Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3135 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 1.3e-249 865.9 451 100.0
CDE05G1184 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 2.0e-205 719.2 410 91.7
Nn1g07000 Nelumbo nucifera HOM05D005864 ORTHO05D006770 3.5e-88 329.7 470 48.5
GSVIVG01030622001 Vitis vinifera HOM05D005864 ORTHO05D006770 3.4e-75 286.6 466 42.5
Hma1.2p1_0613F.1_g189160 Hydrangea macrophylla HOM05D005864 ORTHO05D006770 4.4e-75 286.2 466 43.6
Dinv39688 Davidia involucrata HOM05D005864 ORTHO05D006770 9.8e-75 285.0 466 42.5
CiPaw.03G162800 Carya illinoinensis HOM05D005864 ORTHO05D006770 4.6e-64 249.6 462 40.0
ATR0794G118 Amborella trichopoda HOM05D005864 ORTHO05D006770 5.1e-63 246.1 473 39.3
Sc21g0001650 Simmondsia chinensis HOM05D005864 ORTHO05D006770 9.5e-62 241.9 474 39.9
Dinv18530 Davidia involucrata HOM05D005864 ORTHO05D006770 1.6e-61 241.1 294 49.7
TWI36G0516 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 2.1e-61 240.7 474 38.0
MELO3C018803.2 Cucumis melo HOM05D005864 ORTHO05D006770 4.7e-61 239.6 450 39.3
Phvul.011G106100 Phaseolus vulgaris HOM05D005864 ORTHO05D006770 1.4e-60 238.0 445 38.4
PSO675G8332 Papaver somniferum HOM05D005864 ORTHO05D006770 1.8e-60 237.7 446 40.6
CiPaw.04G117700 Carya illinoinensis HOM05D005864 ORTHO05D006770 4.0e-60 236.5 443 40.0
Lj3g0027429 Lotus japonicus HOM05D005864 ORTHO05D006770 4.0e-60 236.5 458 38.4
QL08p033779 Quercus lobata HOM05D005864 ORTHO05D006770 1.5e-59 234.6 467 39.2
Atru.chr6.3147 Acer truncatum HOM05D005864 ORTHO05D006770 2.6e-59 233.8 448 41.1
HPP92_002197 Vanilla planifolia HOM05D005864 ORTHO05D006770 7.5e-59 232.3 473 40.0
Lalb_Chr19g0135701 Lupinus albus HOM05D005864 ORTHO05D006770 8.3e-58 228.8 470 37.0
Actinidia12503 Actinidia chinensis HOM05D005864 ORTHO05D006770 1.4e-57 228.0 454 39.0
Psat7g195480 Pisum sativum HOM05D005864 ORTHO05D006770 1.9e-57 227.6 458 37.3
Potri.007G121700 Populus trichocarpa HOM05D005864 ORTHO05D006770 2.4e-57 227.3 470 39.1
Eucgr.K00811 Eucalyptus grandis HOM05D005864 ORTHO05D006770 7.1e-57 225.7 442 39.1
Haze_12896 Corylus avellana HOM05D005864 ORTHO05D006770 2.1e-56 224.2 484 37.4
SalBow7G0586 Salvia bowleyana HOM05D005864 ORTHO05D006770 2.7e-56 223.8 467 38.5
TWI75G1887 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 2.7e-56 223.8 401 39.4
arahy.Tifrunner.gnm1.ann1.UG5YAZ Arachis hypogaea HOM05D005864 ORTHO05D006770 3.5e-56 223.4 514 35.8
Thecc.02G162100 Theobroma cacao HOM05D005864 ORTHO05D006770 1.0e-55 221.9 446 39.7
Medtr4g046697 Medicago truncatula HOM05D005864 ORTHO05D006770 3.0e-55 220.3 461 37.7
