO05D005836 6.4e-34 147.9 128 59.4
MSTRG.1461 Avicennia marina HOM05D004607 ORTHO05D005836 8.3e-34 147.5 131 59.5
Sed0016741 Sechium edule HOM05D004607 ORTHO05D005836 8.3e-34 147.5 129 56.6
Solyc02g082710.3 Solanum lycopersicum HOM05D004607 ORTHO05D005836 8.3e-34 147.5 131 59.5
Sopen02g027460 Solanum pennellii HOM05D004607 ORTHO05D005836 8.3e-34 147.5 131 59.5
Actinidia17362 Actinidia chinensis HOM05D004607 ORTHO05D005836 1.1e-33 147.1 141 54.6
Lsat_1_v5_gn_3_68061 Lactuca sativa HOM05D004607 ORTHO05D005836 1.1e-33 147.1 131 57.3
Sopen02g012590 Solanum pennellii HOM05D004607 ORTHO05D005836 1.1e-33 147.1 135 53.3
Actinidia22900 Actinidia chinensis HOM05D004607 ORTHO05D005836 1.4e-33 146.7 147 54.4
CANSAT80G1685 Cannabis sativa HOM05D004607 ORTHO05D005836 1.4e-33 146.7 129 56.6
CANSAT80G2088 Cannabis sativa HOM05D004607 ORTHO05D005836 1.4e-33 146.7 129 56.6
Gorai.010G212400 Gossypium raimondii HOM05D004607 ORTHO05D005836 1.4e-33 146.7 140 55.0
Nitab4.5_0011694g0010 Nicotiana tabacum HOM05D004607 ORTHO05D005836 1.4e-33 146.7 131 60.3
Solyc02g038815.1 Solanum lycopersicum HOM05D004607 ORTHO05D005836 1.4e-33 146.7 135 53.3
THA.LOC104819160 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 1.4e-33 146.7 142 50.0
Migut.M00637 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.8e-33 146.4 131 55.0
BolC8t48369H Brassica oleracea HOM05D004607 ORTHO05D005836 2.4e-33 146.0 141 52.5
BraA08t33239Z Brassica rapa HOM05D004607 ORTHO05D005836 2.4e-33 146.0 141 52.5
CAN.G1238.9 Capsicum annuum HOM05D004607 ORTHO05D005836 2.4e-33 146.0 136 56.6
Cpa.g.c27001.3 Carica papaya HOM05D004607 ORTHO05D005836 2.4e-33 146.0 141 57.4
Carub.0007s2507 Capsella rubella HOM05D004607 ORTHO05D005836 5.4e-33 144.8 141 52.5
CARHR222820 Cardamine hirsuta HOM05D004607 ORTHO05D005836 5.4e-33 144.8 141 50.4
Hma1.2p1_0300F.1_g118020 Hydrangea macrophylla HOM05D004607 ORTHO05D005836 5.4e-33 144.8 130 56.9
C07p47890 Brassica napus HOM05D004607 ORTHO05D005836 7.0e-33 144.4 134 53.0
BolC7t45311H Brassica oleracea HOM05D004607 ORTHO05D005836 7.0e-33 144.4 134 53.0
CsaV3_3G000280 Cucumis sativus L. HOM05D004607 ORTHO05D005836 7.0e-33 144.4 127 58.3
Thhalv10026376m.g Eutrema salsugineum HOM05D004607 ORTHO05D005836 9.2e-33 144.1 137 54.7
AL7G38550 Arabidopsis lyrata HOM05D004607 ORTHO05D005836 1.6e-32 143.3 141 51.8
Os06g0198700 Oryza sativa ssp. japonica HOM05D004607 ORTHO05D005836 2.0e-32 142.9 131 53.4
Zm00001eb320900 Zea mays HOM05D004607 ORTHO05D005836 2.7e-32 142.5 131 55.7
Nn2g14487 Nelumbo nucifera HOM05D004607 ORTHO05D005836 3.5e-32 142.1 130 53.8
Sp7g14990 Schrenkiella parvula HOM05D004607 ORTHO05D005836 4.6e-32 141.7 141 52.5
A03p49830 Brassica napus HOM05D004607 ORTHO05D005836 1.3e-31 140.2 134 53.0
BraA03t14078Z Brassica rapa HOM05D004607 ORTHO05D005836 1.3e-31 140.2 134 53.0
AT4G16444 Arabidopsis thaliana HOM05D004607 ORTHO05D005836 5.0e-31 138.3 141 51.1
Zm00001eb373950 Zea mays HOM05D004607 ORTHO05D005836 6.6e-31 137.9 131 53.4
FAN26G2101 Fragaria x ananassa HOM05D004607 ORTHO05D005836 4.3e-30 135.2 158 48.7
HanXRQChr09g0259831 Helianthus annuus HOM05D004607 ORTHO05D005836 4.3e-30 135.2 131 54.2
Lalb_Chr05g0229661 Lupinus albus HOM05D004607 ORTHO05D005836 4.3e-30 135.2 132 53.8
BcaC07g37988 Brassica carinata HOM05D004607 ORTHO05D005836 7.3e-30 134.4 142 50.7
