Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3326 Ceratophyllum demersum HOM05D003560 ORTHO05D004500 0.0e+00 1392.9 721 100.0
CDE02G1528 Ceratophyllum demersum HOM05D003560 ORTHO05D004500 0.0e+00 1182.5 763 82.8
TAR636G2626 Trochodendron aralioides HOM05D003560 ORTHO05D004500 5.5e-229 798.1 781 56.3
TAR625G0571 Trochodendron aralioides HOM05D003560 ORTHO05D004500 1.5e-221 773.5 781 54.9
Nn2g14025 Nelumbo nucifera HOM05D003560 ORTHO05D004500 3.0e-211 739.2 777 53.8
PSO063G7271 Papaver somniferum HOM05D003560 ORTHO05D004500 6.8e-211 738.0 778 53.2
PSO782G3416 Papaver somniferum HOM05D003560 ORTHO05D004500 3.4e-210 735.7 778 53.2
Aqoxy7G03346 Aquilegia oxysepala HOM05D003560 ORTHO05D004500 2.3e-206 723.0 775 52.4
Gohir.A05G008100 Gossypium hirsutum HOM05D003560 ORTHO05D004500 1.1e-205 720.7 780 52.3
Gorai.009G009100 Gossypium raimondii HOM05D003560 ORTHO05D004500 1.9e-205 719.9 780 52.3
Atru.chr7.14 Acer truncatum HOM05D003560 ORTHO05D004500 3.6e-204 715.7 781 52.0
Gohir.D05G008900 Gossypium hirsutum HOM05D003560 ORTHO05D004500 4.7e-204 715.3 780 52.2
Duzib168G0378 Durio zibethinus HOM05D003560 ORTHO05D004500 3.7e-201 705.7 782 51.0
Thecc.09G153600 Theobroma cacao HOM05D003560 ORTHO05D004500 4.9e-201 705.3 779 51.7
Prupe.1G102400 Prunus persica HOM05D003560 ORTHO05D004500 4.1e-200 702.2 782 50.8
MD04G1049500 Malus domestica HOM05D003560 ORTHO05D004500 2.0e-199 699.9 781 50.8
Haze_19142 Corylus avellana HOM05D003560 ORTHO05D004500 6.6e-198 694.9 780 50.5
CiPaw.16G106900 Carya illinoinensis HOM05D003560 ORTHO05D004500 1.1e-197 694.1 779 50.7
Ciclev10007284m.g Citrus clementina HOM05D003560 ORTHO05D004500 2.5e-197 693.0 782 50.8
Manes.06G031700 Manihot esculenta HOM05D003560 ORTHO05D004500 3.3e-197 692.6 782 51.5
CANSAT11G0384 Cannabis sativa HOM05D003560 ORTHO05D004500 4.3e-197 692.2 769 51.9
FAN12G4167 Fragaria x ananassa HOM05D003560 ORTHO05D004500 5.6e-197 691.8 779 51.0
FAN22G1868 Fragaria x ananassa HOM05D003560 ORTHO05D004500 9.5e-197 691.0 779 50.6
Hma1.2p1_1084F.1_g255280 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 1.2e-196 690.6 766 52.1
FvH4_4g10150 Fragaria vesca HOM05D003560 ORTHO05D004500 2.8e-196 689.5 779 50.8
Dinv42820 Davidia involucrata HOM05D003560 ORTHO05D004500 3.6e-196 689.1 780 51.3
Dinv43280 Davidia involucrata HOM05D003560 ORTHO05D004500 3.6e-196 689.1 780 51.3
FAN12G2950 Fragaria x ananassa HOM05D003560 ORTHO05D004500 3.6e-196 689.1 779 50.8
FAN17G2275 Fragaria x ananassa HOM05D003560 ORTHO05D004500 2.3e-195 686.4 779 50.6
QL02p094176 Quercus lobata HOM05D003560 ORTHO05D004500 2.0e-194 683.3 772 51.0
