Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3179 Ceratophyllum demersum HOM05D003549 ORTHO05D004223 1.9e-33 145.2 72 100.0
Rhsim12G0163400 Rhododendron simsii HOM05D003549 ORTHO05D004223 1.0e-13 79.7 73 58.9
TAR629G2438 Trochodendron aralioides HOM05D003549 ORTHO05D004223 2.9e-13 78.2 74 58.1
CiPaw.12G025200 Carya illinoinensis HOM05D003549 ORTHO05D004223 6.5e-13 77.0 73 58.9
Nn8g39923 Nelumbo nucifera HOM05D003549 ORTHO05D004223 8.5e-13 76.6 74 55.4
Aqoxy3G00995 Aquilegia oxysepala HOM05D003549 ORTHO05D004223 1.1e-12 76.3 76 57.9
TWI60G0590 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 1.1e-12 76.3 73 58.9
SalBow2G1727 Salvia bowleyana HOM05D003549 ORTHO05D004223 2.5e-12 75.1 75 61.3
Sed0001837 Sechium edule HOM05D003549 ORTHO05D004223 5.5e-12 73.9 73 54.8
SGA_v2.0_scaffold90G27958 Striga asiatica HOM05D000215 ORTHO05D003454 5.5e-12 73.9 75 56.0
BcaB05g23601 Brassica carinata HOM05D003549 ORTHO05D004223 1.6e-11 72.4 76 56.6
Nitab4.5_0000852g0140 Nicotiana tabacum HOM05D003549 ORTHO05D004223 7.9e-11 70.1 75 60.0
Nitab4.5_0003857g0060 Nicotiana tabacum HOM05D003549 ORTHO05D004223 7.9e-11 70.1 75 60.0
TWI81G0050 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 7.9e-11 70.1 75 54.7
TWI81G1057 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 7.9e-11 70.1 75 54.7
BolC2t09796H Brassica oleracea HOM05D003549 ORTHO05D004223 1.4e-10 69.3 77 54.5
TWI15G0885 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 1.4e-10 69.3 75 53.3
BcaB03g15337 Brassica carinata HOM05D003549 ORTHO05D004223 1.8e-10 68.9 76 59.2
Lalb_Chr08g0236401 Lupinus albus HOM05D003549 ORTHO05D004223 2.3e-10 68.6 74 54.1
THA.LOC109116495 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 3.0e-10 68.2 74 54.1
Ca_16195_v3 Cicer arietinum L. HOM05D003549 ORTHO05D004223 3.9e-10 67.8 74 56.8
Peaxi162Scf00535g00046 Petunia axillaris HOM05D003549 ORTHO05D004223 3.9e-10 67.8 75 58.7
Mapoly0025s0126 Marchantia polymorpha HOM05D003549 ORTHO05D004223 5.1e-10 67.4 69 52.2
Dinv33505 Davidia involucrata HOM05D003549 ORTHO05D004223 8.8e-10 66.6 74 52.7
Psat5g114160 Pisum sativum HOM05D003549 ORTHO05D004223 1.1e-09 66.2 74 54.1
RcHm_v2.0_Chr7g0193821 Rosa chinensis HOM05D003549 ORTHO05D004223 1.1e-09 66.2 72 54.2
CiPaw.11G028500 Carya illinoinensis HOM05D003549 ORTHO05D004223 1.5e-09 65.9 73 52.1
ECA232G0606 Erigeron canadensis HOM05D003549 ORTHO05D004223 1.5e-09 65.9 74 54.1
Peaxi162Scf00017g02716 Petunia axillaris HOM05D003549 ORTHO05D004223 2.0e-09 65.5 75 57.3
RcHm_v2.0_Chr7g0184521 Rosa chinensis HOM05D003549 ORTHO05D004223 2.0e-09 65.5 72 54.2
CsaV3_1G008390 Cucumis sativus L. HOM05D003549 ORTHO05D004223 3.3e-09 64.7 74 52.7
FAN04G1549 Fragaria x ananassa HOM05D003549 ORTHO05D004223 3.3e-09 64.7 72 52.8
FAN08G2999 Fragaria x ananassa HOM05D003549 ORTHO05D004223 3.3e-09 64.7 72 52.8
FAN13G2761 Fragaria x ananassa HOM05D003549 ORTHO05D004223 3.3e-09 64.7 72 52.8