Glyma.09G198400 Glycine max HOM05D004607 ORTHO05D005836 7.3e-30 134.4 128 54.7
Haze_04009 Corylus avellana HOM05D004607 ORTHO05D005836 1.2e-29 133.7 112 62.5
Lsat_1_v5_gn_8_112021 Lactuca sativa HOM05D000005 ORTHO05D000012 1.2e-29 133.7 131 54.2
Haze_03663 Corylus avellana HOM05D004607 ORTHO05D005836 2.8e-29 132.5 139 53.2
A08p12190 Brassica napus HOM05D004607 ORTHO05D005836 3.6e-29 132.1 166 44.6
Migut.N00197 Erythranthe guttata HOM05D004607 ORTHO05D005836 4.7e-29 131.7 155 46.5
Lj4g0003075 Lotus japonicus HOM05D004607 ORTHO05D005836 4.7e-29 131.7 129 53.5
PGR042G1958 Punica granatum HOM05D004607 ORTHO05D005836 4.7e-29 131.7 131 55.0
Haze_03657 Corylus avellana HOM05D004607 ORTHO05D005836 8.0e-29 131.0 117 60.7
HanXRQChr16g0531851 Helianthus annuus HOM05D004607 ORTHO05D005836 8.0e-29 131.0 130 53.8
Ca_02856_v3 Cicer arietinum L. HOM05D004607 ORTHO05D005836 1.8e-28 129.8 129 53.5
Medtr8g073600 Medicago truncatula HOM05D004607 ORTHO05D005836 2.3e-28 129.4 128 53.9
TAR628G0874 Trochodendron aralioides HOM05D004607 ORTHO05D005836 2.3e-28 129.4 121 56.2
HPP92_002453 Vanilla planifolia HOM05D004607 ORTHO05D005836 6.8e-28 127.9 130 51.5
PSO210G1290 Papaver somniferum HOM05D004607 ORTHO05D005836 8.9e-28 127.5 135 50.4
PSO761G0125 Papaver somniferum HOM05D004607 ORTHO05D005836 8.9e-28 127.5 135 50.4
ECA246G3880 Erigeron canadensis HOM05D004607 ORTHO05D005836 1.2e-27 127.1 140 49.3
unitig_26.g9912 Utricularia gibba HOM05D004607 ORTHO05D005836 5.8e-27 124.8 130 51.5
Aqoxy5G01013 Aquilegia oxysepala HOM05D004607 ORTHO05D005836 9.8e-27 124.0 114 59.6
Thecc.01G005800 Theobroma cacao HOM05D004607 ORTHO05D005836 9.8e-27 124.0 110 61.8
Nitab4.5_0000702g0180 Nicotiana tabacum HOM05D004607 ORTHO05D005836 1.3e-26 123.6 124 56.5
Ciclev10016602m.g Citrus clementina HOM05D004607 ORTHO05D005836 2.9e-26 122.5 111 59.5
FvH4_1g10370 Fragaria vesca HOM05D004607 ORTHO05D005836 4.9e-26 121.7 132 51.5
Lj2g0013322 Lotus japonicus HOM05D004607 ORTHO05D005836 6.4e-26 121.3 140 45.0
Sc16g0000240 Simmondsia chinensis HOM05D004607 ORTHO05D005836 8.3e-26 120.9 110 60.0
PGSC0003DMG400001520 Solanum tuberosum HOM05D004607 ORTHO05D005836 1.1e-25 120.6 113 59.3
Glyma.01G158900 Glycine max HOM05D004607 ORTHO05D005836 2.4e-25 119.4 127 52.0
ClCG10G000250 Citrullus lanatus HOM05D004607 ORTHO05D005836 4.1e-25 118.6 116 55.2
Lalb_Chr09g0324751 Lupinus albus HOM05D004607 ORTHO05D005836 4.1e-25 118.6 138 47.8
Psat0s2561g0240 Pisum sativum HOM05D004607 ORTHO05D005836 4.1e-25 118.6 132 53.0
SGA_v2.0_scaffold52G18984 Striga asiatica HOM05D004607 ORTHO05D005836 9.2e-25 117.5 102 58.8
vmacro23502 Vaccinium macrocarpon HOM05D004607 ORTHO05D005836 1.2e-24 117.1 110 56.4
Lalb_Chr05g0214781 Lupinus albus HOM05D004607 ORTHO05D005836 1.6e-24 116.7 138 48.6
Phvul.002G116550 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 2.7e-24 115.9 126 46.8
Phvul.003G269900 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 3.5e-24 115.5 128 47.7
EL10Ac3g05419 Beta vulgaris HOM05D004607 ORTHO05D005836 4.6e-24 115.2 110 59.1
BcaNung00194 Brassica carinata HOM05D004607 ORTHO05D005836 4.6e-24 115.2 141 46.1
arahy.Tifrunner.gnm1.ann1.322DBQ Arachis hypogaea HOM05D004607 ORTHO05D005836 1.3e-23 113.6 126 49.2
arahy.Tifrunner.gnm1.ann1.WAU4HL Arachis hypogaea HOM05D004607 ORTHO05D005836 1.3e-23 113.6 126 49.2