vmacro13051 Vaccinium macrocarpon HOM05D003560 ORTHO05D004500 2.0e-194 683.3 756 52.5
Potri.018G103000 Populus trichocarpa HOM05D003560 ORTHO05D004500 7.5e-194 681.4 781 50.8
FAN07G0247 Fragaria x ananassa HOM05D003560 ORTHO05D004500 9.8e-194 681.0 799 49.6
Cpa.g.sc199.20 Carica papaya HOM05D003560 ORTHO05D004500 2.9e-193 679.5 775 50.2
RcHm_v2.0_Chr4g0405611 Rosa chinensis HOM05D003560 ORTHO05D004500 2.9e-193 679.5 781 49.9
GSVIVG01023682001 Vitis vinifera HOM05D003560 ORTHO05D004500 4.9e-193 678.7 722 54.0
Cfa020786 Carpinus fangiana HOM05D003560 ORTHO05D004500 7.0e-192 674.9 782 49.7
Rhsim01G0023800 Rhododendron simsii HOM05D003560 ORTHO05D004500 1.6e-191 673.7 756 52.4
COL.COLO4_05033 Corchorus olitorius HOM05D003560 ORTHO05D004500 6.0e-191 671.8 759 50.1
Dinv41343 Davidia involucrata HOM05D003560 ORTHO05D004500 6.0e-191 671.8 779 51.0
Lj4g0007617 Lotus japonicus HOM05D003560 ORTHO05D004500 7.8e-191 671.4 770 50.3
Hma1.2p1_0222F.1_g093890 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 1.3e-190 670.6 808 49.4
MD13G1257100 Malus domestica HOM05D003560 ORTHO05D004500 3.9e-190 669.1 782 49.2
Sabra06G0137800 Salix brachista HOM05D003560 ORTHO05D004500 2.5e-189 666.4 781 50.4
Duzib187G1514 Durio zibethinus HOM05D003560 ORTHO05D004500 9.5e-189 664.5 782 49.4
AUR62028380 Chenopodium quinoa HOM05D003560 ORTHO05D004500 1.4e-187 660.6 767 51.4
Thhalv10024256m.g Eutrema salsugineum HOM05D003560 ORTHO05D004500 5.2e-187 658.7 775 48.8
ATR0749G018 Amborella trichopoda HOM05D003560 ORTHO05D004500 5.8e-186 655.2 783 50.7
Cc06_g14510 Coffea canephora HOM05D003560 ORTHO05D004500 9.8e-186 654.4 777 49.4
Nn8g40053 Nelumbo nucifera HOM05D003560 ORTHO05D004500 8.3e-185 651.4 685 53.4
Sp7g28660 Schrenkiella parvula HOM05D003560 ORTHO05D004500 1.1e-184 651.0 766 48.8
EL10Ac8g18909 Beta vulgaris HOM05D003560 ORTHO05D004500 1.9e-184 650.2 767 50.3
Glyma.02G206500 Glycine max HOM05D003560 ORTHO05D004500 3.2e-184 649.4 780 48.3
Glyma.17G071400 Glycine max HOM05D003560 ORTHO05D004500 4.1e-184 649.0 782 48.7
Ca_21152_v3 Cicer arietinum L. HOM05D003560 ORTHO05D004500 1.6e-183 647.1 773 48.6
Lalb_Chr13g0300691 Lupinus albus HOM05D003560 ORTHO05D004500 2.1e-183 646.7 770 50.0
Lalb_Chr12g0198821 Lupinus albus HOM05D003560 ORTHO05D004500 2.7e-183 646.4 777 48.5
Nitab4.5_0006744g0010 Nicotiana tabacum HOM05D003560 ORTHO05D004500 2.7e-183 646.4 773 48.8
Carub.0007s0981 Capsella rubella HOM05D003560 ORTHO05D004500 1.0e-182 644.4 773 48.5
Nitab4.5_0001036g0120 Nicotiana tabacum HOM05D003560 ORTHO05D004500 1.7e-182 643.7 769 48.6
