Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3337 Ceratophyllum demersum HOM05D003980 ORTHO05D005301 7.4e-65 250.4 125 100.0
Nn4g22168 Nelumbo nucifera HOM05D003980 ORTHO05D005301 1.7e-37 159.5 116 69.0
Manes.06G125700 Manihot esculenta HOM05D003980 ORTHO05D005301 6.5e-37 157.5 124 66.1
GSVIVG01008633001 Vitis vinifera HOM05D003980 ORTHO05D005301 1.5e-36 156.4 116 69.0
MSTRG.11233 Avicennia marina HOM05D003980 ORTHO05D005301 1.9e-36 156.0 116 68.1
Ca_17584_v3 Cicer arietinum L. HOM05D003980 ORTHO05D005301 1.9e-36 156.0 116 69.0
TAR371G0735 Trochodendron aralioides HOM05D003980 ORTHO05D005301 1.9e-36 156.0 116 68.1
COL.COLO4_37237 Corchorus olitorius HOM05D003980 ORTHO05D005301 3.3e-36 155.2 116 69.0
THA.LOC104821537 Tarenaya hassleriana HOM05D003980 ORTHO05D005301 3.3e-36 155.2 116 69.8
Duzib205G0834 Durio zibethinus HOM05D003980 ORTHO05D005301 4.2e-36 154.8 116 69.0
Nitab4.5_0002450g0020 Nicotiana tabacum HOM05D003980 ORTHO05D005301 4.2e-36 154.8 116 69.8
Thecc.03G138500 Theobroma cacao HOM05D003980 ORTHO05D005301 4.2e-36 154.8 116 69.8
SalBow7G4845 Salvia bowleyana HOM05D003980 ORTHO05D005301 7.2e-36 154.1 117 69.2
TPR.G21586 Trifolium pratense HOM05D003980 ORTHO05D005301 7.2e-36 154.1 116 67.2
Ciclev10030650m.g Citrus clementina HOM05D003980 ORTHO05D005301 9.5e-36 153.7 116 69.0
Dinv23210 Davidia involucrata HOM05D003980 ORTHO05D005301 1.2e-35 153.3 116 68.1
Duzib084G0479 Durio zibethinus HOM05D003980 ORTHO05D005301 1.2e-35 153.3 116 69.8
QL10p000901 Quercus lobata HOM05D003980 ORTHO05D005301 1.2e-35 153.3 116 68.1
CiPaw.11G001400 Carya illinoinensis HOM05D003980 ORTHO05D005301 1.6e-35 152.9 116 69.8
Gohir.A09G248100 Gossypium hirsutum HOM05D003980 ORTHO05D005301 1.6e-35 152.9 116 70.7
Nn3g16303 Nelumbo nucifera HOM05D003980 ORTHO05D005301 1.6e-35 152.9 116 68.1
Nitab4.5_0000663g0190 Nicotiana tabacum HOM05D003980 ORTHO05D005301 1.6e-35 152.9 116 69.0
PGR083G0225 Punica granatum HOM05D003980 ORTHO05D005301 1.6e-35 152.9 117 68.4
Medtr3g498735 Medicago truncatula HOM05D003980 ORTHO05D005301 2.1e-35 152.5 116 67.2
Solyc03g118350.4 Solanum lycopersicum HOM05D003980 ORTHO05D005301 2.1e-35 152.5 115 68.7
Sopen03g037250 Solanum pennellii HOM05D003980 ORTHO05D005301 2.1e-35 152.5 115 68.7
DCAR_025658 Daucus carota HOM05D003980 ORTHO05D005301 2.8e-35 152.1 116 68.1
EL10Ac5g11306 Beta vulgaris HOM05D003980 ORTHO05D005301 3.6e-35 151.8 125 60.8
Lj4g0027174 Lotus japonicus HOM05D003980 ORTHO05D005301 3.6e-35 151.8 116 66.4
PGSC0003DMG401014249 Solanum tuberosum HOM05D003980 ORTHO05D005301 3.6e-35 151.8 115 68.7
CSS0008437 Camellia sinensis var. sinensis HOM05D003980 ORTHO05D005301 4.7e-35 151.4 116 67.2
TWI14G0519 Tripterygium wilfordii HOM05D003980 ORTHO05D005301 4.7e-35 151.4 116 68.1
Gohir.D09G248900 Gossypium hirsutum HOM05D003980 ORTHO05D005301 6.1e-35 151.0 116 70.7
