Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3104 Ceratophyllum demersum HOM05D005761 ORTHO05D007286 2.3e-96 355.5 177 100.0
PSO063G2446 Papaver somniferum HOM05D005761 ORTHO05D007286 1.5e-66 256.5 154 79.9
PSO170G4248 Papaver somniferum HOM05D005761 ORTHO05D007286 3.3e-66 255.4 154 78.6
Nn2g11672 Nelumbo nucifera HOM05D005761 ORTHO05D007286 5.6e-66 254.6 149 81.2
Sc12g0009490 Simmondsia chinensis HOM05D005761 ORTHO05D007286 3.6e-65 251.9 146 82.2
Eucgr.F03043 Eucalyptus grandis HOM05D005761 ORTHO05D007286 1.4e-64 250.0 146 80.1
COL.COLO4_30441 Corchorus olitorius HOM05D005761 ORTHO05D007286 1.8e-64 249.6 153 79.1
Hma1.2p1_1195F.1_g265890 Hydrangea macrophylla HOM05D005761 ORTHO05D007286 3.1e-64 248.8 153 77.8
Lj3g0012819 Lotus japonicus HOM05D005761 ORTHO05D007286 4.0e-64 248.4 148 79.1
Zm00001eb237310 Zea mays HOM05D005761 ORTHO05D007286 5.2e-64 248.1 145 80.0
arahy.Tifrunner.gnm1.ann1.IDML3X Arachis hypogaea HOM05D005761 ORTHO05D007286 8.9e-64 247.3 148 79.1
Dinv38013 Davidia involucrata HOM05D005761 ORTHO05D007286 8.9e-64 247.3 153 75.8
Duzib192G1004 Durio zibethinus HOM05D005761 ORTHO05D007286 8.9e-64 247.3 153 77.1
Gohir.A05G132200 Gossypium hirsutum HOM05D005761 ORTHO05D007286 8.9e-64 247.3 153 77.8
Nn3g18106 Nelumbo nucifera HOM05D005761 ORTHO05D007286 8.9e-64 247.3 149 79.2
Cc04_g07670 Coffea canephora HOM05D005761 ORTHO05D007286 1.2e-63 246.9 143 81.1
Psat2g181000 Pisum sativum HOM05D005761 ORTHO05D007286 1.5e-63 246.5 144 79.9
Sed0000486 Sechium edule HOM05D005761 ORTHO05D007286 1.5e-63 246.5 147 78.9
CSS0019454 Camellia sinensis var. sinensis HOM05D005761 ORTHO05D007286 2.0e-63 246.1 147 78.9
CSS0045926 Camellia sinensis var. sinensis HOM05D005761 ORTHO05D007286 2.0e-63 246.1 147 78.9
CsaV3_3G005910 Cucumis sativus L. HOM05D005761 ORTHO05D007286 2.0e-63 246.1 147 77.6
Glyma.08G204400 Glycine max HOM05D005761 ORTHO05D007286 2.6e-63 245.7 148 79.7
PGR102G2101 Punica granatum HOM05D005761 ORTHO05D007286 2.6e-63 245.7 144 81.9
Gohir.D05G131700 Gossypium hirsutum HOM05D005761 ORTHO05D007286 3.4e-63 245.4 153 77.1
Gorai.009G135400 Gossypium raimondii HOM05D005761 ORTHO05D007286 3.4e-63 245.4 153 77.1
arahy.Tifrunner.gnm1.ann1.QAD112 Arachis hypogaea HOM05D005761 ORTHO05D007286 4.4e-63 245.0 148 77.7
Cpa.g.sc33.106 Carica papaya HOM05D005761 ORTHO05D007286 5.8e-63 244.6 144 80.6
Rhsim08G0224400 Rhododendron simsii HOM05D005761 ORTHO05D007286 5.8e-63 244.6 152 78.3
Thecc.06G093100 Theobroma cacao HOM05D005761 ORTHO05D007286 5.8e-63 244.6 153 76.5
EL10Ac9g22057 Beta vulgaris HOM05D005761 ORTHO05D007286 7.5e-63 244.2 144 79.2
Gohir.A10G081800 Gossypium hirsutum HOM05D005761 ORTHO05D007286 9.8e-63 243.8 152 75.7
GSVIVG01017058001 Vitis vinifera HOM05D005761 ORTHO05D007286 9.8e-63 243.8 143 79.0
Atru.chr5.1334 Acer truncatum HOM05D005761 ORTHO05D007286 1.3e-62 243.4 153 74.5
ATR0315G131 Amborella trichopoda HOM05D005761 ORTHO05D007286 1.3e-62 243.4 147 80.3
