Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3052 Ceratophyllum demersum HOM05D006878 ORTHO05D008579 2.1e-79 298.9 147 100.0
CDE05G3687 Ceratophyllum demersum HOM05D000160 ORTHO05D000496 1.2e-50 203.4 125 82.4
Cfa007222 Carpinus fangiana HOM05D006878 ORTHO05D008579 2.8e-23 112.5 112 54.5
MBI07_g39449_MAGBIO Magnolia biondii HOM05D006878 ORTHO05D008579 6.3e-23 111.3 118 49.2
Lsat_1_v5_gn_2_93161 Lactuca sativa HOM05D006878 ORTHO05D008579 1.1e-22 110.5 114 50.9
TAR629G1805 Trochodendron aralioides HOM05D006878 ORTHO05D008579 1.4e-22 110.2 123 51.2
Peaxi162Scf00420g00554 Petunia axillaris HOM05D006878 ORTHO05D008579 3.1e-22 109.0 123 50.4
Thecc.04G038000 Theobroma cacao HOM05D006878 ORTHO05D008579 3.1e-22 109.0 111 51.4
MD09G1010100 Malus domestica HOM05D006878 ORTHO05D008579 4.1e-22 108.6 119 49.6
Rhsim08G0042400 Rhododendron simsii HOM05D006878 ORTHO05D008579 4.1e-22 108.6 122 50.0
Ca_22814_v3 Cicer arietinum L. HOM05D006878 ORTHO05D008579 5.4e-22 108.2 117 50.4
Ciclev10016370m.g Citrus clementina HOM05D006878 ORTHO05D008579 5.4e-22 108.2 112 51.8
Prupe.3G307100 Prunus persica HOM05D006878 ORTHO05D008579 7.0e-22 107.8 112 51.8
QL02p071231 Quercus lobata HOM05D006878 ORTHO05D008579 7.0e-22 107.8 112 56.2
SalBow7G1076 Salvia bowleyana HOM05D006878 ORTHO05D008579 9.1e-22 107.5 111 50.5
vmacro18351 Vaccinium macrocarpon HOM05D006878 ORTHO05D008579 1.2e-21 107.1 112 51.8
ATR0561G206 Amborella trichopoda HOM05D006878 ORTHO05D008579 1.6e-21 106.7 141 46.1
TPR.G38297 Trifolium pratense HOM05D006878 ORTHO05D008579 1.6e-21 106.7 117 47.9
GSVIVG01033083001 Vitis vinifera HOM05D006878 ORTHO05D008579 2.0e-21 106.3 110 50.0
COL.COLO4_13265 Corchorus olitorius HOM05D006878 ORTHO05D008579 2.7e-21 105.9 110 48.2
TWI34G0743 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 2.7e-21 105.9 130 43.8
TWI34G1534 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 2.7e-21 105.9 128 43.0
TAR371G0275 Trochodendron aralioides HOM05D006878 ORTHO05D008579 2.7e-21 105.9 117 49.6
TAR629G1038 Trochodendron aralioides HOM05D006878 ORTHO05D008579 2.7e-21 105.9 111 52.3
ClCG11G007130 Citrullus lanatus HOM05D006878 ORTHO05D008579 3.5e-21 105.5 112 50.9
Cc07_g00890 Coffea canephora HOM05D006878 ORTHO05D008579 3.5e-21 105.5 119 48.7
Sed0002550 Sechium edule HOM05D006878 ORTHO05D008579 3.5e-21 105.5 115 52.2
CSS0033487 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 4.5e-21 105.1 120 48.3
Carub.0006s1234 Capsella rubella HOM05D006878 ORTHO05D008579 4.5e-21 105.1 114 49.1
Dinv33333 Davidia involucrata HOM05D006878 ORTHO05D008579 4.5e-21 105.1 122 46.7
Thhalv10014409m.g Eutrema salsugineum HOM05D006878 ORTHO05D008579 4.5e-21 105.1 114 49.1
SGA_v2.0_scaffold47G17597 Striga asiatica HOM05D006878 ORTHO05D008579 4.5e-21 105.1 111 49.5
Aqoxy5G03335 Aquilegia oxysepala HOM05D006878 ORTHO05D008579 5.9e-21 104.8 111 51.4
Haze_14883 Corylus avellana HOM05D006878 ORTHO05D008579 5.9e-21 104.8 108 53.7
Lalb_Chr14g0363461 Lupinus albus HOM05D006878 ORTHO05D008579 5.9e-21 104.8 122 49.2