Gorai.006G273300 Gossypium raimondii HOM05D003980 ORTHO05D005301 6.1e-35 151.0 116 70.7
ATR0693G246 Amborella trichopoda HOM05D003980 ORTHO05D005301 8.0e-35 150.6 116 66.4
Dinv13736 Davidia involucrata HOM05D003980 ORTHO05D005301 1.0e-34 150.2 116 66.4
Rhsim08G0195900 Rhododendron simsii HOM05D003980 ORTHO05D005301 1.0e-34 150.2 116 68.1
TPR.G12812 Trifolium pratense HOM05D003980 ORTHO05D005301 1.0e-34 150.2 116 65.5
VMungo1309G0598 Vigna mungo HOM05D003980 ORTHO05D005301 1.0e-34 150.2 116 66.4
Haze_07113 Corylus avellana HOM05D003980 ORTHO05D005301 1.4e-34 149.8 116 66.4
Glyma.04G200300 Glycine max HOM05D003980 ORTHO05D005301 1.4e-34 149.8 116 64.7
Peaxi162Scf00314g00535 Petunia axillaris HOM05D003980 ORTHO05D005301 1.4e-34 149.8 116 69.8
vmacro19166 Vaccinium macrocarpon HOM05D003980 ORTHO05D005301 1.8e-34 149.4 116 68.1
Cfa018720 Carpinus fangiana HOM05D003980 ORTHO05D005301 2.3e-34 149.1 116 65.5
Ca_16085_v3 Cicer arietinum L. HOM05D003980 ORTHO05D005301 2.3e-34 149.1 115 64.3
MELO3C026163.2 Cucumis melo HOM05D003980 ORTHO05D005301 2.3e-34 149.1 116 67.2
CsaV3_1G000110 Cucumis sativus L. HOM05D003980 ORTHO05D005301 2.3e-34 149.1 116 67.2
SEGI_36335 Sequoiadendron giganteum HOM05D003980 ORTHO05D005301 2.3e-34 149.1 114 66.7
unitig_22.g6271 Utricularia gibba HOM05D003980 ORTHO05D005301 2.3e-34 149.1 117 70.1
CDE01G0794 Ceratophyllum demersum HOM05D003980 ORTHO05D005301 4.0e-34 148.3 116 64.7
ClCG06G018320 Citrullus lanatus HOM05D003980 ORTHO05D005301 5.2e-34 147.9 116 67.2
Lsat_1_v5_gn_4_84700 Lactuca sativa HOM05D003980 ORTHO05D005301 5.2e-34 147.9 116 64.7
Potri.012G105800 Populus trichocarpa HOM05D003980 ORTHO05D005301 5.2e-34 147.9 116 67.2
Ah.02g114660 Amaranthus hybridus HOM05D003980 ORTHO05D005301 6.8e-34 147.5 116 67.2
Glyma.05G201200 Glycine max HOM05D003980 ORTHO05D005301 6.8e-34 147.5 116 65.5
TWI39G0366 Tripterygium wilfordii HOM05D003980 ORTHO05D005301 6.8e-34 147.5 116 66.4
Eucgr.B00073 Eucalyptus grandis HOM05D003980 ORTHO05D005301 8.9e-34 147.1 116 65.5
Os01g0311500 Oryza sativa ssp. japonica HOM05D003980 ORTHO05D005301 8.9e-34 147.1 115 66.1
RcHm_v2.0_Chr7g0188941 Rosa chinensis HOM05D003980 ORTHO05D005301 8.9e-34 147.1 116 65.5
HPP92_006911 Vanilla planifolia HOM05D003980 ORTHO05D005301 8.9e-34 147.1 122 61.5
Atru.chr6.1901 Acer truncatum HOM05D003980 ORTHO05D005301 1.2e-33 146.7 116 66.4
CSS0000982 Camellia sinensis var. sinensis HOM05D003980 ORTHO05D005301 1.2e-33 146.7 116 67.2
ECA232G4466 Erigeron canadensis HOM05D003980 ORTHO05D005301 1.2e-33 146.7 116 64.7
Medtr8g100000 Medicago truncatula HOM05D003980 ORTHO05D005301 1.2e-33 146.7 116 63.8
Prupe.5G143400 Prunus persica HOM05D003980 ORTHO05D005301 1.2e-33 146.7 116 65.5
Cc04_g05920 Coffea canephora HOM05D003980 ORTHO05D005301 2.0e-33 146.0 117 64.1
FAN04G0599 Fragaria x ananassa HOM05D003980 ORTHO05D005301 2.0e-33 146.0 116 65.5