MBI01_g30861_MAGBIO Magnolia biondii HOM05D005761 ORTHO05D007286 1.3e-62 243.4 142 81.7
Gorai.011G073900 Gossypium raimondii HOM05D005761 ORTHO05D007286 2.2e-62 242.7 152 75.0
Ca_06670_v3 Cicer arietinum L. HOM05D005761 ORTHO05D007286 2.9e-62 242.3 144 79.9
ClCG09G001920 Citrullus lanatus HOM05D005761 ORTHO05D007286 2.9e-62 242.3 148 75.0
Gohir.D10G069650 Gossypium hirsutum HOM05D005761 ORTHO05D007286 2.9e-62 242.3 152 75.0
Phvul.010G148400 Phaseolus vulgaris HOM05D005761 ORTHO05D007286 2.9e-62 242.3 148 77.7
QL05p021523 Quercus lobata HOM05D005761 ORTHO05D007286 3.7e-62 241.9 147 78.9
RcHm_v2.0_Chr2g0139151 Rosa chinensis HOM05D005761 ORTHO05D007286 3.7e-62 241.9 144 77.8
vmacro18882 Vaccinium macrocarpon HOM05D005761 ORTHO05D007286 3.7e-62 241.9 151 76.8
Ah.01g005570 Amaranthus hybridus HOM05D005761 ORTHO05D001133 4.9e-62 241.5 171 71.3
MELO3C016564.2 Cucumis melo HOM05D005761 ORTHO05D007286 4.9e-62 241.5 147 75.5
Nitab4.5_0007217g0020 Nicotiana tabacum HOM05D005761 ORTHO05D007286 6.4e-62 241.1 141 80.1
TWI75G0371 Tripterygium wilfordii HOM05D005761 ORTHO05D007286 6.4e-62 241.1 147 76.2
Atru.chr5.1303 Acer truncatum HOM05D005761 ORTHO05D007286 1.1e-61 240.4 146 75.3
CiPaw.01G235200 Carya illinoinensis HOM05D005761 ORTHO05D007286 1.1e-61 240.4 147 76.9
MD17G1190700 Malus domestica HOM05D005761 ORTHO05D007286 1.1e-61 240.4 152 75.0
Prupe.6G357100 Prunus persica HOM05D005761 ORTHO05D007286 1.1e-61 240.4 144 78.5
PGR102G0188 Punica granatum HOM05D005761 ORTHO05D007286 1.1e-61 240.4 144 81.2
CAN.G438.30 Capsicum annuum HOM05D005761 ORTHO05D007286 1.4e-61 240.0 143 78.3
Nitab4.5_0001315g0120 Nicotiana tabacum HOM05D005761 ORTHO05D007286 1.4e-61 240.0 141 79.4
TWI12G1054 Tripterygium wilfordii HOM05D005761 ORTHO05D007286 1.4e-61 240.0 147 76.2
VMungo0464G1667 Vigna mungo HOM05D005761 ORTHO05D007286 1.4e-61 240.0 148 77.0
Haze_16351 Corylus avellana HOM05D005761 ORTHO05D007286 1.9e-61 239.6 155 73.5
FAN09G1691 Fragaria x ananassa HOM05D005761 ORTHO05D007286 1.9e-61 239.6 141 78.7
PGSC0003DMG401002548 Solanum tuberosum HOM05D005761 ORTHO05D007286 1.9e-61 239.6 143 78.3
SGA_v2.0_scaffold5G02550 Striga asiatica HOM05D005761 ORTHO05D007286 1.9e-61 239.6 149 76.5
Solyc03g120610.3 Solanum lycopersicum HOM05D005761 ORTHO05D007286 2.4e-61 239.2 143 77.6
Sopen00g008190 Solanum pennellii HOM05D005761 ORTHO05D007286 2.4e-61 239.2 143 77.6
MSTRG.22659 Avicennia marina HOM05D005761 ORTHO05D007286 3.2e-61 238.8 149 75.8
unitig_37.g12255 Utricularia gibba HOM05D005761 ORTHO05D007286 4.1e-61 238.4 150 75.3
Ciclev10022630m.g Citrus clementina HOM05D005761 ORTHO05D007286 5.4e-61 238.0 153 74.5
FvH4_6g31840 Fragaria vesca HOM05D005761 ORTHO05D007286 5.4e-61 238.0 141 78.0
FAN14G3194 Fragaria x ananassa HOM05D005761 ORTHO05D007286 5.4e-61 238.0 141 78.0
Manes.04G130300 Manihot esculenta HOM05D005761 ORTHO05D007286 5.4e-61 238.0 153 75.2
