Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3412 Ceratophyllum demersum HOM05D005365 ORTHO05D006910 1.0e-152 543.5 295 100.0
CDE05G1264 Ceratophyllum demersum HOM05D005365 ORTHO05D006910 1.2e-100 370.5 239 82.8
Haze_14277 Corylus avellana HOM05D005365 ORTHO05D006910 2.6e-76 289.7 204 70.6
Dinv28185 Davidia involucrata HOM05D005365 ORTHO05D006910 2.6e-76 289.7 195 75.9
Nn4g24353 Nelumbo nucifera HOM05D005365 ORTHO05D006910 2.6e-76 289.7 204 71.1
MBI19_g22067_MAGBIO Magnolia biondii HOM05D005365 ORTHO05D006910 3.4e-76 289.3 192 75.0
Cfa007794 Carpinus fangiana HOM05D005365 ORTHO05D006910 1.7e-75 287.0 204 69.6
TAR374G0610 Trochodendron aralioides HOM05D005365 ORTHO05D006910 8.4e-75 284.6 204 71.1
CiPaw.03G073200 Carya illinoinensis HOM05D005365 ORTHO05D006910 5.4e-74 282.0 197 71.6
Sabra04G0056600 Salix brachista HOM05D005365 ORTHO05D006910 5.4e-74 282.0 206 68.4
Potri.004G085500 Populus trichocarpa HOM05D005365 ORTHO05D006910 1.2e-73 280.8 196 70.4
PSO017G3744 Papaver somniferum HOM05D005365 ORTHO05D006910 2.7e-73 279.6 206 69.4
Manes.03G027200 Manihot esculenta HOM05D005365 ORTHO05D006910 4.6e-73 278.9 223 65.0
PSO478G2448 Papaver somniferum HOM05D005365 ORTHO05D006910 7.8e-73 278.1 206 68.4
Medtr3g065300 Medicago truncatula HOM05D005365 ORTHO05D006910 1.7e-72 276.9 204 69.1
QL02p059099 Quercus lobata HOM05D005365 ORTHO05D006910 1.7e-72 276.9 204 69.6
COL.COLO4_13431 Corchorus olitorius HOM05D005365 ORTHO05D006910 2.3e-72 276.6 209 66.5
Lj2C520T1 Lonicera japonica HOM05D005365 ORTHO05D006910 3.0e-72 276.2 204 68.1
Glyma.18G041000 Glycine max HOM05D005365 ORTHO05D006910 3.9e-72 275.8 204 68.1
Thecc.04G055200 Theobroma cacao HOM05D005365 ORTHO05D006910 3.9e-72 275.8 209 67.0
Rhsim10G0178300 Rhododendron simsii HOM05D005365 ORTHO05D006910 6.6e-72 275.0 196 70.9
CSS0031268 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 1.9e-71 273.5 192 72.4
GSVIVG01014028001 Vitis vinifera HOM05D005365 ORTHO05D006910 1.9e-71 273.5 196 70.4
Ca_17092_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 2.5e-71 273.1 204 67.2
Ca_17099_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 2.5e-71 273.1 204 67.2
Duzib133G0311 Durio zibethinus HOM05D005365 ORTHO05D006910 2.5e-71 273.1 209 66.5
Gohir.A11G168700 Gossypium hirsutum HOM05D005365 ORTHO05D006910 3.3e-71 272.7 196 70.9
Gohir.D11G174900 Gossypium hirsutum HOM05D005365 ORTHO05D006910 3.3e-71 272.7 196 70.9
Gorai.007G187500 Gossypium raimondii HOM05D005365 ORTHO05D006910 3.3e-71 272.7 196 70.9
