Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3287 Ceratophyllum demersum HOM05D005497 ORTHO05D006733 3.5e-211 738.0 376 100.0
MBI15_g07765_MAGBIO Magnolia biondii HOM05D005497 ORTHO05D006733 1.4e-21 108.2 229 39.3
TAR625G1494 Trochodendron aralioides HOM05D005497 ORTHO05D006733 2.0e-17 94.4 252 35.7
Hma1.2p1_1284F.1_g272900 Hydrangea macrophylla HOM05D005497 ORTHO05D006733 7.8e-17 92.4 255 33.3
ClCG05G016330 Citrullus lanatus HOM05D005497 ORTHO05D006733 1.0e-16 92.0 225 36.0
MELO3C016964.2 Cucumis melo HOM05D005497 ORTHO05D006733 3.0e-16 90.5 226 32.7
EL10Ac2g04114 Beta vulgaris HOM05D005497 ORTHO05D006733 3.9e-16 90.1 236 34.7
Sed0001000 Sechium edule HOM05D005497 ORTHO05D006733 5.6e-15 86.3 229 32.3
Nitab4.5_0002964g0010 Nicotiana tabacum HOM05D005497 ORTHO05D006733 7.3e-15 85.9 240 33.3
Glyma.04G061200 Glycine max HOM05D005497 ORTHO05D006733 1.2e-14 85.1 257 31.9
Actinidia10518 Actinidia chinensis HOM05D005497 ORTHO05D006733 1.6e-14 84.7 268 35.4
Oeu030218.3 Olea europaea HOM05D005497 ORTHO05D006733 1.6e-14 84.7 225 34.7
Atru.chr7.2544 Acer truncatum HOM05D005497 ORTHO05D006733 2.1e-14 84.3 241 33.2
Ciclev10008815m.g Citrus clementina HOM05D005497 ORTHO05D006733 2.8e-14 84.0 239 31.4
Lj1g0009907 Lotus japonicus HOM05D005497 ORTHO05D006733 3.6e-14 83.6 239 32.6
AUR62031606 Chenopodium quinoa HOM05D005497 ORTHO05D006733 6.2e-14 82.8 233 33.0
AUR62012481 Chenopodium quinoa HOM05D005497 ORTHO05D006733 8.1e-14 82.4 230 33.5
arahy.Tifrunner.gnm1.ann1.FJBE5X Arachis hypogaea HOM05D005497 ORTHO05D006733 2.3e-13 80.9 230 32.2
arahy.Tifrunner.gnm1.ann1.F9G1S6 Arachis hypogaea HOM05D005497 ORTHO05D006733 3.1e-13 80.5 230 32.6
Cpa.g.sc127.31 Carica papaya HOM05D005497 ORTHO05D006733 5.2e-13 79.7 240 32.1
PGR044G0919 Punica granatum HOM05D005497 ORTHO05D006733 5.2e-13 79.7 227 31.7
Actinidia23103 Actinidia chinensis HOM05D005497 ORTHO05D006733 8.9e-13 79.0 241 32.4
Glyma.06G061800 Glycine max HOM05D005497 ORTHO05D006733 8.9e-13 79.0 232 32.3
Os06g0648500 Oryza sativa ssp. japonica HOM05D005497 ORTHO05D006733 1.2e-12 78.6 231 31.2
Sabra18G0021900 Salix brachista HOM05D005497 ORTHO05D006733 1.5e-12 78.2 233 34.8
vmacro11245 Vaccinium macrocarpon HOM05D005497 ORTHO05D006733 1.5e-12 78.2 235 32.8
Nn2g12349 Nelumbo nucifera HOM05D005497 ORTHO05D006733 2.0e-12 77.8 238 34.5
Potri.018G019400 Populus trichocarpa HOM05D005497 ORTHO05D006733 2.0e-12 77.8 239 33.5
HPP92_015875 Vanilla planifolia HOM05D005497 ORTHO05D004339 2.0e-12 77.8 249 31.7
Haze_21422 Corylus avellana HOM05D005497 ORTHO05D006733 2.6e-12 77.4 255 29.8
Thecc.09G016200 Theobroma cacao HOM05D005497 ORTHO05D006733 2.6e-12 77.4 258 32.2
VMungo1309G2451 Vigna mungo HOM05D005497 ORTHO05D006733 3.4e-12 77.0 239 32.6
Zm00001eb388610 Zea mays HOM05D005497 ORTHO05D006733 4.4e-12 76.6 259 29.0
Lalb_Chr08g0244421 Lupinus albus HOM05D005497 ORTHO05D006733 7.5e-12 75.9 239 32.6