Migut.I00937 Erythranthe guttata HOM05D005761 ORTHO05D007286 7.1e-61 237.7 144 79.2
Lj5A57G74 Lonicera japonica HOM05D005761 ORTHO05D007286 7.1e-61 237.7 141 79.4
Lsat_1_v5_gn_4_103261 Lactuca sativa HOM05D005761 ORTHO05D007286 9.2e-61 237.3 152 72.4
Sabra01G0154700 Salix brachista HOM05D005761 ORTHO05D007286 9.2e-61 237.3 155 72.9
HanXRQChr09g0275451 Helianthus annuus HOM05D005761 ORTHO05D007286 1.2e-60 236.9 160 68.8
SGA_v2.0_scaffold80G25854 Striga asiatica HOM05D005761 ORTHO05D007286 1.2e-60 236.9 147 77.6
Nitab4.5_0006311g0030 Nicotiana tabacum HOM05D005761 ORTHO05D007286 2.1e-60 236.1 141 78.0
FAN05G4602 Fragaria x ananassa HOM05D005761 ORTHO05D007286 2.7e-60 235.7 141 78.0
Medtr5g011180 Medicago truncatula HOM05D005761 ORTHO05D007286 2.7e-60 235.7 144 77.1
Cfa014791 Carpinus fangiana HOM05D005761 ORTHO05D007286 3.5e-60 235.3 144 77.8
Potri.003G052000 Populus trichocarpa HOM05D005761 ORTHO05D007286 3.5e-60 235.3 139 78.4
TAR624G1072 Trochodendron aralioides HOM05D005761 ORTHO05D007286 3.5e-60 235.3 150 75.3
Cpa.g.sc37.42 Carica papaya HOM05D005761 ORTHO05D007286 6.0e-60 234.6 150 76.0
ClCG10G006430 Citrullus lanatus HOM05D005761 ORTHO05D007286 1.0e-59 233.8 143 74.8
Lalb_Chr25g0280001 Lupinus albus HOM05D005761 ORTHO05D007286 1.0e-59 233.8 139 79.1
Oeu000460.1 Olea europaea HOM05D005761 ORTHO05D007286 1.7e-59 233.0 143 75.5
Peaxi162Scf00015g00136 Petunia axillaris HOM05D005761 ORTHO05D007286 2.3e-59 232.6 141 78.0
Cfa002100 Carpinus fangiana HOM05D005761 ORTHO05D001133 3.0e-59 232.3 147 75.5
DCAR_016208 Daucus carota HOM05D005761 ORTHO05D007286 3.0e-59 232.3 141 75.9
Os02g0275100 Oryza sativa ssp. japonica HOM05D005761 ORTHO05D007286 3.0e-59 232.3 137 78.8
AUR62016504 Chenopodium quinoa HOM05D005761 ORTHO05D007286 3.9e-59 231.9 149 75.2
HPP92_024576 Vanilla planifolia HOM05D005761 ORTHO05D007286 5.1e-59 231.5 148 76.4
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 2.5e-58 229.2 143 74.8
Oeu059462.1 Olea europaea HOM05D005761 ORTHO05D007286 1.2e-57 226.9 165 67.9
THA.LOC104813554 Tarenaya hassleriana HOM05D005761 ORTHO05D007286 2.1e-57 226.1 147 73.5
DCAR_023065 Daucus carota HOM05D005761 ORTHO05D007286 3.6e-57 225.3 141 75.2
RcHm_v2.0_Chr2g0139101 Rosa chinensis HOM05D005761 ORTHO05D007286 3.6e-57 225.3 155 71.0
TPR.G19588 Trifolium pratense HOM05D005761 ORTHO05D007286 4.7e-57 224.9 160 67.5
Aa31LG5G21060 Aethionema arabicum HOM05D000113 ORTHO05D001108 4.0e-56 221.9 146 73.3
Carub.0001s1498 Capsella rubella HOM05D005761 ORTHO05D007286 5.2e-56 221.5 145 72.4
ECA232G2351 Erigeron canadensis HOM05D005761 ORTHO05D007286 5.2e-56 221.5 143 69.2
Peaxi162Scf00029g02413 Petunia axillaris HOM05D005761 ORTHO05D007286 1.2e-55 220.3 160 68.1
Rhsim09G0202300 Rhododendron simsii HOM05D005761 ORTHO05D007286 1.2e-55 220.3 146 74.7
CARHR015750 Cardamine hirsuta HOM05D005761 ORTHO05D007286 3.7e-54 215.3 142 72.5
Thhalv10008971m.g Eutrema salsugineum HOM05D005761 ORTHO05D007286 6.4e-54 214.5 142 71.1