Actinidia05902 Actinidia chinensis HOM05D006878 ORTHO05D008579 1.0e-20 104.0 124 47.6
Gohir.D07G235800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 1.0e-20 104.0 110 50.0
Gorai.001G271700 Gossypium raimondii HOM05D006878 ORTHO05D008579 1.0e-20 104.0 110 50.0
Oeu005107.2 Olea europaea HOM05D006878 ORTHO05D008579 1.3e-20 103.6 111 49.5
MELO3C008189.2 Cucumis melo HOM05D006878 ORTHO05D008579 1.7e-20 103.2 112 51.8
Eucgr.I01641 Eucalyptus grandis HOM05D006878 ORTHO05D008579 1.7e-20 103.2 112 50.9
Nitab4.5_0002050g0060 Nicotiana tabacum HOM05D006878 ORTHO05D008579 1.7e-20 103.2 111 48.6
CSS0001354 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 2.3e-20 102.8 107 50.5
CsaV3_2G034120 Cucumis sativus L. HOM05D006878 ORTHO05D008579 2.3e-20 102.8 112 51.8
HanXRQChr14g0450611 Helianthus annuus HOM05D006878 ORTHO05D008579 2.3e-20 102.8 116 46.6
Duzib147G1327 Durio zibethinus HOM05D006878 ORTHO05D008579 2.9e-20 102.4 111 47.7
PGR142G3785 Punica granatum HOM05D006878 ORTHO05D008579 2.9e-20 102.4 111 46.8
Aa31LG11G14940 Aethionema arabicum HOM05D006878 ORTHO05D008579 3.8e-20 102.1 112 47.3
AT5G14140 Arabidopsis thaliana HOM05D006878 ORTHO05D008579 5.0e-20 101.7 114 45.6
MD17G1000600 Malus domestica HOM05D006878 ORTHO05D008579 5.0e-20 101.7 119 47.1
Atru.chr6.2581 Acer truncatum HOM05D006878 ORTHO05D008579 6.6e-20 101.3 111 51.4
Glyma.16G056000 Glycine max HOM05D006878 ORTHO05D008579 6.6e-20 101.3 119 47.9
AL6G24810 Arabidopsis lyrata HOM05D006878 ORTHO05D008579 8.6e-20 100.9 114 46.5
BcaB01g05305 Brassica carinata HOM05D006878 ORTHO05D008579 8.6e-20 100.9 120 45.0
C03p07460 Brassica napus HOM05D006878 ORTHO05D008579 8.6e-20 100.9 120 45.0
BolC3t13247H Brassica oleracea HOM05D006878 ORTHO05D008579 8.6e-20 100.9 120 45.0
CAN.G473.102 Capsicum annuum HOM05D006878 ORTHO05D008579 8.6e-20 100.9 111 47.7
Gohir.A07G228800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 8.6e-20 100.9 110 49.1
Lju41C53T12 Lonicera japonica HOM05D006878 ORTHO05D008579 8.6e-20 100.9 111 50.5
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea HOM05D006878 ORTHO05D008579 1.1e-19 100.5 114 50.0
MSTRG.3257 Avicennia marina HOM05D006878 ORTHO05D008579 1.1e-19 100.5 111 48.6
Migut.K01467 Erythranthe guttata HOM05D006878 ORTHO05D008579 1.1e-19 100.5 111 47.7
Nitab4.5_0009844g0010 Nicotiana tabacum HOM05D006878 ORTHO05D008579 1.1e-19 100.5 111 48.6
Sp6g29870 Schrenkiella parvula HOM05D006878 ORTHO05D008579 1.1e-19 100.5 114 45.6
SpUn0049_0070 Schrenkiella parvula HOM05D006878 ORTHO05D008579 1.1e-19 100.5 114 45.6
Sopen02g038800 Solanum pennellii HOM05D006878 ORTHO05D008579 1.1e-19 100.5 111 51.4
A03p06460 Brassica napus HOM05D006878 ORTHO05D008579 1.5e-19 100.1 120 45.0
BraA03t09977Z Brassica rapa HOM05D006878 ORTHO05D008579 1.5e-19 100.1 120 45.0
CANSAT64G0355 Cannabis sativa HOM05D006878 ORTHO05D008579 1.5e-19 100.1 112 48.2
Psat3g178400 Pisum sativum HOM05D006878 ORTHO05D008579 1.5e-19 100.1 117 45.3
Solyc02g094170.3 Solanum lycopersicum HOM05D006878 ORTHO05D008579 1.5e-19 100.1 111 51.4