CsaV3_7G003760 Cucumis sativus L. HOM05D005864 ORTHO05D006770 1.1e-54 218.4 442 36.4
Aqoxy4G02070 Aquilegia oxysepala HOM05D005864 ORTHO05D006770 1.5e-54 218.0 469 35.8
arahy.Tifrunner.gnm1.ann1.VAE2IM Arachis hypogaea HOM05D005864 ORTHO05D006770 1.9e-54 217.6 513 35.7
FvH4_6g43530 Fragaria vesca HOM05D005864 ORTHO05D006770 3.3e-54 216.9 440 38.4
Zm00001eb207650 Zea mays HOM05D005864 ORTHO05D006770 5.6e-54 216.1 435 37.5
Glyma.06G306800 Glycine max HOM05D005864 ORTHO05D006770 4.7e-53 213.0 446 35.7
PSO541G3214 Papaver somniferum HOM05D005864 ORTHO05D006770 3.1e-52 210.3 489 35.0
Nitab4.5_0000631g0060 Nicotiana tabacum HOM05D005864 ORTHO05D006770 4.0e-52 209.9 357 42.3
MSTRG.6547 Avicennia marina HOM05D005864 ORTHO05D006770 6.8e-52 209.1 469 39.4
VMungo1127G2082 Vigna mungo HOM05D005864 ORTHO05D006770 8.9e-52 208.8 444 35.8
Nitab4.5_0006207g0020 Nicotiana tabacum HOM05D005864 ORTHO05D006770 1.5e-51 208.0 476 37.4
TAR624G1226 Trochodendron aralioides HOM05D005864 ORTHO05D006770 2.0e-51 207.6 322 43.8
ClCG02G001780 Citrullus lanatus HOM05D005864 ORTHO05D006770 4.4e-51 206.5 513 34.7
CAN.G80.20 Capsicum annuum HOM05D005864 ORTHO05D006770 2.9e-50 203.8 462 36.4
Os02g0161200 Oryza sativa ssp. japonica HOM05D005864 ORTHO05D006770 4.9e-50 203.0 443 36.1
FAN14G4164 Fragaria x ananassa HOM05D005864 ORTHO05D006770 1.9e-49 201.1 459 36.6
Prupe.3G220100 Prunus persica HOM05D005864 ORTHO05D006770 1.9e-49 201.1 452 36.1
PGR142G4274 Punica granatum HOM05D005864 ORTHO05D006770 3.2e-49 200.3 437 37.3
Solyc12g005770.3 Solanum lycopersicum HOM05D005864 ORTHO05D006770 3.2e-49 200.3 486 36.0
Eucgr.K00844 Eucalyptus grandis HOM05D005864 ORTHO05D006770 9.2e-49 198.7 323 43.0
Cpa.g.sc8.234 Carica papaya HOM05D005864 ORTHO05D006770 4.6e-48 196.4 457 37.0
Duzib052G0164 Durio zibethinus HOM05D005864 ORTHO05D006770 2.3e-47 194.1 445 36.9
Cc05_g05040 Coffea canephora HOM05D005864 ORTHO05D006770 3.0e-47 193.7 478 34.9
unitig_699.g19613 Utricularia gibba HOM05D005864 ORTHO05D006770 3.9e-47 193.4 465 36.3
SGA_v2.0_scaffold70G23416 Striga asiatica HOM05D005864 ORTHO05D006770 1.5e-46 191.4 444 36.5
Glyma.12G101400 Glycine max HOM05D005864 ORTHO05D006770 5.6e-46 189.5 449 33.4
Migut.M00396 Erythranthe guttata HOM05D005864 ORTHO05D006770 1.1e-44 185.3 446 34.5
FAN05G0568 Fragaria x ananassa HOM05D005864 ORTHO05D006770 3.1e-44 183.7 441 36.1
SHI10272 Sapria himalayana HOM05D005864 ORTHO05D006770 4.4e-43 179.9 403 38.5
Oeu041940.1 Olea europaea HOM05D005864 ORTHO05D006770 2.2e-42 177.6 562 33.1