Potri.017G066900 Populus trichocarpa HOM05D003549 ORTHO05D004223 3.3e-09 64.7 74 54.1
PSO063G4497 Papaver somniferum HOM05D003549 ORTHO05D004223 4.3e-09 64.3 73 53.4
PSO478G4862 Papaver somniferum HOM05D003549 ORTHO05D004223 4.3e-09 64.3 74 52.7
ClCG01G013030 Citrullus lanatus HOM05D003549 ORTHO05D004223 5.7e-09 63.9 74 52.7
Hma1.2p1_0176F.1_g077660 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 7.4e-09 63.5 74 54.1
Phvul.001G059000 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 9.7e-09 63.2 74 54.1
Duzib205G0517 Durio zibethinus HOM05D003549 ORTHO05D004223 1.3e-08 62.8 75 53.3
PSO017G2368 Papaver somniferum HOM05D003549 ORTHO05D004223 1.3e-08 62.8 74 51.4
FvH4_5g05150 Fragaria vesca HOM05D003549 ORTHO05D004223 1.7e-08 62.4 72 51.4
FAN18G4010 Fragaria x ananassa HOM05D003549 ORTHO05D004223 1.7e-08 62.4 72 51.4
HanXRQChr16g0517241 Helianthus annuus HOM05D003549 ORTHO05D004223 1.7e-08 62.4 76 53.9
Rhsim08G0170600 Rhododendron simsii HOM05D003549 ORTHO05D004223 1.7e-08 62.4 88 46.6
Solyc03g114170.3 Solanum lycopersicum HOM05D003549 ORTHO05D004223 1.7e-08 62.4 75 52.0
PGSC0003DMG400024492 Solanum tuberosum HOM05D003549 ORTHO05D004223 1.7e-08 62.4 75 52.0
A07p32720 Brassica napus HOM05D003549 ORTHO05D004223 2.2e-08 62.0 70 57.1
C06p38930 Brassica napus HOM05D003549 ORTHO05D004223 2.2e-08 62.0 70 57.1
BolC6t38985H Brassica oleracea HOM05D003549 ORTHO05D004223 2.2e-08 62.0 70 57.1
BraA07t30898Z Brassica rapa HOM05D003549 ORTHO05D004223 2.2e-08 62.0 70 57.1
Glyma.14G134200 Glycine max HOM05D003549 ORTHO05D004223 2.8e-08 61.6 74 52.7
Actinidia19094 Actinidia chinensis HOM05D003549 ORTHO05D004223 3.7e-08 61.2 74 51.4
Lj6g0023924 Lotus japonicus HOM05D003549 ORTHO05D004223 3.7e-08 61.2 74 50.0
PSO832G2372 Papaver somniferum HOM05D003549 ORTHO05D004223 3.7e-08 61.2 73 52.1
Glyma.04G181200 Glycine max HOM05D003549 ORTHO05D004223 4.8e-08 60.8 74 52.7
Sopen03g033240 Solanum pennellii HOM05D003549 ORTHO05D004223 4.8e-08 60.8 75 50.7
Lj1g0007079 Lotus japonicus HOM05D003549 ORTHO05D004223 6.3e-08 60.5 74 50.0
Glyma.06G183700 Glycine max HOM05D003549 ORTHO05D004223 1.1e-07 59.7 74 51.4
Potri.001G334600 Populus trichocarpa HOM05D003549 ORTHO05D004223 1.1e-07 59.7 69 50.7
Prupe.5G175700 Prunus persica HOM05D003549 ORTHO05D004223 1.1e-07 59.7 72 50.0
Lsat_1_v5_gn_4_74920 Lactuca sativa HOM05D003549 ORTHO05D004223 1.4e-07 59.3 76 51.3
Medtr3g078130 Medicago truncatula HOM05D003549 ORTHO05D004223 1.4e-07 59.3 74 51.4
Phvul.009G179900 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 1.4e-07 59.3 74 48.6
Hund03159 Selenicereus undatus HOM05D003549 ORTHO05D004223 1.4e-07 59.3 74 52.7
Manes.14G067300 Manihot esculenta HOM05D003549 ORTHO05D004223 1.8e-07 58.9 76 51.3
Sed0023520 Sechium edule HOM05D003549 ORTHO05D004223 1.8e-07 58.9 73 50.7
Actinidia33056 Actinidia chinensis HOM05D000215 ORTHO05D003454 2.4e-07 58.5 74 50.0