arahy.Tifrunner.gnm1.ann1.MH7SY7 Arachis hypogaea HOM05D005365 ORTHO05D006910 4.3e-71 272.3 195 68.7
vmacro07709 Vaccinium macrocarpon HOM05D005365 ORTHO05D006910 5.6e-71 271.9 196 70.9
arahy.Tifrunner.gnm1.ann1.WJY350 Arachis hypogaea HOM05D005365 ORTHO05D006910 7.3e-71 271.6 195 69.2
GSVIVG01038362001 Vitis vinifera HOM05D005365 ORTHO05D006910 9.6e-71 271.2 196 70.4
Glyma.11G215600 Glycine max HOM05D005365 ORTHO05D006910 1.3e-70 270.8 204 67.2
MSTRG.15661 Avicennia marina HOM05D005365 ORTHO05D006910 1.6e-70 270.4 204 67.2
Lj6g0003323 Lotus japonicus HOM05D005365 ORTHO05D006910 1.6e-70 270.4 202 67.3
Phvul.001G229600 Phaseolus vulgaris HOM05D005365 ORTHO05D006910 1.6e-70 270.4 204 67.6
CANSAT80G2352 Cannabis sativa HOM05D005365 ORTHO05D006910 2.1e-70 270.0 205 63.4
CSS0046739 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 2.8e-70 269.6 192 71.4
RcHm_v2.0_Chr3g0491161 Rosa chinensis HOM05D005365 ORTHO05D006910 3.6e-70 269.2 205 67.3
TWI77G0914 Tripterygium wilfordii HOM05D005365 ORTHO05D006910 3.6e-70 269.2 196 70.4
Aqoxy2G03929 Aquilegia oxysepala HOM05D005365 ORTHO05D006910 4.8e-70 268.9 206 67.0
Atru.chr1.1986 Acer truncatum HOM05D005365 ORTHO05D006910 6.2e-70 268.5 205 66.3
THA.LOC104805627 Tarenaya hassleriana HOM05D005365 ORTHO05D006910 8.1e-70 268.1 206 66.5
ECA238G2923 Erigeron canadensis HOM05D005365 ORTHO05D006910 1.1e-69 267.7 219 63.0
FAN19G1822 Fragaria x ananassa HOM05D005365 ORTHO05D006910 1.1e-69 267.7 208 65.4
Hma1.2p1_1583F.1_g291990 Hydrangea macrophylla HOM05D005365 ORTHO05D006910 1.1e-69 267.7 184 73.4
VMungo1383G2900 Vigna mungo HOM05D005365 ORTHO05D006910 1.4e-69 267.3 204 67.2
Actinidia06487 Actinidia chinensis HOM05D005365 ORTHO05D006910 1.8e-69 266.9 203 65.5
Ciclev10010965m.g Citrus clementina HOM05D005365 ORTHO05D006910 3.1e-69 266.2 197 67.5
Cpa.g.sc116.71 Carica papaya HOM05D005365 ORTHO05D006910 6.9e-69 265.0 203 66.5
MD09G1270700 Malus domestica HOM05D005365 ORTHO05D006910 9.0e-69 264.6 197 67.0
Sed0006074 Sechium edule HOM05D005365 ORTHO05D006910 9.0e-69 264.6 197 68.5
Dinv19044 Davidia involucrata HOM05D005365 ORTHO05D006910 1.2e-68 264.2 204 65.2
Lsat_1_v5_gn_2_68700 Lactuca sativa HOM05D005365 ORTHO05D006910 1.2e-68 264.2 204 64.7
FvH4_1g30230 Fragaria vesca HOM05D005365 ORTHO05D006910 2.0e-68 263.5 208 65.4
FAN26G1336 Fragaria x ananassa HOM05D005365 ORTHO05D006910 2.6e-68 263.1 197 68.0
Lalb_Chr15g0084951 Lupinus albus HOM05D005365 ORTHO05D006910 3.4e-68 262.7 204 64.7
Prupe.3G017700 Prunus persica HOM05D005365 ORTHO05D006910 3.4e-68 262.7 205 65.9