Glyma.11G085750 Glycine max HOM05D004607 ORTHO05D005836 1.3e-23 113.6 127 49.6
SalBow7G0705 Salvia bowleyana HOM05D004607 ORTHO05D005836 1.7e-23 113.2 181 39.8
Duzib187G1597 Durio zibethinus HOM05D004607 ORTHO05D005836 3.9e-23 112.1 123 54.5
AUR62031422 Chenopodium quinoa HOM05D004607 ORTHO05D005836 5.0e-23 111.7 101 60.4
SalBow7G2290 Salvia bowleyana HOM05D004607 ORTHO05D005836 8.6e-23 110.9 184 39.1
Duzib264G0749 Durio zibethinus HOM05D004607 ORTHO05D005836 5.6e-22 108.2 106 56.6
SalBow7G4137 Salvia bowleyana HOM05D004607 ORTHO05D005836 9.5e-22 107.5 182 38.5
TPR.G33861 Trifolium pratense HOM05D004607 ORTHO05D005836 1.2e-21 107.1 124 50.0
Rhsim10G0196300 Rhododendron simsii HOM05D004607 ORTHO05D005836 1.6e-21 106.7 112 50.0
Psat4g104720 Pisum sativum HOM05D004607 ORTHO05D026060 2.1e-21 106.3 101 57.4
AUR62021120 Chenopodium quinoa HOM05D004607 ORTHO05D005836 4.7e-21 105.1 118 53.4
ECA232G4775 Erigeron canadensis HOM05D004607 ORTHO05D005836 4.7e-21 105.1 138 47.8
QL06p052929 Quercus lobata HOM05D004607 ORTHO05D005836 8.1e-21 104.4 88 52.3
Atru.chr8.743 Acer truncatum HOM05D004607 ORTHO05D005836 1.1e-20 104.0 94 60.6
Sabra05G0083700 Salix brachista HOM05D004607 ORTHO05D005836 2.3e-20 102.8 94 60.6
COL.COLO4_13415 Corchorus olitorius HOM05D004607 ORTHO05D005836 8.9e-20 100.9 94 61.7
MD15G1231800 Malus domestica HOM05D004607 ORTHO05D005836 8.9e-20 100.9 87 52.9
Nitab4.5_0001365g0040 Nicotiana tabacum HOM05D004607 ORTHO05D005836 1.2e-19 100.5 114 52.6
Hund00045 Selenicereus undatus HOM05D004607 ORTHO05D005836 4.4e-19 98.6 123 48.8
CAN.G328.18 Capsicum annuum HOM05D004607 ORTHO05D005836 7.5e-19 97.8 83 57.8
SGA_v2.0_scaffold24G10477 Striga asiatica HOM05D004607 ORTHO05D005836 1.7e-18 96.7 87 49.4
TPR.G21990 Trifolium pratense HOM05D004607 ORTHO05D005836 1.0e-15 87.4 129 38.8
PGSC0003DMG400017476 Solanum tuberosum HOM05D004607 ORTHO05D005836 1.3e-15 87.0 80 45.0
unitig_749.g13934 Utricularia gibba HOM05D004607 ORTHO05D005836 2.3e-15 86.3 98 51.0
Manes.14G160966 Manihot esculenta HOM05D004607 ORTHO05D005836 1.9e-14 83.2 127 37.8
Mapoly0007s0238 Marchantia polymorpha HOM05D004607 ORTHO05D005836 3.3e-14 82.4 133 36.1
Peaxi162Scf00580g00027 Petunia axillaris HOM05D004607 ORTHO05D005836 1.2e-13 80.5 136 38.2
TAR376G0723 Trochodendron aralioides HOM05D004607 ORTHO05D005836 2.8e-13 79.3 72 61.1
CSS0045229 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 6.8e-12 74.7 130 36.2
Pp3c7_8860 Physcomitrium patens HOM05D004607 ORTHO05D005836 8.4e-10 67.8 126 34.1
VMungo1215G0163 Vigna mungo HOM05D004607 ORTHO05D005836 8.4e-10 67.8 71 57.7
AagrBONN_evm.TU.Sc2ySwM_362.230 Anthoceros agrestis HOM05D004607 ORTHO05D005836 1.4e-09 67.0 100 40.0
QL06p052933 Quercus lobata HOM05D004607 ORTHO05D005836 3.5e-08 62.4 47 72.3
Cre09.g387504 Chlamydomonas reinhardtii HOM05D004607 ORTHO05D005836 2.3e-07 59.7 140 32.1
Gohir.D06G180900 Gossypium hirsutum HOM05D004607 ORTHO05D005836 5.1e-07 58.5 54 64.8
Duzib147G0723 Durio zibethinus HOM05D004607 ORTHO05D005836 6.6e-07 58.2 42 78.6
Gohir.A06G172006 Gossypium hirsutum HOM05D004607 ORTHO05D005836 6.6e-07 58.2 54 63.0
MELO3C013722.2 Cucumis melo HOM05D004607 ORTHO05D005836 1.1e-06 57.4 42 73.8


User provided reference genes

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