Duzib084G0774 Durio zibethinus HOM05D003549 ORTHO05D004223 2.4e-07 58.5 75 53.3
Glyma.17G198800 Glycine max HOM05D003549 ORTHO05D004223 2.4e-07 58.5 70 51.4
MD06G1177000 Malus domestica HOM05D003549 ORTHO05D004223 2.4e-07 58.5 72 48.6
arahy.Tifrunner.gnm1.ann1.G4GSC6 Arachis hypogaea HOM05D003549 ORTHO05D004223 3.1e-07 58.2 74 50.0
arahy.Tifrunner.gnm1.ann1.TT1NYY Arachis hypogaea HOM05D003549 ORTHO05D004223 3.1e-07 58.2 74 50.0
Haze_07495 Corylus avellana HOM05D003549 ORTHO05D004223 4.1e-07 57.8 74 50.0
ClCG08G009420 Citrullus lanatus HOM05D003549 ORTHO05D004223 5.3e-07 57.4 73 49.3
MELO3C026538.2 Cucumis melo HOM05D003549 ORTHO05D004223 5.3e-07 57.4 73 49.3
CsaV3_6G031560 Cucumis sativus L. HOM05D003549 ORTHO05D004223 5.3e-07 57.4 73 49.3
Dinv09155 Davidia involucrata HOM05D003549 ORTHO05D004223 5.3e-07 57.4 74 45.9
Hma1.2p1_0802F.1_g220520 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 5.3e-07 57.4 71 47.9
Sc04g0001880 Simmondsia chinensis HOM05D003549 ORTHO05D004223 5.3e-07 57.4 74 52.7
Actinidia04982 Actinidia chinensis HOM05D000215 ORTHO05D003454 9.1e-07 56.6 74 50.0
Migut.D01775 Erythranthe guttata HOM05D003549 ORTHO05D004223 9.1e-07 56.6 75 50.7
TAR622G0024 Trochodendron aralioides HOM05D003549 ORTHO05D004223 9.1e-07 56.6 74 47.3
TAR622G1417 Trochodendron aralioides HOM05D003549 ORTHO05D004223 9.1e-07 56.6 74 47.3
Cc04_g12860 Coffea canephora HOM05D003549 ORTHO05D004223 1.2e-06 56.2 76 50.0
Zm00001eb332940 Zea mays HOM05D003549 ORTHO05D004223 1.2e-06 56.2 72 48.6
Cpa.g.sc124.38 Carica papaya HOM05D003549 ORTHO05D004223 1.5e-06 55.8 75 45.3
MD14G1183200 Malus domestica HOM05D003549 ORTHO05D004223 1.5e-06 55.8 72 47.2
Sp5g19250 Schrenkiella parvula HOM05D003549 ORTHO05D004223 2.0e-06 55.5 76 51.3
ECA246G0614 Erigeron canadensis HOM05D001816 ORTHO05D002001 2.6e-06 55.1 33 72.7
THA.LOC104805767 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 2.6e-06 55.1 73 47.9
AagrBONN_evm.TU.Sc2ySwM_117.1875 Anthoceros agrestis HOM05D003549 ORTHO05D004223 3.4e-06 54.7 66 43.9
unitig_26.g9627 Utricularia gibba HOM05D000915 ORTHO05D001662 3.4e-06 54.7 72 45.8
Aa31LG2G1940 Aethionema arabicum HOM05D003549 ORTHO05D004223 4.5e-06 54.3 76 50.0
CDE10G1218 Ceratophyllum demersum HOM05D003549 ORTHO05D004223 4.5e-06 54.3 63 46.0
DCAR_021565 Daucus carota HOM05D003549 ORTHO05D004223 4.5e-06 54.3 69 53.6
Hma1.2p1_0967F.1_g242260 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 4.5e-06 54.3 81 42.0
COL.COLO4_34052 Corchorus olitorius HOM05D003549 ORTHO05D004223 5.9e-06 53.9 74 50.0
TPR.G30392 Trifolium pratense HOM05D003549 ORTHO05D004223 5.9e-06 53.9 82 43.9
Ciclev10023184m.g Citrus clementina HOM05D003549 ORTHO05D004223 7.7e-06 53.5 74 47.3
THA.LOC104823782 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 7.7e-06 53.5 75 46.7


User provided reference genes

Program Settings