SEGI_18021 Sequoiadendron giganteum HOM05D005365 ORTHO05D006910 3.4e-68 262.7 204 61.8
Nitab4.5_0000201g0010 Nicotiana tabacum HOM05D005365 ORTHO05D006910 4.5e-68 262.3 204 65.2
Psat5g120520 Pisum sativum HOM05D005365 ORTHO05D006910 4.5e-68 262.3 204 66.7
MD17G1268900 Malus domestica HOM05D005365 ORTHO05D006910 5.8e-68 261.9 197 68.0
Nitab4.5_0012785g0010 Nicotiana tabacum HOM05D005365 ORTHO05D006910 9.9e-68 261.2 204 64.2
Hund13093 Selenicereus undatus HOM05D005365 ORTHO05D006910 1.3e-67 260.8 213 60.6
FAN23G0266 Fragaria x ananassa HOM05D005365 ORTHO05D006910 1.7e-67 260.4 208 65.4
Eucgr.F02871 Eucalyptus grandis HOM05D005365 ORTHO05D006910 2.9e-67 259.6 204 62.7
Migut.K00918 Erythranthe guttata HOM05D005365 ORTHO05D006910 1.4e-66 257.3 213 62.9
Sopen11g006160 Solanum pennellii HOM05D005365 ORTHO05D006910 1.9e-66 256.9 213 59.2
ClCG03G008820 Citrullus lanatus HOM05D005365 ORTHO05D006910 3.2e-66 256.1 204 63.7
Solyc11g011370.2 Solanum lycopersicum HOM05D005365 ORTHO05D006910 3.2e-66 256.1 213 58.7
Sp7g04480 Schrenkiella parvula HOM05D005365 ORTHO05D006910 4.2e-66 255.8 197 64.0
Aa31LG9G17470 Aethionema arabicum HOM05D005365 ORTHO05D006910 9.3e-66 254.6 205 62.9
Ah.10g032430 Amaranthus hybridus HOM05D005365 ORTHO05D006910 1.6e-65 253.8 204 64.7
MELO3C022831.2 Cucumis melo HOM05D005365 ORTHO05D006910 3.5e-65 252.7 204 62.7
CsaV3_5G023940 Cucumis sativus L. HOM05D005365 ORTHO05D006910 3.5e-65 252.7 204 63.7
BcaC02g09592 Brassica carinata HOM05D005365 ORTHO05D006910 7.9e-65 251.5 197 62.4
C04p44500 Brassica napus HOM05D005365 ORTHO05D006910 7.9e-65 251.5 197 62.4
BolC4t26020H Brassica oleracea HOM05D005365 ORTHO05D006910 7.9e-65 251.5 197 62.4
BcaB06g27110 Brassica carinata HOM05D005365 ORTHO05D006910 1.0e-64 251.1 197 62.4
Carub.0007s3279 Capsella rubella HOM05D005365 ORTHO05D006910 1.3e-64 250.8 196 62.8
AUR62018225 Chenopodium quinoa HOM05D005365 ORTHO05D006910 1.3e-64 250.8 201 62.7
AL7G46400 Arabidopsis lyrata HOM05D005365 ORTHO05D006910 1.8e-64 250.4 196 63.3
AT5G37630 Arabidopsis thaliana HOM05D005365 ORTHO05D006910 1.8e-64 250.4 196 63.3
A04p10780 Brassica napus HOM05D005365 ORTHO05D006910 1.8e-64 250.4 197 62.4
BraA04t16742Z Brassica rapa HOM05D005365 ORTHO05D006910 1.8e-64 250.4 197 62.4
CARHR215230 Cardamine hirsuta HOM05D005365 ORTHO05D006910 1.8e-64 250.4 196 63.3
AUR62037789 Chenopodium quinoa HOM05D005365 ORTHO05D006910 1.8e-64 250.4 201 62.2
Cc07_g13300 Coffea canephora HOM05D005365 ORTHO05D006910 2.3e-64 250.0 199 63.8