DCAR_015107 Daucus carota HOM05D006878 ORTHO05D008579 2.5e-19 99.4 111 47.7
Medtr7g029090 Medicago truncatula HOM05D006878 ORTHO05D008579 2.5e-19 99.4 118 47.5
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea HOM05D006878 ORTHO05D008579 3.3e-19 99.0 114 49.1
Potri.001G329300 Populus trichocarpa HOM05D006878 ORTHO05D008579 3.3e-19 99.0 111 46.8
FAN09G4559 Fragaria x ananassa HOM05D006878 ORTHO05D008579 5.5e-19 98.2 147 42.9
FvH4_6g53600 Fragaria vesca HOM05D006878 ORTHO05D008579 7.2e-19 97.8 146 42.5
THA.LOC104821122 Tarenaya hassleriana HOM05D006878 ORTHO05D008579 7.2e-19 97.8 116 46.6
PGSC0003DMG400020210 Solanum tuberosum HOM05D006878 ORTHO05D008579 9.5e-19 97.4 108 49.1
Zm00001eb112900 Zea mays HOM05D006878 ORTHO05D008579 1.2e-18 97.1 159 36.5
PSO017G0833 Papaver somniferum HOM05D006878 ORTHO05D008579 1.6e-18 96.7 138 44.2
Phvul.001G093000 Phaseolus vulgaris HOM05D006878 ORTHO05D008579 1.6e-18 96.7 117 47.0
VMungo1383G2452 Vigna mungo HOM05D006878 ORTHO05D008579 1.6e-18 96.7 120 48.3
BcaB01g06341 Brassica carinata HOM05D006878 ORTHO05D008579 2.1e-18 96.3 120 44.2
Sabra16G0210700 Salix brachista HOM05D006878 ORTHO05D008579 3.6e-18 95.5 111 45.0
Os11g0498400 Oryza sativa ssp. japonica HOM05D006878 ORTHO05D008579 4.7e-18 95.1 151 36.4
FAN14G5463 Fragaria x ananassa HOM05D006878 ORTHO05D008579 6.1e-18 94.7 146 41.8
Lj1g0011001 Lotus japonicus HOM05D006878 ORTHO05D008579 6.1e-18 94.7 111 49.5
Lalb_Chr22g0360351 Lupinus albus HOM05D006878 ORTHO05D008579 6.1e-18 94.7 110 50.9
RcHm_v2.0_Chr2g0175731 Rosa chinensis HOM05D006878 ORTHO05D008579 6.1e-18 94.7 147 40.8
Manes.15G161800 Manihot esculenta HOM05D006878 ORTHO05D008579 8.0e-18 94.4 112 44.6
AUR62003439 Chenopodium quinoa HOM05D006878 ORTHO05D008579 1.0e-17 94.0 111 47.7
Nn3g16452 Nelumbo nucifera HOM05D006878 ORTHO05D008579 1.0e-17 94.0 111 47.7
PSO478G0882 Papaver somniferum HOM05D006878 ORTHO05D008579 2.3e-17 92.8 138 41.3
FAN02G3703 Fragaria x ananassa HOM05D006878 ORTHO05D008579 6.8e-17 91.3 147 39.5
AUR62029405 Chenopodium quinoa HOM05D006878 ORTHO05D008579 3.4e-16 89.0 111 45.9
Sc03g0006490 Simmondsia chinensis HOM05D006878 ORTHO05D008579 7.5e-16 87.8 122 39.3
Ah.02g119990 Amaranthus hybridus HOM05D006878 ORTHO05D008579 1.3e-15 87.0 115 47.0
EL10Ac6g15414 Beta vulgaris HOM05D006878 ORTHO05D008579 2.2e-15 86.3 114 46.5
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 6.3e-15 84.7 111 41.4
SHI03949 Sapria himalayana HOM05D006878 ORTHO05D008579 6.3e-15 84.7 116 39.7
ECA238G1054 Erigeron canadensis HOM05D006878 ORTHO05D008579 1.8e-14 83.2 143 33.6
CARHR199200 Cardamine hirsuta HOM05D006878 ORTHO05D008579 1.1e-11 73.9 113 38.1
CiPaw.04G036900 Carya illinoinensis HOM05D006878 ORTHO05D008579 6.8e-09 64.7 90 45.6
Medtr7g029095 Medicago truncatula HOM05D006878 ORTHO05D008579 2.2e-07 59.7 148 31.8
SMO367G0946 Selaginella moellendorffii HOM05D006878 ORTHO05D008579 3.7e-07 58.9 101 39.6


User provided reference genes

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