Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3202 Ceratophyllum demersum HOM05D005915 ORTHO05D007239 8.2e-53 210.3 120 100.0
RcHm_v2.0_Chr7g0221831 Rosa chinensis HOM05D005915 ORTHO05D007239 5.2e-23 111.3 97 71.1
QL02p069532 Quercus lobata HOM05D005915 ORTHO05D007239 2.6e-22 109.0 97 78.4
EL10As5g23598 Beta vulgaris HOM05D005915 ORTHO05D007239 4.4e-22 108.2 97 61.9
TWI18G1314 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 3.7e-21 105.1 108 65.7
Migut.D01097 Erythranthe guttata HOM05D005915 ORTHO05D007239 4.8e-21 104.8 98 61.2
Manes.11G064500 Manihot esculenta HOM05D005915 ORTHO05D007239 6.3e-21 104.4 97 70.1
Dinv23302 Davidia involucrata HOM05D005915 ORTHO05D007239 8.3e-21 104.0 97 60.8
COL.COLO4_26669 Corchorus olitorius HOM05D005915 ORTHO05D007239 1.4e-20 103.2 99 70.7
Nitab4.5_0001454g0070 Nicotiana tabacum HOM05D005915 ORTHO05D007239 1.4e-20 103.2 96 58.3
Solyc03g117090.3 Solanum lycopersicum HOM05D005915 ORTHO05D007239 1.4e-20 103.2 97 58.8
Sopen03g036000 Solanum pennellii HOM05D005915 ORTHO05D007239 1.4e-20 103.2 97 58.8
PGSC0003DMG400014193 Solanum tuberosum HOM05D005915 ORTHO05D007239 1.4e-20 103.2 97 59.8
arahy.Tifrunner.gnm1.ann1.DN9Y4W Arachis hypogaea HOM05D005915 ORTHO05D007239 1.8e-20 102.8 103 68.0
MSTRG.4689 Avicennia marina HOM05D005915 ORTHO05D007239 1.8e-20 102.8 108 53.7
FvH4_5g29190 Fragaria vesca HOM05D005915 ORTHO05D007239 1.8e-20 102.8 94 73.4
MD17G1221100 Malus domestica HOM05D005915 ORTHO05D007239 1.8e-20 102.8 97 73.2
arahy.Tifrunner.gnm1.ann1.2L8LZM Arachis hypogaea HOM05D005915 ORTHO05D007239 4.1e-20 101.7 102 68.6
MELO3C017835.2 Cucumis melo HOM05D005915 ORTHO05D007239 5.3e-20 101.3 98 67.3
CsaV3_4G002020 Cucumis sativus L. HOM05D005915 ORTHO05D007239 7.0e-20 100.9 98 67.3
Potri.003G180500 Populus trichocarpa HOM05D005915 ORTHO05D007239 7.0e-20 100.9 107 61.7
AUR62022762 Chenopodium quinoa HOM05D005915 ORTHO05D007239 9.1e-20 100.5 98 70.4
Nitab4.5_0009423g0020 Nicotiana tabacum HOM05D005915 ORTHO05D007239 9.1e-20 100.5 96 61.5
Gorai.006G107100 Gossypium raimondii HOM05D005915 ORTHO05D007239 1.2e-19 100.1 112 65.2
Sc12g0008470 Simmondsia chinensis HOM05D005915 ORTHO05D007239 1.6e-19 99.8 97 64.9
ClCG07G012140 Citrullus lanatus HOM05D005915 ORTHO05D007239 3.5e-19 98.6 94 67.0
Lsat_1_v5_gn_4_85741 Lactuca sativa HOM05D005915 ORTHO05D007239 3.5e-19 98.6 92 56.5
Ca_20554_v3 Cicer arietinum L. HOM05D005915 ORTHO05D007239 4.5e-19 98.2 103 54.4
Gohir.D09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 4.5e-19 98.2 111 64.9
Prupe.7G069400 Prunus persica HOM05D005915 ORTHO05D007239 4.5e-19 98.2 98 70.4
Actinidia25458 Actinidia chinensis HOM05D005915 ORTHO05D007239 5.9e-19 97.8 97 57.7
Duzib235G0368 Durio zibethinus HOM05D005915 ORTHO05D007239 5.9e-19 97.8 116 61.2
SGA_v2.0_scaffold89G27484 Striga asiatica HOM05D005915 ORTHO05D007239 5.9e-19 97.8 98 58.2
Ah.05g171200 Amaranthus hybridus HOM05D005915 ORTHO05D007239 7.7e-19 97.4 110 53.6
CiPaw.01G253100 Carya illinoinensis HOM05D005915 ORTHO05D007239 7.7e-19 97.4 96 68.8
AUR62027568 Chenopodium quinoa HOM05D005915 ORTHO05D007239 1.3e-18 96.7 97 71.1