Sopen12g001690 Solanum pennellii HOM05D005864 ORTHO05D006770 2.2e-42 177.6 474 34.4
THA.LOC104809073 Tarenaya hassleriana HOM05D005864 ORTHO05D006770 2.2e-42 177.6 411 35.0
HanXRQChr07g0191611 Helianthus annuus HOM05D005864 ORTHO05D006770 4.9e-42 176.4 495 34.3
FAN09G3055 Fragaria x ananassa HOM05D005864 ORTHO05D006770 1.1e-41 175.3 460 35.2
Gohir.A03G163800 Gossypium hirsutum HOM05D005864 ORTHO05D006770 1.9e-41 174.5 447 33.3
Lsat_1_v5_gn_3_43700 Lactuca sativa HOM05D005864 ORTHO05D006770 1.9e-41 174.5 410 36.6
Ciclev10015598m.g Citrus clementina HOM05D005864 ORTHO05D006770 3.2e-41 173.7 391 36.6
Peaxi162Scf00012g03212 Petunia axillaris HOM05D005864 ORTHO05D006770 1.6e-40 171.4 471 34.6
RcHm_v2.0_Chr2g0160051 Rosa chinensis HOM05D005864 ORTHO05D006770 1.0e-39 168.7 218 45.4
Sed0014520 Sechium edule HOM05D005864 ORTHO05D006770 6.6e-39 166.0 375 37.3
Gohir.D02G187200 Gossypium hirsutum HOM05D005864 ORTHO05D006770 8.7e-39 165.6 437 34.6
Manes.12G077600 Manihot esculenta HOM05D005864 ORTHO05D006770 8.7e-39 165.6 424 34.2
Sp3g19810 Schrenkiella parvula HOM05D005864 ORTHO05D006770 7.3e-38 162.5 463 31.5
Ca_19101_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 1.6e-37 161.4 420 34.8
Sed0020795 Sechium edule HOM05D005864 ORTHO05D006770 1.4e-36 158.3 451 33.0
TAR626G1271 Trochodendron aralioides HOM05D005864 ORTHO05D006770 1.8e-36 157.9 145 61.4
Thhalv10020800m.g Eutrema salsugineum HOM05D005864 ORTHO05D006770 1.2e-35 155.2 438 32.0
CARHR097800 Cardamine hirsuta HOM05D005864 ORTHO05D006770 1.5e-35 154.8 446 31.6
Aa31LG8G8400 Aethionema arabicum HOM05D005864 ORTHO05D006770 4.5e-35 153.3 460 31.3
BcaB04g20556 Brassica carinata HOM05D005864 ORTHO05D006770 2.9e-34 150.6 439 32.1
AL3G35960 Arabidopsis lyrata HOM05D005864 ORTHO05D006770 3.2e-33 147.1 282 34.8
BcaC09g49121 Brassica carinata HOM05D005864 ORTHO05D006770 5.4e-33 146.4 440 31.1
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-32 145.2 529 29.5
SEGI_09449 Sequoiadendron giganteum HOM05D005864 ORTHO05D006770 1.6e-32 144.8 420 34.3
AT3G21810 Arabidopsis thaliana HOM05D005864 ORTHO05D006770 2.1e-32 144.4 424 30.7
unitig_85.g27303 Utricularia gibba HOM05D005864 ORTHO05D006770 4.6e-32 143.3 451 32.4
BolC1t04192H Brassica oleracea HOM05D005864 ORTHO05D006770 7.9e-32 142.5 440 30.9
A01p33130 Brassica napus HOM05D005864 ORTHO05D006770 1.8e-31 141.4 422 31.5
Sabra07G0098400 Salix brachista HOM05D005864 ORTHO05D006770 3.3e-30 137.1 429 32.9
Rhsim06G0158200 Rhododendron simsii HOM05D005864 ORTHO05D006770 8.1e-29 132.5 473 32.6
FAN02G2067 Fragaria x ananassa HOM05D005864 ORTHO05D006770 2.0e-27 127.9 402 33.8