THA.LOC104815517 Tarenaya hassleriana HOM05D003560 ORTHO05D004500 1.7e-182 643.7 778 48.5
TPR.G24844 Trifolium pratense HOM05D003560 ORTHO05D004500 1.7e-182 643.7 773 48.1
Medtr4g130370 Medicago truncatula HOM05D003560 ORTHO05D004500 3.9e-182 642.5 777 48.0
THA.LOC104803909 Tarenaya hassleriana HOM05D003560 ORTHO05D004500 3.9e-182 642.5 772 49.7
C01p08140 Brassica napus HOM05D003560 ORTHO05D004500 5.1e-182 642.1 761 49.0
Duzib150G1559 Durio zibethinus HOM05D003560 ORTHO05D004500 5.1e-182 642.1 781 48.4
CARHR238630 Cardamine hirsuta HOM05D003560 ORTHO05D004500 8.6e-182 641.3 777 48.4
A01p07380 Brassica napus HOM05D003560 ORTHO05D004500 1.9e-181 640.2 768 49.1
PGSC0003DMG400011153 Solanum tuberosum HOM05D003560 ORTHO05D004500 2.5e-181 639.8 780 48.8
Ah.09g228690 Amaranthus hybridus HOM05D003560 ORTHO05D004500 3.3e-181 639.4 765 49.5
BraA01t00687Z Brassica rapa HOM05D003560 ORTHO05D004500 4.3e-181 639.0 768 49.0
BcaC09g51868 Brassica carinata HOM05D003560 ORTHO05D004500 7.3e-181 638.3 761 49.0
BolC1t00801H Brassica oleracea HOM05D003560 ORTHO05D004500 7.3e-181 638.3 761 49.0
Phvul.003G153800 Phaseolus vulgaris HOM05D003560 ORTHO05D004500 7.3e-181 638.3 779 47.9
CAN.G1190.4 Capsicum annuum HOM05D003560 ORTHO05D004500 2.1e-180 636.7 774 48.2
Eucgr.C00241 Eucalyptus grandis HOM05D003560 ORTHO05D004500 2.1e-180 636.7 782 48.1
Sopen07g002100 Solanum pennellii HOM05D003560 ORTHO05D004500 2.8e-180 636.3 780 48.6
CiPaw.15G164500 Carya illinoinensis HOM05D003560 ORTHO05D004500 3.6e-180 636.0 781 48.0
Aa31LG2G19610 Aethionema arabicum HOM05D003560 ORTHO05D004500 4.7e-180 635.6 768 48.7
VMungo1215G0464 Vigna mungo HOM05D003560 ORTHO05D004500 4.7e-180 635.6 773 48.3
Sed0017470 Sechium edule HOM05D003560 ORTHO05D004500 1.4e-179 634.0 779 49.3
DCAR_009892 Daucus carota HOM05D003560 ORTHO05D004500 1.8e-179 633.6 776 49.4
CSS0046771 Camellia sinensis var. sinensis HOM05D003560 ORTHO05D004500 4.0e-179 632.5 777 50.2
BcaNung01560 Brassica carinata HOM05D003560 ORTHO05D004500 1.2e-178 630.9 761 47.4
BcaNung04829 Brassica carinata HOM05D003560 ORTHO05D004500 2.0e-178 630.2 770 48.1
Sc14g0000980 Simmondsia chinensis HOM05D003560 ORTHO05D004500 2.0e-178 630.2 745 49.3
ClCG02G014310 Citrullus lanatus HOM05D003560 ORTHO05D004500 2.6e-178 629.8 780 49.0
arahy.Tifrunner.gnm1.ann1.752C0V Arachis hypogaea HOM05D003560 ORTHO05D004500 3.4e-178 629.4 780 48.1
Psat7g006640 Pisum sativum HOM05D003560 ORTHO05D004500 3.4e-178 629.4 773 47.1
AT4G30790 Arabidopsis thaliana HOM05D003560 ORTHO05D004500 4.4e-178 629.0 778 47.7
