Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 7.1e-96 354.0 185 100.0
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 9.0e-59 230.7 180 68.3
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 5.5e-56 221.5 180 65.6
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 1.3e-54 216.9 181 64.6
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 1.8e-54 216.5 181 65.2
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 2.3e-54 216.1 181 64.1
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 2.3e-54 216.1 183 65.0
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 3.0e-54 215.7 180 65.0
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 3.0e-54 215.7 183 65.0
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 3.9e-54 215.3 180 66.1
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 1.5e-53 213.4 181 63.0
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 1.9e-53 213.0 181 63.5
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 1.9e-53 213.0 181 64.6
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 5.7e-53 211.5 181 65.7
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 1.6e-52 209.9 180 62.8
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 2.1e-52 209.5 182 64.3
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 8.2e-52 207.6 180 62.2
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 1.4e-51 206.8 180 62.8
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 1.8e-51 206.5 180 65.6
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 4.1e-51 205.3 180 61.7
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 4.1e-51 205.3 182 61.0
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 5.3e-51 204.9 175 64.0
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 6.9e-51 204.5 184 63.0
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 9.0e-51 204.1 180 61.7
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 1.2e-50 203.8 180 61.1
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 1.2e-50 203.8 186 62.4
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 1.5e-50 203.4 182 63.2
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.5e-50 203.4 182 63.2
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 2.0e-50 203.0 180 62.2
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.0e-50 203.0 182 63.2
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 2.0e-50 203.0 180 62.2
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 2.0e-50 203.0 181 61.9
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 3.4e-50 202.2 182 62.6
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 3.4e-50 202.2 180 60.6
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 7.6e-50 201.1 186 60.8
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 1.3e-49 200.3 181 61.3
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 1.7e-49 199.9 182 60.4
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 2.2e-49 199.5 181 59.7
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 3.8e-49 198.7 183 62.3
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 3.8e-49 198.7 184 61.4
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 3.8e-49 198.7 181 58.6
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 5.0e-49 198.4 183 60.7
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 5.0e-49 198.4 180 60.6
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 5.0e-49 198.4 187 61.0
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 6.5e-49 198.0 180 60.0
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 8.5e-49 197.6 182 62.1
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 1.1e-48 197.2 180 58.3
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 2.5e-48 196.1 186 59.7
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 3.2e-48 195.7 180 60.6
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 4.2e-48 195.3 183 60.7
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 4.2e-48 195.3 181 59.7
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 1.2e-47 193.7 180 60.0
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 1.6e-47 193.4 180 60.6
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 2.7e-47 192.6 172 61.0
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 3.6e-47 192.2 181 59.1
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 3.6e-47 192.2 181 59.1
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 3.6e-47 192.2 183 58.5
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 4.6e-47 191.8 189 57.7
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 4.6e-47 191.8 180 57.2
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 6.1e-47 191.4 183 60.7
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 6.1e-47 191.4 179 60.9
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 6.1e-47 191.4 116 80.2
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 1.0e-46 190.7 180 60.6
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 1.3e-46 190.3 181 58.0
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 1.8e-46 189.9 181 58.0
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 1.8e-46 189.9 180 60.6
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 3.0e-46 189.1 184 60.3
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 3.0e-46 189.1 181 61.3
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 6.7e-46 188.0 181 58.6
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 8.7e-46 187.6 182 57.1
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 8.7e-46 187.6 182 57.1
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 3.3e-45 185.7 186 57.5
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 3.3e-45 185.7 180 59.4
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 5.7e-45 184.9 177 58.2
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 7.4e-45 184.5 181 59.1
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 1.3e-44 183.7 170 59.4
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 1.3e-44 183.7 183 58.5
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 2.2e-44 183.0 132 68.2
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 6.3e-44 181.4 181 58.0
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 6.3e-44 181.4 181 56.9
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 1.1e-43 180.6 117 75.2
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 1.1e-43 180.6 180 57.2
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 2.4e-43 179.5 159 62.9
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 3.1e-43 179.1 184 58.7
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 6.9e-43 177.9 185 56.8
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 6.9e-43 177.9 114 76.3
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 6.9e-43 177.9 103 85.4
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 9.1e-43 177.6 186 58.6
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 1.2e-42 177.2 167 59.3
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 1.2e-42 177.2 135 69.6
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 1.2e-42 177.2 127 69.3
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 1.5e-42 176.8 133 66.2
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 1.5e-42 176.8 182 56.6
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 1.5e-42 176.8 182 56.6
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 2.6e-42 176.0 108 80.6
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 2.6e-42 176.0 172 59.3
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 2.6e-42 176.0 136 67.6
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 4.5e-42 175.3 184 57.1
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 4.5e-42 175.3 114 75.4
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 5.9e-42 174.9 174 58.6
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 5.9e-42 174.9 183 56.8
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 1.3e-41 173.7 179 57.0
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 1.7e-41 173.3 174 58.6
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 1.7e-41 173.3 136 67.6
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 2.2e-41 172.9 174 58.0
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 2.2e-41 172.9 174 58.0
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 3.8e-41 172.2 166 57.8
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 3.8e-41 172.2 160 59.4
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 5.0e-41 171.8 135 65.9
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 6.5e-41 171.4 132 68.9
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 1.9e-40 169.9 105 78.1
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 3.2e-40 169.1 107 74.8
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 1.6e-39 166.8 170 57.6
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 3.9e-38 162.2 183 50.8
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 8.8e-38 161.0 148 60.8
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 5.7e-37 158.3 137 59.1
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 3.4e-34 149.1 85 85.9
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 8.5e-33 144.4 176 47.2
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 5.2e-30 135.2 126 55.6
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 3.7e-28 129.0 171 45.0
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 1.8e-27 126.7 145 48.3
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 5.3e-27 125.2 121 52.9
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 1.7e-25 120.2 145 51.0
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 3.2e-24 115.9 133 47.4
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 5.7e-21 105.1 140 43.6
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 1.7e-20 103.6 105 45.7
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 2.4e-19 99.8 126 54.0
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 7.2e-16 88.2 95 53.7
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 1.6e-07 60.5 98 29.6
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 8.0e-07 58.2 100 30.0
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 1.0e-06 57.8 98 30.6
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 1.4e-06 57.4 98 29.6
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 1.8e-06 57.0 98 29.6
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.8e-06 57.0 98 29.6
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 1.8e-06 57.0 100 28.0
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 2.3e-06 56.6 98 29.6
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 3.0e-06 56.2 98 29.6
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 5.2e-06 55.5 98 28.6
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 5.2e-06 55.5 98 28.6
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 5.2e-06 55.5 98 28.6


User provided reference genes

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