Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 8.6e-62 240.4 140 100.0
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 9.0e-35 150.6 100 93.0
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 2.9e-33 145.6 136 69.1
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 8.4e-33 144.1 144 68.1
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 3.2e-32 142.1 98 88.8
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 3.2e-32 142.1 103 86.4
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 5.4e-32 141.4 110 67.3
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 7.1e-32 141.0 99 83.8
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 7.1e-32 141.0 99 83.8
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 7.1e-32 141.0 153 64.7
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.2e-31 140.2 99 84.8
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.2e-31 140.2 99 84.8
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 1.2e-31 140.2 98 88.8
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 2.7e-31 139.0 98 88.8
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 3.5e-31 138.7 144 68.1
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 3.5e-31 138.7 144 68.1
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 3.5e-31 138.7 103 82.5
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 3.5e-31 138.7 147 61.9
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 3.5e-31 138.7 145 63.4
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 4.6e-31 138.3 98 88.8
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 4.6e-31 138.3 98 84.7
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 6.0e-31 137.9 144 68.1
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 1.0e-30 137.1 144 67.4
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 1.0e-30 137.1 106 84.0
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 1.8e-30 136.3 144 67.4
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 1.8e-30 136.3 144 67.4
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 3.0e-30 135.6 127 70.1
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 3.0e-30 135.6 142 64.1
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 3.9e-30 135.2 141 68.1
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 5.1e-30 134.8 100 82.0
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 6.7e-30 134.4 139 68.3
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 6.7e-30 134.4 149 63.8
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 6.7e-30 134.4 105 83.8
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 1.1e-29 133.7 105 81.0
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 1.1e-29 133.7 131 68.7
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 1.1e-29 133.7 98 86.7
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 1.5e-29 133.3 108 76.9
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 1.5e-29 133.3 145 64.1
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 1.9e-29 132.9 98 82.7
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 1.9e-29 132.9 145 64.8
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 4.3e-29 131.7 103 80.6
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 5.6e-29 131.3 98 85.7
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 7.4e-29 131.0 106 76.4
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 7.4e-29 131.0 106 76.4
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 7.4e-29 131.0 98 83.7
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 9.6e-29 130.6 148 63.5
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 1.3e-28 130.2 138 65.9
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 2.1e-28 129.4 139 65.5
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 2.8e-28 129.0 127 68.5
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 2.8e-28 129.0 106 76.4
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 2.8e-28 129.0 95 87.4
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 3.6e-28 128.6 99 83.8
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 4.8e-28 128.3 106 77.4
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 4.8e-28 128.3 126 68.3
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 4.8e-28 128.3 99 82.8
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 6.2e-28 127.9 106 74.5
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 8.1e-28 127.5 103 75.7
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 8.1e-28 127.5 134 64.2
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 1.4e-27 126.7 98 79.6
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 1.4e-27 126.7 110 60.9
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 1.8e-27 126.3 103 77.7
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 3.1e-27 125.6 103 75.7
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 3.1e-27 125.6 104 72.1
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 6.9e-27 124.4 99 81.8
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 9.0e-27 124.0 98 62.2
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 9.0e-27 124.0 98 79.6
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 1.2e-26 123.6 135 60.7
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 1.5e-26 123.2 138 63.8
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 1.5e-26 123.2 118 70.3
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 2.0e-26 122.9 135 61.5
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 2.0e-26 122.9 147 59.9
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 2.0e-26 122.9 118 66.9
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 2.6e-26 122.5 135 62.2
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 3.4e-26 122.1 106 73.6
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 4.5e-26 121.7 104 77.9
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 7.6e-26 120.9 101 75.2
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 7.6e-26 120.9 105 55.2
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 9.9e-26 120.6 130 65.4
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 9.9e-26 120.6 98 82.7
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 1.7e-25 119.8 111 71.2
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 1.7e-25 119.8 139 61.2
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 2.2e-25 119.4 131 59.5
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 2.2e-25 119.4 99 76.8
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 2.2e-25 119.4 118 68.6
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 2.9e-25 119.0 108 74.1
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 2.9e-25 119.0 98 78.6
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 3.8e-25 118.6 100 72.0
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 4.9e-25 118.2 98 74.5
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 6.4e-25 117.9 105 68.6
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 1.9e-24 116.3 67 79.1
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 2.4e-24 115.9 99 75.8
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 2.4e-24 115.9 99 77.8
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 4.2e-24 115.2 99 73.7
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 5.5e-24 114.8 96 76.0
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 1.0e-22 110.5 133 61.7
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 1.8e-22 109.8 110 66.4
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 3.9e-22 108.6 126 62.7
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 4.3e-21 105.1 89 75.3
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 1.2e-18 97.1 112 57.1
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 1.3e-17 93.6 75 80.0
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 8.4e-17 90.9 55 67.3
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 1.4e-16 90.1 71 77.5
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 4.2e-16 88.6 82 74.4
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 9.3e-16 87.4 71 77.5
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 8.2e-12 74.3 88 50.0


User provided reference genes

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