ATR0753G168 Amborella trichopoda HOM05D005365 ORTHO05D006910 3.0e-64 249.6 198 63.6
DCAR_028454 Daucus carota HOM05D005365 ORTHO05D006910 3.9e-64 249.2 213 58.7
Sc11g0004580 Simmondsia chinensis HOM05D005365 ORTHO05D006910 3.9e-64 249.2 220 60.0
EL10Ac2g03189 Beta vulgaris HOM05D005365 ORTHO05D006910 1.9e-63 246.9 195 65.1
unitig_0.g2645 Utricularia gibba HOM05D005365 ORTHO05D006910 2.5e-63 246.5 204 62.3
CAN.G222.54 Capsicum annuum HOM05D005365 ORTHO05D006910 4.3e-63 245.7 204 59.8
PGR004G1341 Punica granatum HOM05D005365 ORTHO05D006910 7.4e-63 245.0 202 60.4
Thhalv10027629m.g Eutrema salsugineum HOM05D005365 ORTHO05D006910 9.6e-63 244.6 196 62.2
SGA_v2.0_scaffold45G17160 Striga asiatica HOM05D005365 ORTHO05D006910 1.3e-62 244.2 243 53.9
Zm00001eb379890 Zea mays HOM05D005365 ORTHO05D006910 1.3e-59 234.2 223 53.8
HPP92_006138 Vanilla planifolia HOM05D005365 ORTHO05D006910 3.8e-59 232.6 204 57.8
Peaxi162Scf00562g00038 Petunia axillaris HOM05D005365 ORTHO05D006910 5.1e-56 222.2 190 60.0
MBI19_g43231_MAGBIO Magnolia biondii HOM05D005365 ORTHO05D006910 8.7e-56 221.5 180 65.0
Pp3c22_14670 Physcomitrium patens HOM05D005365 ORTHO05D006910 6.5e-43 178.7 207 44.4
TPR.G24911 Trifolium pratense HOM05D005365 ORTHO05D006910 1.2e-41 174.5 133 68.4
Mapoly0032s0119 Marchantia polymorpha HOM05D005365 ORTHO05D006910 2.2e-38 163.7 208 41.3
Oeu012494.1 Olea europaea HOM05D005365 ORTHO05D006910 1.4e-37 161.0 116 69.0
SMO367G0263 Selaginella moellendorffii HOM05D005365 ORTHO05D006910 1.8e-37 160.6 196 45.4
GSVIVG01030692001 Vitis vinifera HOM05D005365 ORTHO05D006910 5.3e-37 159.1 134 62.7
CBR_g39392 Chara braunii HOM05D000019 ORTHO05D000048 2.2e-35 153.7 211 38.4
AagrBONN_evm.TU.Sc2ySwM_228.4009 Anthoceros agrestis HOM05D005365 ORTHO05D006910 5.7e-31 139.0 203 38.4
SGA_v2.0_scaffold45G17196 Striga asiatica HOM05D005365 ORTHO05D006910 7.4e-31 138.7 105 65.7
PRCOL_00005851 Prasinoderma coloniale HOM05D005365 ORTHO05D006910 1.0e-24 118.2 189 35.4
Oeu012492.1 Olea europaea HOM05D005365 ORTHO05D006910 4.4e-23 112.8 101 54.5
MCO13G329 Micromonas commoda HOM05D005365 ORTHO05D006910 1.5e-18 97.8 179 35.8
Gorai.005G096400 Gossypium raimondii HOM05D005365 ORTHO05D015145 1.2e-15 88.2 63 66.7
Gohir.D04G112220 Gossypium hirsutum HOM05D005365 ORTHO05D006910 4.4e-15 86.3 66 62.1
TPR.G7041 Trifolium pratense HOM05D005365 ORTHO05D006910 2.2e-11 73.9 52 69.2
Gohir.D09G013833 Gossypium hirsutum HOM05D005365 ORTHO05D015145 1.8e-08 64.3 56 58.9


User provided reference genes

Program Settings