Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 0.0e+00 1178.3 585 100.0
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 2.6e-200 702.6 457 75.7
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 4.1e-198 695.3 462 73.6
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 8.5e-196 687.6 458 74.7
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 1.4e-193 680.2 455 72.7
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 4.0e-193 678.7 455 72.5
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 1.2e-192 677.2 455 72.5
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 9.7e-192 674.1 459 72.1
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 1.7e-191 673.3 457 70.9
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 3.7e-191 672.2 456 72.8
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 8.2e-191 671.0 458 71.8
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 8.2e-191 671.0 448 72.1
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 1.8e-190 669.8 468 69.7
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 1.8e-190 669.8 460 70.4
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 1.8e-190 669.8 459 71.0
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 5.3e-190 668.3 442 72.6
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 7.0e-190 667.9 457 70.5
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 9.1e-190 667.5 457 70.9
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 1.6e-189 666.8 476 70.6
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 2.7e-189 666.0 448 71.7
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 1.3e-188 663.7 455 71.4
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 1.7e-188 663.3 455 71.6
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 2.9e-188 662.5 457 72.0
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 3.8e-188 662.1 458 71.2
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 5.0e-188 661.8 457 70.5
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 6.5e-188 661.4 459 69.7
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 6.5e-188 661.4 457 70.5
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 1.1e-187 660.6 460 71.5
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 3.2e-187 659.1 457 70.9
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 5.5e-187 658.3 448 72.5
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 5.5e-187 658.3 438 74.0
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 9.4e-187 657.5 488 67.8
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 9.4e-187 657.5 458 71.0
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 1.2e-186 657.1 482 67.8
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 1.6e-186 656.8 461 70.3
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 1.6e-186 656.8 453 70.2
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 2.7e-186 656.0 461 70.3
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 2.7e-186 656.0 457 71.1
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 2.7e-186 656.0 457 70.5
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 6.1e-186 654.8 448 70.5
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 6.1e-186 654.8 470 69.4
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 8.0e-186 654.4 423 74.9
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 1.4e-185 653.7 461 69.2
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 2.3e-185 652.9 457 70.2
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 4.0e-185 652.1 461 69.0
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 6.8e-185 651.4 458 67.9
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 8.8e-185 651.0 438 71.7
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 1.2e-184 650.6 458 70.1
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 1.5e-184 650.2 457 69.8
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 1.5e-184 650.2 461 70.3
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 2.0e-184 649.8 467 67.2
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 2.0e-184 649.8 438 71.5
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 5.7e-184 648.3 438 71.9
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 5.7e-184 648.3 455 70.3
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 2.8e-183 646.0 452 69.9
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 3.7e-183 645.6 452 69.9
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 3.7e-183 645.6 461 70.1
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 3.7e-183 645.6 438 70.5
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 4.8e-183 645.2 452 70.1
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 1.1e-182 644.0 457 69.1
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 1.1e-182 644.0 458 66.8
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 4.1e-182 642.1 438 72.4
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 9.1e-182 641.0 441 71.9
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 1.2e-181 640.6 468 68.4
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 2.0e-181 639.8 459 67.1
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 2.0e-181 639.8 456 67.1
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 2.7e-181 639.4 440 71.1
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 1.0e-180 637.5 443 70.7
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 2.3e-180 636.3 455 67.3
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 8.6e-180 634.4 452 68.4
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 1.5e-179 633.6 458 66.8
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 3.3e-179 632.5 458 66.6
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 5.5e-179 631.7 458 66.4
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 5.5e-179 631.7 459 68.4
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 9.5e-179 630.9 468 65.6
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 9.5e-179 630.9 477 64.6
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 9.5e-179 630.9 459 67.8
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 1.6e-178 630.2 458 66.4
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 1.6e-178 630.2 460 68.0
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 2.1e-178 629.8 458 66.6
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 2.8e-178 629.4 460 68.5
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 4.7e-178 628.6 458 68.6
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 1.5e-176 623.6 457 66.1
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 3.7e-175 619.0 458 67.2
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 6.3e-175 618.2 452 68.4
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 1.4e-174 617.1 457 67.0
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 9.2e-174 614.4 439 67.2
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 1.3e-172 610.5 506 63.8
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 5.0e-172 608.6 459 64.9
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 3.0e-169 599.4 471 64.3
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 1.2e-168 597.4 497 62.8
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 2.0e-168 596.7 471 62.4
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 3.4e-168 595.9 463 64.4
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 1.7e-167 593.6 422 69.2
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 2.7e-165 586.3 395 71.1
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 5.6e-163 578.6 410 70.0
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 6.2e-162 575.1 422 66.4
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 2.2e-159 566.6 435 65.5
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 4.1e-158 562.4 467 60.2
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 1.6e-154 550.4 384 71.1
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 2.9e-151 539.7 472 58.1
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 4.9e-151 538.9 471 60.9
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 1.1e-150 537.7 461 61.2
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 5.1e-148 528.9 438 58.2
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 1.2e-144 517.7 446 57.8
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 7.6e-144 515.0 440 56.6
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 7.1e-142 508.4 436 58.9
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 3.0e-140 503.1 330 73.0
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 2.5e-139 500.0 438 54.1
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 6.0e-125 452.2 454 54.4
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 1.3e-122 444.5 273 77.7
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 3.1e-113 413.3 439 46.5
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 4.3e-107 392.9 460 50.9
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 5.1e-100 369.4 435 44.8
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 5.9e-88 329.3 324 54.9
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 6.5e-87 325.9 380 48.4
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 1.0e-84 318.5 177 84.7
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 2.5e-78 297.4 482 38.0
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 2.5e-54 217.6 161 67.1
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 8.0e-53 212.6 346 38.2
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 2.6e-51 207.6 108 86.1
RcHm_v2.0_Chr4g0417261 Rosa chinensis HOM05D005577 ORTHO05D006941 9.8e-43 179.1 384 33.9
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 9.5e-38 162.5 123 69.1
RcHm_v2.0_Chr4g0417231 Rosa chinensis HOM05D005577 ORTHO05D006941 4.0e-36 157.1 137 62.8
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 4.9e-34 150.2 400 30.2
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 2.4e-33 147.9 131 61.8
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 2.6e-27 127.9 96 58.3
Lsat_1_v5_gn_0_16180 Lactuca sativa HOM05D005577 ORTHO05D006941 4.2e-25 120.6 126 49.2
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 5.4e-25 120.2 101 58.4
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 1.3e-21 109.0 53 84.9
MCO16G135 Micromonas commoda HOM05D005577 ORTHO05D267611 9.9e-19 99.4 193 32.6
A10p10750 Brassica napus HOM05D005577 ORTHO05D006941 1.9e-17 95.1 72 54.2
SHI17982 Sapria himalayana HOM05D005577 ORTHO05D006941 1.2e-16 92.4 81 55.6
MD16G1122100 Malus domestica HOM05D005577 ORTHO05D006941 4.6e-16 90.5 71 59.2
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 1.7e-15 88.6 104 45.2
RcHm_v2.0_Chr4g0417241 Rosa chinensis HOM05D005577 ORTHO05D006941 3.9e-15 87.4 69 59.4
Duzib268G0110 Durio zibethinus HOM05D005577 ORTHO05D006941 4.8e-13 80.5 101 43.6
SHI17981 Sapria himalayana HOM05D005577 ORTHO05D006941 2.7e-08 64.7 53 66.0


User provided reference genes

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