MD14G1148800 Malus domestica HOM05D003980 ORTHO05D005301 2.0e-33 146.0 116 64.7
Phvul.002G282600 Phaseolus vulgaris HOM05D003980 ORTHO05D005301 2.0e-33 146.0 116 66.4
Potri.015G105000 Populus trichocarpa HOM05D003980 ORTHO05D005301 2.0e-33 146.0 116 65.5
Sabra15G0125200 Salix brachista HOM05D003980 ORTHO05D005301 2.0e-33 146.0 116 66.4
Hund10056 Selenicereus undatus HOM05D003980 ORTHO05D005301 2.0e-33 146.0 116 66.4
arahy.Tifrunner.gnm1.ann1.JJXJ29 Arachis hypogaea HOM05D003980 ORTHO05D005301 2.6e-33 145.6 116 64.7
CANSAT56G3290 Cannabis sativa HOM05D003980 ORTHO05D005301 2.6e-33 145.6 116 63.8
HanXRQChr16g0498871 Helianthus annuus HOM05D003980 ORTHO05D005301 2.6e-33 145.6 116 64.7
MD06G1132400 Malus domestica HOM05D003980 ORTHO05D005301 2.6e-33 145.6 116 64.7
Aa31LG11G3070 Aethionema arabicum HOM05D003980 ORTHO05D005301 3.4e-33 145.2 116 65.5
arahy.Tifrunner.gnm1.ann1.US1BEE Arachis hypogaea HOM05D003980 ORTHO05D005301 3.4e-33 145.2 116 64.7
CARHR189830 Cardamine hirsuta HOM05D003980 ORTHO05D005301 4.4e-33 144.8 116 64.7
Migut.I00610 Erythranthe guttata HOM05D003980 ORTHO05D005301 4.4e-33 144.8 115 64.3
Sc04g0000260 Simmondsia chinensis HOM05D003980 ORTHO05D005301 4.4e-33 144.8 116 66.4
Aqoxy5G03175 Aquilegia oxysepala HOM05D003980 ORTHO05D005301 5.7e-33 144.4 115 66.1
FAN18G3345 Fragaria x ananassa HOM05D003980 ORTHO05D005301 5.7e-33 144.4 116 64.7
Psat5g054480 Pisum sativum HOM05D003980 ORTHO05D005301 5.7e-33 144.4 116 64.7
Lj9A485G82 Lonicera japonica HOM05D003980 ORTHO05D005301 7.5e-33 144.1 116 62.1
Thhalv10003616m.g Eutrema salsugineum HOM05D003980 ORTHO05D005301 9.8e-33 143.7 116 66.4
Lj1g0007025 Lotus japonicus HOM05D003980 ORTHO05D005301 9.8e-33 143.7 118 64.4
Lalb_Chr13g0297021 Lupinus albus HOM05D003980 ORTHO05D005301 9.8e-33 143.7 116 64.7
Phvul.009G164700 Phaseolus vulgaris HOM05D003980 ORTHO05D005301 9.8e-33 143.7 116 62.1
Glyma.08G008600 Glycine max HOM05D003980 ORTHO05D005301 1.3e-32 143.3 118 64.4
Sabra12G0078100 Salix brachista HOM05D003980 ORTHO05D005301 1.3e-32 143.3 116 65.5
FAN13G1995 Fragaria x ananassa HOM05D003980 ORTHO05D005301 1.7e-32 142.9 116 63.8
PSO591G0475 Papaver somniferum HOM05D003980 ORTHO05D005301 1.7e-32 142.9 116 62.9
PSO832G3889 Papaver somniferum HOM05D003980 ORTHO05D005301 1.7e-32 142.9 116 62.9
Hund02497 Selenicereus undatus HOM05D003980 ORTHO05D005301 1.7e-32 142.9 115 65.2
FAN08G3345 Fragaria x ananassa HOM05D003980 ORTHO05D005301 2.2e-32 142.5 116 63.8
Lalb_Chr12g0202411 Lupinus albus HOM05D003980 ORTHO05D005301 2.2e-32 142.5 116 63.8
Sp2g23510 Schrenkiella parvula HOM05D003980 ORTHO05D005301 2.2e-32 142.5 117 65.0
FvH4_5g09220 Fragaria vesca HOM05D003980 ORTHO05D005301 2.8e-32 142.1 116 63.8
arahy.Tifrunner.gnm1.ann1.1NY8SK Arachis hypogaea HOM05D003980 ORTHO05D005301 3.7e-32 141.7 116 62.1