Solyc07g005970.3 Solanum lycopersicum HOM05D003560 ORTHO05D004500 7.6e-178 628.2 779 48.1
Migut.J01389 Erythranthe guttata HOM05D003560 ORTHO05D004500 9.9e-178 627.9 732 49.3
Sed0019076 Sechium edule HOM05D003560 ORTHO05D004500 2.2e-177 626.7 781 48.8
Actinidia20936 Actinidia chinensis HOM05D003560 ORTHO05D004500 6.4e-177 625.2 756 49.7
TWI32G0440 Tripterygium wilfordii HOM05D003560 ORTHO05D004500 1.4e-176 624.0 779 49.0
Hund08956 Selenicereus undatus HOM05D003560 ORTHO05D004500 5.4e-176 622.1 766 48.3
C07p58220 Brassica napus HOM05D003560 ORTHO05D004500 1.2e-175 620.9 748 48.1
Potri.006G180800 Populus trichocarpa HOM05D003560 ORTHO05D004500 1.2e-175 620.9 781 48.1
Peaxi162Scf00563g00417 Petunia axillaris HOM05D003560 ORTHO05D004500 1.6e-175 620.5 778 46.9
vmacro06053 Vaccinium macrocarpon HOM05D003560 ORTHO05D004500 3.5e-175 619.4 767 49.4
MELO3C004116.2 Cucumis melo HOM05D003560 ORTHO05D004500 6.0e-175 618.6 781 48.1
BolC7t46280H Brassica oleracea HOM05D003560 ORTHO05D004500 1.7e-174 617.1 748 48.1
A03p60310 Brassica napus HOM05D003560 ORTHO05D004500 3.0e-174 616.3 768 47.1
BraA03t15073Z Brassica rapa HOM05D003560 ORTHO05D004500 3.0e-174 616.3 768 47.1
BcaNung02741 Brassica carinata HOM05D003560 ORTHO05D004500 3.9e-174 615.9 748 48.3
A08p19080 Brassica napus HOM05D003560 ORTHO05D004500 6.6e-174 615.1 763 47.8
BcaC01g01140 Brassica carinata HOM05D003560 ORTHO05D004500 1.5e-173 614.0 764 47.6
BolC3t21162H Brassica oleracea HOM05D003560 ORTHO05D004500 1.5e-173 614.0 764 47.6
CsaV3_2G007690 Cucumis sativus L. HOM05D003560 ORTHO05D004500 2.5e-173 613.2 781 47.8
PGR102G2861 Punica granatum HOM05D003560 ORTHO05D004500 3.3e-173 612.8 776 47.6
C03p88520 Brassica napus HOM05D003560 ORTHO05D004500 2.1e-172 610.1 764 47.4
SalBow1G5562 Salvia bowleyana HOM05D003560 ORTHO05D004500 8.1e-172 608.2 776 46.9
HanXRQChr10g0307611 Helianthus annuus HOM05D003560 ORTHO05D004500 5.2e-171 605.5 742 50.1
BraA08t33870Z Brassica rapa HOM05D003560 ORTHO05D004500 2.6e-170 603.2 795 46.2
HanXRQChr12g0357781 Helianthus annuus HOM05D003560 ORTHO05D004500 8.4e-169 598.2 744 48.9
TWI34G0709 Tripterygium wilfordii HOM05D003560 ORTHO05D004500 8.4e-169 598.2 773 47.2
SalBow1G1777 Salvia bowleyana HOM05D003560 ORTHO05D004500 1.9e-168 597.0 758 47.6
Lsat_1_v5_gn_5_89080 Lactuca sativa HOM05D003560 ORTHO05D004500 3.2e-168 596.3 731 49.5
MSTRG.19664 Avicennia marina HOM05D003560 ORTHO05D004500 7.1e-168 595.1 774 46.3
Lj9A721G57 Lonicera japonica HOM05D003560 ORTHO05D004500 7.1e-168 595.1 747 48.2
