Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 6.5e-262 906.7 427 100.0
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 5.6e-181 637.9 422 72.0
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 3.7e-172 608.6 424 67.9
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 4.1e-171 605.1 422 66.8
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 4.1e-171 605.1 422 66.8
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 5.3e-171 604.7 422 69.2
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 6.5e-169 597.8 423 66.4
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 2.5e-168 595.9 423 65.7
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 3.2e-168 595.5 422 66.8
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 4.2e-168 595.1 424 65.1
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 5.5e-168 594.7 423 64.8
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 7.2e-168 594.3 430 65.3
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 9.4e-168 594.0 428 65.2
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 2.7e-167 592.4 423 67.6
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 7.9e-167 590.9 428 67.1
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 7.9e-167 590.9 423 66.0
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 7.9e-167 590.9 423 65.5
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 1.4e-166 590.1 425 66.1
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 3.9e-166 588.6 422 65.9
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 6.7e-166 587.8 418 65.8
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 6.7e-166 587.8 424 65.3
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 8.8e-166 587.4 423 63.8
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 8.8e-166 587.4 410 67.1
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 1.1e-165 587.0 423 65.5
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 2.5e-165 585.9 413 66.3
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 2.5e-165 585.9 421 64.1
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 3.3e-165 585.5 420 64.8
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 3.3e-165 585.5 416 66.6
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 3.3e-165 585.5 416 66.8
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 5.7e-165 584.7 424 65.1
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 5.7e-165 584.7 426 64.3
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.3e-164 583.6 417 65.2
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.7e-164 583.2 417 65.0
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 1.7e-164 583.2 426 64.1
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 2.2e-164 582.8 417 65.0
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 3.7e-164 582.0 419 65.6
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 8.2e-164 580.9 417 64.7
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 8.2e-164 580.9 418 65.1
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 1.1e-163 580.5 421 65.1
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.1e-163 580.5 417 64.7
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 1.1e-163 580.5 420 63.6
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 1.1e-163 580.5 415 64.6
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 1.4e-163 580.1 426 62.9
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 1.8e-163 579.7 424 64.9
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 3.1e-163 578.9 415 63.6
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 4.1e-163 578.6 427 65.8
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 5.3e-163 578.2 416 65.9
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 6.9e-163 577.8 420 65.0
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 1.2e-162 577.0 417 65.9
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 1.2e-162 577.0 420 63.6
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 2.6e-162 575.9 423 65.2
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 4.5e-162 575.1 418 64.6
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 5.9e-162 574.7 422 63.7
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 7.7e-162 574.3 418 65.1
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 1.0e-161 573.9 428 63.3
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 1.0e-161 573.9 428 63.3
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 1.0e-161 573.9 420 64.0
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 1.3e-161 573.5 428 63.8
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 1.3e-161 573.5 424 64.6
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 1.3e-161 573.5 425 64.5
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 3.8e-161 572.0 430 64.0
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 1.1e-160 570.5 424 63.2
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 1.1e-160 570.5 415 64.6
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 1.4e-160 570.1 416 65.1
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 1.9e-160 569.7 416 64.9
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 2.5e-160 569.3 424 62.7
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 3.2e-160 568.9 372 71.0
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 3.2e-160 568.9 429 62.7
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 5.5e-160 568.2 412 65.5
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 7.2e-160 567.8 425 63.1
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 2.1e-159 566.2 354 71.5
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 2.7e-159 565.8 427 62.5
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 3.6e-159 565.5 425 62.6
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 1.4e-158 563.5 421 62.7
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 1.4e-158 563.5 427 62.1
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 3.0e-158 562.4 426 61.7
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 3.0e-158 562.4 419 62.8
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 3.0e-158 562.4 420 63.1
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 5.1e-158 561.6 354 72.6
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 8.8e-158 560.8 421 62.2
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 8.8e-158 560.8 344 73.3
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 7.4e-157 557.8 354 70.9
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 1.3e-156 557.0 378 69.3
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 2.8e-156 555.8 417 61.2
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 2.8e-156 555.8 420 62.6
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 4.8e-156 555.1 417 61.2
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 1.4e-155 553.5 418 60.8
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 3.1e-155 552.4 426 62.0
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 3.1e-155 552.4 412 63.8
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 4.1e-155 552.0 419 60.4
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 4.1e-155 552.0 417 60.2
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 9.1e-155 550.8 387 65.6
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 1.2e-154 550.4 418 61.5
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 3.4e-154 548.9 419 61.3
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 1.3e-153 547.0 419 61.1
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 1.3e-153 547.0 418 60.3
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 2.2e-153 546.2 419 60.6
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 3.8e-153 545.4 421 62.5
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 3.2e-152 542.3 419 60.4
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 3.2e-152 542.3 419 60.4
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 3.2e-152 542.3 432 60.6
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 1.2e-151 540.4 410 62.7
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 1.2e-151 540.4 354 68.4
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 4.7e-151 538.5 429 58.5
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 8.0e-151 537.7 333 71.5
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 2.6e-149 532.7 333 72.1
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 1.7e-148 530.0 348 66.7
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 2.2e-148 529.6 372 64.0
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 2.4e-147 526.2 401 62.8
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 2.0e-146 523.1 427 59.3
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 7.7e-146 521.2 426 59.6
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 6.1e-135 485.0 410 57.8
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 1.2e-133 480.7 356 62.1
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 5.0e-129 465.3 369 57.5
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 1.9e-128 463.4 356 62.6
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 4.7e-127 458.8 280 72.1
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 8.9e-126 454.5 280 72.5
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 1.5e-125 453.8 422 53.6
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 2.5e-104 383.3 323 57.9
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 1.3e-97 360.9 364 50.5
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 1.6e-95 354.0 213 71.4
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 4.2e-91 339.3 275 55.3
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 3.5e-90 336.3 206 73.8
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 2.4e-86 323.6 213 67.1
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 2.5e-59 233.8 242 52.9
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 9.1e-46 188.7 243 46.5
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.4e-22 111.7 91 54.9
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 9.1e-22 109.0 58 79.3
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 5.0e-20 103.2 80 57.5
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 4.4e-16 90.1 112 42.9


User provided reference genes

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