HanXRQChr09g0273931 Helianthus annuus HOM05D003980 ORTHO05D005301 3.7e-32 141.7 116 63.8
Lalb_Chr23g0272921 Lupinus albus HOM05D003980 ORTHO05D005301 4.9e-32 141.4 116 61.2
AUR62009517 Chenopodium quinoa HOM05D003980 ORTHO05D005301 6.3e-32 141.0 116 62.1
AUR62034771 Chenopodium quinoa HOM05D003980 ORTHO05D005301 6.3e-32 141.0 116 62.1
Ca_10885_v3 Cicer arietinum L. HOM05D003980 ORTHO05D005301 6.3e-32 141.0 115 64.3
Ca_14153_v3 Cicer arietinum L. HOM05D003980 ORTHO05D005301 1.4e-31 139.8 120 61.7
C07p43870 Brassica napus HOM05D003980 ORTHO05D005301 2.4e-31 139.0 117 64.1
BcaNung01844 Brassica carinata HOM05D003980 ORTHO05D005301 3.1e-31 138.7 117 64.1
BolC7t44915H Brassica oleracea HOM05D003980 ORTHO05D005301 3.1e-31 138.7 117 64.1
A06p34620 Brassica napus HOM05D003980 ORTHO05D005301 4.1e-31 138.3 117 62.4
BraA06t26390Z Brassica rapa HOM05D003980 ORTHO05D005301 4.1e-31 138.3 117 62.4
Zm00001eb130450 Zea mays HOM05D003980 ORTHO05D005301 9.2e-31 137.1 115 61.7
Actinidia25530 Actinidia chinensis HOM05D003980 ORTHO05D005301 1.3e-29 133.3 104 69.2
AL6G34990 Arabidopsis lyrata HOM05D003980 ORTHO05D005301 1.7e-29 132.9 116 60.3
AT5G23720 Arabidopsis thaliana HOM05D003980 ORTHO05D005301 3.8e-29 131.7 116 59.5
DCAR_021407 Daucus carota HOM05D003980 ORTHO05D005301 5.0e-29 131.3 116 60.3
Lj5A88T63 Lonicera japonica HOM05D003980 ORTHO05D005301 1.1e-28 130.2 128 56.2
Sed0025035 Sechium edule HOM05D003980 ORTHO05D005301 1.1e-28 130.2 125 58.4
VMungo0251G0815 Vigna mungo HOM05D003980 ORTHO05D005301 1.1e-28 130.2 137 54.7
SGA_v2.0_scaffold143G35744 Striga asiatica HOM05D003980 ORTHO05D005301 1.9e-28 129.4 97 68.0
Carub.0006s2147 Capsella rubella HOM05D003980 ORTHO05D005301 2.5e-28 129.0 116 58.6
Zm00001eb340730 Zea mays HOM05D003980 ORTHO05D005301 2.8e-27 125.6 123 54.5
Os01g0347000 Oryza sativa ssp. japonica HOM05D003980 ORTHO05D005301 3.6e-27 125.2 116 58.6
MBI19_g26308_MAGBIO Magnolia biondii HOM05D003980 ORTHO05D005301 3.0e-26 122.1 177 42.4
Actinidia18313 Actinidia chinensis HOM05D003980 ORTHO05D005301 7.5e-25 117.5 88 69.3
Psat5g054520 Pisum sativum HOM05D003980 ORTHO05D005301 1.9e-23 112.8 116 52.6
Cpa.g.sc4.108 Carica papaya HOM05D003980 ORTHO05D005301 1.2e-22 110.2 77 72.7
CSS0032153 Camellia sinensis var. sinensis HOM05D003980 ORTHO05D005301 6.0e-22 107.8 81 69.1
Pp3c9_1160 Physcomitrium patens HOM05D003980 ORTHO05D005301 8.6e-21 104.0 125 50.4
Pp3c9_1168 Physcomitrium patens HOM05D003980 ORTHO05D005301 8.6e-21 104.0 125 50.4
SMO116G0359 Selaginella moellendorffii HOM05D003980 ORTHO05D005301 1.1e-18 97.1 117 46.2
Mapoly0024s0055 Marchantia polymorpha HOM05D003980 ORTHO05D005301 4.4e-17 91.7 115 47.0
SHI14120 Sapria himalayana HOM05D003980 ORTHO05D005301 8.6e-13 77.4 64 67.2
Psat7g039040 Pisum sativum HOM05D003980 ORTHO05D005301 7.5e-09 64.3 42 69.0


User provided reference genes

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