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 1.1e-53 213.8 142 71.1
AL1G27310 Arabidopsis lyrata HOM05D005761 ORTHO05D007286 2.4e-53 212.6 145 70.3
Sp1g13540 Schrenkiella parvula HOM05D005761 ORTHO05D007286 3.2e-53 212.2 141 71.6
BcaC07g38774 Brassica carinata HOM05D005761 ORTHO05D007286 4.1e-53 211.8 145 69.0
A06p11220 Brassica napus HOM05D005761 ORTHO05D007286 2.7e-52 209.1 141 70.9
C05p13350 Brassica napus HOM05D005761 ORTHO05D007286 2.7e-52 209.1 141 70.9
BraA06t24302Z Brassica rapa HOM05D005761 ORTHO05D007286 2.7e-52 209.1 141 70.9
BolC5t30072H Brassica oleracea HOM05D005761 ORTHO05D007286 6.0e-52 208.0 141 70.2
AT1G15220 Arabidopsis thaliana HOM05D005761 ORTHO05D007286 7.8e-52 207.6 145 69.0
CANSAT56G0921 Cannabis sativa HOM05D005761 ORTHO05D007286 7.8e-52 207.6 149 66.4
A08p31680 Brassica napus HOM05D005761 ORTHO05D007286 6.6e-51 204.5 141 69.5
BraA08t35090Z Brassica rapa HOM05D005761 ORTHO05D007286 6.6e-51 204.5 141 69.5
C08p17060 Brassica napus HOM05D000103 ORTHO05D000049 2.5e-50 202.6 141 68.1
BolC8t49332H Brassica oleracea HOM05D005761 ORTHO05D007286 2.5e-50 202.6 141 68.1
SalBow2G2609 Salvia bowleyana HOM05D005761 ORTHO05D007286 7.3e-50 201.1 194 55.7
TAR636G0897 Trochodendron aralioides HOM05D005761 ORTHO05D007286 2.8e-49 199.1 148 65.5
Actinidia32723 Actinidia chinensis HOM05D005761 ORTHO05D007286 9.3e-45 184.1 117 76.9
Duzib160G0104 Durio zibethinus HOM05D005761 ORTHO05D007286 3.9e-43 178.7 143 63.6
SHI11001 Sapria himalayana HOM05D005761 ORTHO05D007286 3.9e-43 178.7 147 61.9
SEGI_40479 Sequoiadendron giganteum HOM05D005761 ORTHO05D007286 1.5e-42 176.8 128 64.1
Cfa014792 Carpinus fangiana HOM05D005761 ORTHO05D007286 2.4e-37 159.5 97 75.3
Glyma.07G019200 Glycine max HOM05D005761 ORTHO05D007286 2.4e-37 159.5 93 81.7
BcaC05g25451 Brassica carinata HOM05D005761 ORTHO05D007286 1.3e-35 153.7 104 70.2
Mapoly0033s0089 Marchantia polymorpha HOM05D005761 ORTHO05D007286 1.9e-34 149.8 147 50.3
Pp3c3_29950 Physcomitrium patens HOM05D005761 ORTHO05D007286 5.6e-34 148.3 147 52.4
HanXRQChr05g0136521 Helianthus annuus HOM05D005761 ORTHO05D007286 3.6e-33 145.6 93 69.9
Sed0020064 Sechium edule HOM05D005761 ORTHO05D007286 5.4e-29 131.7 98 65.3
HanXRQChr10g0301331 Helianthus annuus HOM05D005761 ORTHO05D007286 1.6e-28 130.2 87 69.0
CBR_g32010 Chara braunii HOM05D005761 ORTHO05D007286 3.0e-27 125.9 150 45.3
Sopen03g039470 Solanum pennellii HOM05D005761 ORTHO05D007286 2.9e-22 109.4 60 80.0
HanXRQChr11g0333491 Helianthus annuus HOM05D005761 ORTHO05D007286 3.2e-21 105.9 114 50.0
HanXRQChr08g0232791 Helianthus annuus HOM05D005761 ORTHO05D007286 2.3e-19 99.8 114 47.4
Rhsim08G0224100 Rhododendron simsii HOM05D000414 ORTHO05D000276 4.2e-13 79.0 50 74.0
Rhsim08G0203300 Rhododendron simsii HOM05D005761 ORTHO05D007286 2.7e-12 76.3 47 74.5


User provided reference genes

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