SGA_v2.0_scaffold265G46080 Striga asiatica HOM05D003560 ORTHO05D004500 9.3e-168 594.7 786 45.8
Rhsim03G0259200 Rhododendron simsii HOM05D003560 ORTHO05D004500 5.1e-166 589.0 766 47.1
THA.LOC104803549 Tarenaya hassleriana HOM05D003560 ORTHO05D004500 8.7e-166 588.2 774 46.3
DCAR_020090 Daucus carota HOM05D003560 ORTHO05D004500 3.3e-165 586.3 747 46.9
PGR114G0002 Punica granatum HOM05D003560 ORTHO05D004500 2.8e-164 583.2 765 45.4
PGR142G1236 Punica granatum HOM05D003560 ORTHO05D004500 2.8e-164 583.2 765 45.4
ECA234G2881 Erigeron canadensis HOM05D003560 ORTHO05D004500 3.6e-164 582.8 733 48.3
AUR62025371 Chenopodium quinoa HOM05D003560 ORTHO05D004500 1.8e-163 580.5 767 46.5
unitig_37.g12751 Utricularia gibba HOM05D003560 ORTHO05D004500 8.4e-161 571.6 765 45.4
Lsat_1_v5_gn_8_64740 Lactuca sativa HOM05D003560 ORTHO05D004500 1.4e-160 570.9 733 47.7
AL7G21340 Arabidopsis lyrata HOM05D003560 ORTHO05D004500 3.9e-158 562.8 723 46.2
ECA236G1776 Erigeron canadensis HOM05D003560 ORTHO05D004500 2.0e-154 550.4 764 44.8
Ah.14g084380 Amaranthus hybridus HOM05D003560 ORTHO05D004500 1.2e-151 541.2 722 45.0
SEGI_31223 Sequoiadendron giganteum HOM05D003560 ORTHO05D004500 7.9e-151 538.5 800 42.0
MBI14_g08698_MAGBIO Magnolia biondii HOM05D003560 ORTHO05D004500 1.6e-148 530.8 585 51.6
Os02g0179800 Oryza sativa ssp. japonica HOM05D003560 ORTHO05D004500 1.4e-147 527.7 786 44.7
HanXRQChr05g0141571 Helianthus annuus HOM05D003560 ORTHO05D004500 2.0e-146 523.9 764 44.1
Sabra18G0088600 Salix brachista HOM05D003560 ORTHO05D004500 5.8e-146 522.3 777 43.4
SGA_v2.0_scaffold45G17008 Striga asiatica HOM05D003560 ORTHO05D004500 2.7e-143 513.5 744 44.0
Zm00001eb206680 Zea mays HOM05D003560 ORTHO05D004500 2.1e-140 503.8 774 42.4
Zm00001eb233940 Zea mays HOM05D003560 ORTHO05D004500 1.1e-139 501.5 772 42.0
Pp3c19_12090 Physcomitrium patens HOM05D003560 ORTHO05D004500 2.7e-135 486.9 825 40.2
MBI14_g31376_MAGBIO Magnolia biondii HOM05D003560 ORTHO05D004500 2.8e-132 476.9 471 55.4
Pp3c22_15890 Physcomitrium patens HOM05D003560 ORTHO05D004500 5.9e-130 469.2 828 41.1
Oeu024893.2 Olea europaea HOM05D003560 ORTHO05D004500 1.1e-128 464.9 719 42.3
Hma1.2p1_0222F.1_g093876 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 1.0e-126 458.4 538 48.3
Hma1.2p1_0222F.1_g093910 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 1.0e-126 458.4 538 48.3
SMO301G0012 Selaginella moellendorffii HOM05D003560 ORTHO05D004500 1.5e-125 454.5 747 40.4
arahy.Tifrunner.gnm1.ann1.IP23DV Arachis hypogaea HOM05D003560 ORTHO05D004500 2.2e-124 450.7 521 48.9