Oeu008050.2 Olea europaea HOM05D005915 ORTHO05D007239 1.3e-18 96.7 95 58.9
unitig_736.g22803 Utricularia gibba HOM05D005915 ORTHO05D007239 1.7e-18 96.3 96 58.3
Lj3g0003301 Lotus japonicus HOM05D005915 ORTHO05D007239 2.2e-18 95.9 101 69.3
Oeu033656.3 Olea europaea HOM05D005915 ORTHO05D007239 2.2e-18 95.9 95 60.0
VMungo0331G1031 Vigna mungo HOM05D005915 ORTHO05D007239 2.2e-18 95.9 101 64.4
CSS0040460 Camellia sinensis var. sinensis HOM05D005915 ORTHO05D007239 2.9e-18 95.5 98 66.3
TAR633G0597 Trochodendron aralioides HOM05D005915 ORTHO05D007239 2.9e-18 95.5 125 45.6
Gohir.A09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 3.8e-18 95.1 100 68.0
Phvul.010G159800 Phaseolus vulgaris HOM05D005915 ORTHO05D007239 3.8e-18 95.1 101 64.4
SHI11251 Sapria himalayana HOM05D005915 ORTHO05D007239 3.8e-18 95.1 99 52.5
TPR.G17738 Trifolium pratense HOM05D005915 ORTHO05D007239 6.5e-18 94.4 111 60.4
CANSAT56G1340 Cannabis sativa HOM05D005915 ORTHO05D007239 8.5e-18 94.0 96 66.7
HanXRQChr04g0107231 Helianthus annuus HOM05D005915 ORTHO05D007239 8.5e-18 94.0 92 54.3
Sed0026009 Sechium edule HOM05D005915 ORTHO05D007239 1.1e-17 93.6 96 63.5
vmacro19042 Vaccinium macrocarpon HOM05D005915 ORTHO05D007239 1.1e-17 93.6 118 57.6
ATR1120G130 Amborella trichopoda HOM05D005915 ORTHO05D007239 1.5e-17 93.2 93 68.8
THA.LOC104812439 Tarenaya hassleriana HOM05D005915 ORTHO05D007239 1.5e-17 93.2 112 60.7
Aqoxy7G03485 Aquilegia oxysepala HOM05D005915 ORTHO05D007239 1.9e-17 92.8 98 60.2
PSO782G5373 Papaver somniferum HOM05D005915 ORTHO05D007239 1.9e-17 92.8 114 49.1
Medtr8g060830 Medicago truncatula HOM05D005915 ORTHO05D007239 2.5e-17 92.4 110 57.3
PSO339G3366 Papaver somniferum HOM05D005915 ORTHO05D007239 2.5e-17 92.4 100 55.0
HPP92_016367 Vanilla planifolia HOM05D005915 ORTHO05D007239 2.5e-17 92.4 95 61.1
Atru.chr6.915 Acer truncatum HOM05D005915 ORTHO05D007239 3.2e-17 92.0 104 63.5
ECA232G2243 Erigeron canadensis HOM05D005915 ORTHO05D007239 3.2e-17 92.0 95 54.7
Zm00001eb174980 Zea mays HOM05D005915 ORTHO05D007239 3.2e-17 92.0 103 60.2
Eucgr.J03100 Eucalyptus grandis HOM05D005915 ORTHO05D007239 4.2e-17 91.7 96 67.7
PSO063G1890 Papaver somniferum HOM05D005915 ORTHO05D007239 5.5e-17 91.3 99 52.5
Rhsim08G0207800 Rhododendron simsii HOM05D005915 ORTHO05D007239 5.5e-17 91.3 110 57.3
Ciclev10026473m.g Citrus clementina HOM05D005915 ORTHO05D007239 7.2e-17 90.9 112 56.2
Psat7g259880 Pisum sativum HOM05D005915 ORTHO05D007239 9.4e-17 90.5 109 61.5
TPR.G38763 Trifolium pratense HOM05D005915 ORTHO05D007239 1.2e-16 90.1 95 65.3
TWI12G0041 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 1.2e-16 90.1 96 60.4
Glyma.08G216900 Glycine max HOM05D005915 ORTHO05D007239 1.6e-16 89.7 101 62.4
Medtr4g006550 Medicago truncatula HOM05D005915 ORTHO05D007239 1.6e-16 89.7 110 57.3
PGR142G0337 Punica granatum HOM05D005915 ORTHO05D007239 3.6e-16 88.6 98 57.1
Thecc.06G038900 Theobroma cacao HOM05D005915 ORTHO05D007239 6.1e-16 87.8 46 87.0
Cc04_g04930 Coffea canephora HOM05D005915 ORTHO05D007239 8.0e-16 87.4 87 57.5
Nitab4.5_0004330g0010 Nicotiana tabacum HOM05D005915 ORTHO05D007239 8.0e-16 87.4 98 64.3