Phvul.009G087300 Phaseolus vulgaris HOM05D005497 ORTHO05D006733 7.5e-12 75.9 263 31.9
Nn8g39874 Nelumbo nucifera HOM05D005497 ORTHO05D006733 9.8e-12 75.5 227 33.0
Nitab4.5_0001219g0100 Nicotiana tabacum HOM05D005497 ORTHO05D006733 9.8e-12 75.5 259 31.3
Actinidia22292 Actinidia chinensis HOM05D005497 ORTHO05D006733 1.3e-11 75.1 234 35.9
COL.COLO4_18946 Corchorus olitorius HOM05D001770 ORTHO05D001822 1.3e-11 75.1 263 31.2
Peaxi162Scf00195g00412 Petunia axillaris HOM05D005497 ORTHO05D006733 1.3e-11 75.1 228 32.5
Nn8g39876 Nelumbo nucifera HOM05D005497 ORTHO05D006733 1.7e-11 74.7 233 34.8
RcHm_v2.0_Chr6g0299451 Rosa chinensis HOM05D005497 ORTHO05D006733 1.7e-11 74.7 228 33.3
Medtr3g106030 Medicago truncatula HOM05D005497 ORTHO05D006733 2.2e-11 74.3 228 32.0
ATR0739G202 Amborella trichopoda HOM05D005497 ORTHO05D006733 2.9e-11 73.9 225 32.4
Gohir.A05G059400 Gossypium hirsutum HOM05D005497 ORTHO05D006733 2.9e-11 73.9 229 33.2
Sopen02g018670 Solanum pennellii HOM05D005497 ORTHO05D006733 2.9e-11 73.9 225 32.9
TWI32G0158 Tripterygium wilfordii HOM05D005497 ORTHO05D006733 2.9e-11 73.9 234 33.3
PGSC0003DMG400021201 Solanum tuberosum HOM05D005497 ORTHO05D006733 4.9e-11 73.2 319 28.5
MBI16_g10973_MAGBIO Magnolia biondii HOM05D005497 ORTHO05D006733 6.4e-11 72.8 243 29.2
Ca_15775_v3 Cicer arietinum L. HOM05D005497 ORTHO05D006733 8.3e-11 72.4 249 31.7
Hund19563 Selenicereus undatus HOM05D005497 ORTHO05D006733 8.3e-11 72.4 232 31.5
Gohir.D05G061500 Gossypium hirsutum HOM05D005497 ORTHO05D006733 1.1e-10 72.0 232 31.5
Manes.16G129200 Manihot esculenta HOM05D005497 ORTHO05D006733 1.1e-10 72.0 229 32.3
Solyc02g069540.3 Solanum lycopersicum HOM05D005497 ORTHO05D006733 1.4e-10 71.6 218 33.5
Gorai.010G118600 Gossypium raimondii HOM05D005497 ORTHO05D006733 1.9e-10 71.2 109 46.8
Gorai.009G062600 Gossypium raimondii HOM05D005497 ORTHO05D006733 2.4e-10 70.9 232 31.5
Gohir.A06G101600 Gossypium hirsutum HOM05D005497 ORTHO05D006733 5.4e-10 69.7 109 45.9
FAN15G1151 Fragaria x ananassa HOM05D005497 ORTHO05D006733 7.1e-10 69.3 239 32.2
Cfa013061 Carpinus fangiana HOM05D001770 ORTHO05D001822 9.2e-10 68.9 230 28.3
Migut.A00338 Erythranthe guttata HOM05D005497 ORTHO05D006733 1.2e-09 68.6 239 32.6
FAN01G0816 Fragaria x ananassa HOM05D005497 ORTHO05D006733 1.6e-09 68.2 106 45.3
MSTRG.25841 Avicennia marina HOM05D005497 ORTHO05D006733 2.1e-09 67.8 227 30.4
Eucgr.F04316 Eucalyptus grandis HOM05D005497 ORTHO05D006733 2.1e-09 67.8 208 33.7
FAN05G5083 Fragaria x ananassa HOM05D005497 ORTHO05D006733 2.7e-09 67.4 222 31.5
Gohir.D06G103600 Gossypium hirsutum HOM05D005497 ORTHO05D006733 3.5e-09 67.0 247 31.2
Manes.16G128200 Manihot esculenta HOM05D005497 ORTHO05D006733 3.5e-09 67.0 114 42.1
FAN19G2468 Fragaria x ananassa HOM05D005497 ORTHO05D006733 4.6e-09 66.6 106 44.3
FAN27G2527 Fragaria x ananassa HOM05D005497 ORTHO05D006733 4.6e-09 66.6 220 30.9
Hund30561 Selenicereus undatus HOM05D005497 ORTHO05D006733 6.0e-09 66.2 105 41.9