HPP92_021904 Vanilla planifolia HOM05D003560 ORTHO05D004500 4.5e-122 443.0 702 41.2
Mapoly0041s0089 Marchantia polymorpha HOM05D003560 ORTHO05D004500 2.3e-110 404.1 795 37.5
AagrBONN_evm.TU.Sc2ySwM_344.4294 Anthoceros agrestis HOM05D003560 ORTHO05D004500 1.2e-109 401.7 816 36.9
SMO361G0185 Selaginella moellendorffii HOM05D003560 ORTHO05D004500 5.9e-106 389.4 725 39.0
SMO361G0456 Selaginella moellendorffii HOM05D003560 ORTHO05D004500 3.2e-104 383.6 730 38.4
Migut.K00302 Erythranthe guttata HOM05D003560 ORTHO05D004500 5.4e-59 233.4 264 47.3
CBR_g38482 Chara braunii HOM05D003560 ORTHO05D004500 8.1e-55 219.5 407 35.4
CBR_g55388 Chara braunii HOM05D003560 ORTHO05D004500 2.6e-53 214.5 409 34.2
Hma1.2p1_0222F.1_g093900 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 5.8e-37 160.2 147 61.2
Zm00001eb234440 Zea mays HOM05D003560 ORTHO05D004500 2.0e-29 135.2 145 55.9
Actinidia24369 Actinidia chinensis HOM05D003560 ORTHO05D004500 2.2e-28 131.7 111 58.6
vmacro06070 Vaccinium macrocarpon HOM05D003560 ORTHO05D004500 1.9e-27 128.6 212 43.4
Cre16.g651350 Chlamydomonas reinhardtii HOM05D003560 ORTHO05D004500 4.6e-26 124.0 282 30.1
PRCOL_00000855 Prasinoderma coloniale HOM05D003560 ORTHO05D004500 6.0e-26 123.6 263 30.4
MCO10G226 Micromonas commoda HOM05D003560 ORTHO05D004500 4.3e-24 117.5 243 32.5
Zm00001eb110220 Zea mays HOM05D003560 ORTHO05D004500 3.1e-22 111.3 136 52.2
Zm00001eb257740 Zea mays HOM05D003560 ORTHO05D004500 2.0e-21 108.6 135 50.4
Actinidia24368 Actinidia chinensis HOM05D003560 ORTHO05D004500 1.1e-19 102.8 120 50.8
TPR.G131 Trifolium pratense HOM05D003560 ORTHO05D004500 1.1e-19 102.8 220 34.5
Zm00001eb400070 Zea mays HOM05D003560 ORTHO05D004500 2.5e-19 101.7 104 53.8
VMungo1127G1083 Vigna mungo HOM05D003560 ORTHO05D021703 3.6e-18 97.8 120 44.2
C03p39530 Brassica napus HOM05D003560 ORTHO05D021703 3.4e-13 81.3 115 44.3
C03p39520 Brassica napus HOM05D003560 ORTHO05D021703 2.2e-12 78.6 115 42.6
C04p25460 Brassica napus HOM05D003560 ORTHO05D021703 6.5e-12 77.0 115 43.5
BolC4t24064H Brassica oleracea HOM05D003560 ORTHO05D021703 6.5e-12 77.0 115 43.5
Nn2g14361 Nelumbo nucifera HOM05D003560 ORTHO05D004500 1.1e-11 76.3 67 59.7
BcaC01g00594 Brassica carinata HOM05D003560 ORTHO05D021703 3.2e-11 74.7 115 41.7
BcaC02g10746 Brassica carinata HOM05D003560 ORTHO05D027224 4.2e-11 74.3 348 25.9
RcHm_v2.0_Chr5g0033091 Rosa chinensis HOM05D003560 ORTHO05D004500 7.9e-10 70.1 99 44.4
Lsat_1_v5_gn_4_130961 Lactuca sativa HOM05D003560 ORTHO05D232868 1.4e-06 59.3 41 63.4


User provided reference genes

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