Zm00001eb273610 Zea mays HOM05D005864 ORTHO05D006770 5.8e-27 126.3 257 38.1
AUR62025062 Chenopodium quinoa HOM05D005864 ORTHO05D006770 7.6e-27 125.9 535 27.3
PGSC0003DMG401024331 Solanum tuberosum HOM05D005864 ORTHO05D006770 2.2e-26 124.4 426 30.8
TPR.G19040 Trifolium pratense HOM05D005864 ORTHO05D006770 8.4e-26 122.5 421 30.9
Mapoly0099s0053 Marchantia polymorpha HOM05D005864 ORTHO05D006770 1.2e-24 118.6 259 38.2
EL10Ac9g20653 Beta vulgaris HOM05D005864 ORTHO05D006770 3.5e-24 117.1 434 27.6
vmacro12226 Vaccinium macrocarpon HOM05D005864 ORTHO05D006770 4.6e-24 116.7 521 29.2
COL.COLO4_12982 Corchorus olitorius HOM05D005864 ORTHO05D006770 7.9e-24 115.9 405 32.3
BraA01t03436Z Brassica rapa HOM05D005864 ORTHO05D006770 1.0e-23 115.5 430 30.2
AUR62037142 Chenopodium quinoa HOM05D005864 ORTHO05D006770 1.3e-23 115.2 411 30.7
FAN09G4739 Fragaria x ananassa HOM05D005864 ORTHO05D006770 6.9e-20 102.8 96 58.3
Pp3c11_20880 Physcomitrium patens HOM05D005864 ORTHO05D006770 6.9e-20 102.8 254 35.4
C01p42370 Brassica napus HOM05D005864 ORTHO05D006770 9.0e-20 102.4 460 26.7
TAR626G0331 Trochodendron aralioides HOM05D005864 ORTHO05D006770 1.9e-17 94.7 84 61.9
MD09G1105200 Malus domestica HOM05D005864 ORTHO05D006770 3.2e-17 94.0 405 29.1
Actinidia32077 Actinidia chinensis HOM05D005864 ORTHO05D006770 5.5e-17 93.2 349 28.1
Gorai.005G209600 Gossypium raimondii HOM05D005864 ORTHO05D006770 3.5e-16 90.5 340 28.8
CDE05G1677 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 7.9e-16 89.4 49 85.7
Ah.01g003700 Amaranthus hybridus HOM05D005864 ORTHO05D006770 3.0e-15 87.4 412 27.7
DCAR_021187 Daucus carota HOM05D005864 ORTHO05D006770 3.0e-15 87.4 365 29.0
Zm00001eb225260 Zea mays HOM05D005864 ORTHO05D006770 1.5e-14 85.1 147 35.4
Pp3c7_5470 Physcomitrium patens HOM05D005864 ORTHO05D006770 3.3e-14 84.0 263 31.2
AagrBONN_evm.TU.Sc2ySwM_369.130 Anthoceros agrestis HOM05D005864 ORTHO05D006770 7.4e-14 82.8 222 33.3
CSS0029042 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 1.6e-13 81.6 180 35.6
Carub.0003s2189 Capsella rubella HOM05D005864 ORTHO05D006770 1.6e-13 81.6 384 27.9
TAR626G0200 Trochodendron aralioides HOM05D005864 ORTHO05D006770 4.5e-11 73.6 155 38.1
TAR375G0046 Trochodendron aralioides HOM05D005864 ORTHO05D006770 1.9e-09 68.2 49 65.3
TAR372G0002 Trochodendron aralioides HOM05D005864 ORTHO05D006770 4.2e-09 67.0 49 65.3
TAR353G0003 Trochodendron aralioides HOM05D005864 ORTHO05D006770 1.8e-07 61.6 46 63.0
SMO356G0193 Selaginella moellendorffii HOM05D005864 ORTHO05D006770 7.4e-06 56.2 231 29.0


User provided reference genes

Program Settings