PGR102G1994 Punica granatum HOM05D005915 ORTHO05D007239 8.0e-16 87.4 99 61.6
Hund00452 Selenicereus undatus HOM05D005915 ORTHO05D007239 8.0e-16 87.4 129 52.7
Nn2g12284 Nelumbo nucifera HOM05D005915 ORTHO05D007239 4.0e-15 85.1 147 42.2
Sabra01G0033000 Salix brachista HOM05D005915 ORTHO05D007239 6.8e-15 84.3 117 52.1
GSVIVG01017559001 Vitis vinifera HOM05D005915 ORTHO05D007239 8.8e-15 84.0 93 68.8
Potri.001G047700 Populus trichocarpa HOM05D005915 ORTHO05D007239 3.4e-14 82.0 44 84.1
Aa31LG4G980 Aethionema arabicum HOM05D005915 ORTHO05D007239 7.5e-14 80.9 93 62.4
BcaC08g47553 Brassica carinata HOM05D005915 ORTHO05D007239 9.8e-14 80.5 99 60.6
BolC6t40396H Brassica oleracea HOM05D005915 ORTHO05D007239 9.8e-14 80.5 99 57.6
SEGI_14387 Sequoiadendron giganteum HOM05D005915 ORTHO05D007239 9.8e-14 80.5 78 56.4
AL2G40740 Arabidopsis lyrata HOM05D005915 ORTHO05D007239 1.7e-13 79.7 99 55.6
Lalb_Chr01g0012181 Lupinus albus HOM05D005915 ORTHO05D007239 2.2e-13 79.3 43 79.1
C06p53780 Brassica napus HOM05D005915 ORTHO05D007239 2.8e-13 79.0 99 59.6
AT1G80700 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 3.7e-13 78.6 99 53.5
AT1G80980 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 3.7e-13 78.6 99 53.5
A07p44990 Brassica napus HOM05D005915 ORTHO05D007239 3.7e-13 78.6 99 59.6
BraA07t32004Z Brassica rapa HOM05D005915 ORTHO05D007239 3.7e-13 78.6 99 59.6
Thhalv10019105m.g Eutrema salsugineum HOM05D005915 ORTHO05D007239 6.3e-13 77.8 99 58.6
HanXRQChr09g0274531 Helianthus annuus HOM05D005915 ORTHO05D007239 8.3e-13 77.4 41 82.9
SalBow6G5910 Salvia bowleyana HOM05D005915 ORTHO05D007239 8.3e-13 77.4 42 83.3
Sp5g35050 Schrenkiella parvula HOM05D005915 ORTHO05D007239 1.8e-12 76.3 99 58.6
BraA07t30325Z Brassica rapa HOM05D005915 ORTHO05D007239 2.4e-12 75.9 99 52.5
Os08g0278100 Oryza sativa ssp. japonica HOM05D005915 ORTHO05D007239 3.1e-12 75.5 107 50.5
BcaC08g45335 Brassica carinata HOM05D005915 ORTHO05D007239 4.1e-12 75.1 99 55.6
A07p26820 Brassica napus HOM05D005915 ORTHO05D007239 4.1e-12 75.1 101 52.5
BolC6t38110H Brassica oleracea HOM05D005915 ORTHO05D007239 4.1e-12 75.1 99 55.6
C06p29450 Brassica napus HOM05D005915 ORTHO05D007239 5.4e-12 74.7 99 57.6
BcaB02g07251 Brassica carinata HOM05D005915 ORTHO05D007239 1.2e-11 73.6 99 55.6
Carub.0002s2685 Capsella rubella HOM05D005915 ORTHO05D007239 5.9e-11 71.2 99 52.5
QL05p035112 Quercus lobata HOM05D005915 ORTHO05D007239 5.0e-10 68.2 34 91.2
FAN18G1559 Fragaria x ananassa HOM05D005915 ORTHO05D007239 6.6e-10 67.8 97 57.7
Cpa.g.sc0.147 Carica papaya HOM05D005915 ORTHO05D007239 1.1e-09 67.0 89 52.8
Pp3c9_20610 Physcomitrium patens HOM05D005915 ORTHO05D007239 1.1e-09 67.0 98 42.9
FAN08G0623 Fragaria x ananassa HOM05D005915 ORTHO05D007239 4.2e-09 65.1 77 62.3
Prupe.1G199000 Prunus persica HOM05D005915 ORTHO05D007239 5.5e-09 64.7 34 85.3
Mapoly0140s0034 Marchantia polymorpha HOM05D005915 ORTHO05D007239 3.6e-08 62.0 42 64.3
BolC3t13327H Brassica oleracea HOM05D005915 ORTHO05D007239 8.0e-08 60.8 95 43.2
Ah.05g171290 Amaranthus hybridus HOM05D005915 ORTHO05D007239 6.8e-07 57.8 70 51.4


User provided reference genes

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