Rhsim02G0213400 Rhododendron simsii HOM05D005497 ORTHO05D006733 7.8e-09 65.9 227 30.8
Psat5g032840 Pisum sativum HOM05D005497 ORTHO05D006733 1.0e-08 65.5 225 30.2
PGR044G0855 Punica granatum HOM05D005497 ORTHO05D006733 1.0e-08 65.5 102 44.1
FvH4_2g41090 Fragaria vesca HOM05D005497 ORTHO05D006733 1.3e-08 65.1 226 32.3
Duzib168G1440 Durio zibethinus HOM05D005497 ORTHO05D006733 1.7e-08 64.7 254 28.7
Hund30563 Selenicereus undatus HOM05D005497 ORTHO05D006733 1.7e-08 64.7 104 41.3
TAR383G0546 Trochodendron aralioides HOM05D005497 ORTHO05D006733 2.3e-08 64.3 124 41.1
TAR626G1486 Trochodendron aralioides HOM05D005497 ORTHO05D006733 2.3e-08 64.3 223 30.0
FAN23G0278 Fragaria x ananassa HOM05D005497 ORTHO05D006733 3.0e-08 63.9 106 43.4
FAN11G1326 Fragaria x ananassa HOM05D005497 ORTHO05D006733 3.9e-08 63.5 106 43.4
FAN22G2245 Fragaria x ananassa HOM05D005497 ORTHO05D006733 3.9e-08 63.5 106 45.3
Manes.06G084700 Manihot esculenta HOM05D003672 ORTHO05D004121 5.1e-08 63.2 243 29.2
Sc23g0006400 Simmondsia chinensis HOM05D005497 ORTHO05D006733 5.1e-08 63.2 266 27.8
Aqoxy2G02176 Aquilegia oxysepala HOM05D005497 ORTHO05D006733 1.1e-07 62.0 234 28.6
Sopen03g034170 Solanum pennellii HOM05D003672 ORTHO05D004121 1.5e-07 61.6 270 27.0
Aqoxy7G03424 Aquilegia oxysepala HOM05D005497 ORTHO05D006733 2.5e-07 60.8 287 26.8
THA.LOC104799021 Tarenaya hassleriana HOM05D005497 ORTHO05D006733 2.5e-07 60.8 244 28.3
QL02p018953 Quercus lobata HOM05D005497 ORTHO05D006733 3.3e-07 60.5 281 29.2
MD08G1057500 Malus domestica HOM05D005497 ORTHO05D006733 7.3e-07 59.3 235 31.1
CARHR239720 Cardamine hirsuta HOM05D005497 ORTHO05D006733 9.5e-07 58.9 224 30.8
Os02g0795200 Oryza sativa ssp. japonica HOM05D005497 ORTHO05D006733 1.6e-06 58.2 245 29.0
Peaxi162Scf00201g00329 Petunia axillaris HOM05D003672 ORTHO05D004121 1.6e-06 58.2 261 29.1
THA.LOC104803861 Tarenaya hassleriana HOM05D005497 ORTHO05D006733 1.6e-06 58.2 224 28.6
Nitab4.5_0009401g0050 Nicotiana tabacum HOM05D003672 ORTHO05D004121 2.1e-06 57.8 261 29.1
SalBow4G2467 Salvia bowleyana HOM05D005497 ORTHO05D006733 2.1e-06 57.8 225 30.2
Sed0002350 Sechium edule HOM05D003672 ORTHO05D004121 2.1e-06 57.8 226 27.4
Carub.0007s0875 Capsella rubella HOM05D005497 ORTHO05D006733 3.6e-06 57.0 258 24.4
CAN.G675.26 Capsicum annuum HOM05D005497 ORTHO05D006733 3.6e-06 57.0 241 29.9
Nitab4.5_0001485g0140 Nicotiana tabacum HOM05D003672 ORTHO05D004121 3.6e-06 57.0 251 29.1
Sp7g29600 Schrenkiella parvula HOM05D005497 ORTHO05D006733 3.6e-06 57.0 242 28.5
C02p04730 Brassica napus HOM05D005497 ORTHO05D006733 4.7e-06 56.6 137 34.3
BcaC03g13338 Brassica carinata HOM05D001770 ORTHO05D006733 8.1e-06 55.8 147 34.0
Carub.0006s0938 Capsella rubella HOM05D005497 ORTHO05D006733 8.1e-06 55.8 105 44.8
MD15G1039900 Malus domestica HOM05D005497 ORTHO05D006733 8.1e-06 55.8 243 32.1


User provided reference genes

Program Settings