Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3009 Ceratophyllum demersum HOM05D004608 ORTHO05D006533 3.0e-35 151.4 80 100.0
Nn1g07694 Nelumbo nucifera HOM05D004608 ORTHO05D006533 6.5e-22 107.1 73 75.3
Actinidia10581 Actinidia chinensis HOM05D004608 ORTHO05D006533 5.5e-21 104.0 73 72.6
GSVIVG01014786001 Vitis vinifera HOM05D004608 ORTHO05D006533 9.4e-21 103.2 78 70.5
MBI14_g00953_MAGBIO Magnolia biondii HOM05D004608 ORTHO05D006533 1.2e-20 102.8 73 74.0
Sc03g0011700 Simmondsia chinensis HOM05D004608 ORTHO05D006533 1.2e-20 102.8 73 72.6
Dinv40894 Davidia involucrata HOM05D004608 ORTHO05D006533 1.6e-20 102.4 73 71.2
Migut.M01599 Erythranthe guttata HOM05D004608 ORTHO05D006533 1.6e-20 102.4 73 69.9
Zm00001eb205890 Zea mays HOM05D004608 ORTHO05D006533 1.6e-20 102.4 77 68.8
Cc05_g15480 Coffea canephora HOM05D004608 ORTHO05D006533 2.1e-20 102.1 73 71.2
Actinidia30368 Actinidia chinensis HOM05D004608 ORTHO05D006533 2.7e-20 101.7 73 69.9
CSS0013715 Camellia sinensis var. sinensis HOM05D004608 ORTHO05D006533 2.7e-20 101.7 73 69.9
CSS0047803 Camellia sinensis var. sinensis HOM05D004608 ORTHO05D006533 2.7e-20 101.7 73 72.6
TAR626G0684 Trochodendron aralioides HOM05D004608 ORTHO05D006533 3.6e-20 101.3 79 68.4
PSO541G2325 Papaver somniferum HOM05D004608 ORTHO05D006533 4.7e-20 100.9 77 66.2
vmacro11628 Vaccinium macrocarpon HOM05D004608 ORTHO05D006533 4.7e-20 100.9 71 71.8
Glyma.08G337500 Glycine max HOM05D004608 ORTHO05D006533 6.1e-20 100.5 71 74.6
Phvul.006G060300 Phaseolus vulgaris HOM05D004608 ORTHO05D006533 7.9e-20 100.1 71 73.2
Solyc10g005890.3 Solanum lycopersicum HOM05D004608 ORTHO05D006533 7.9e-20 100.1 78 64.1
Sopen10g001840 Solanum pennellii HOM05D004608 ORTHO05D006533 7.9e-20 100.1 78 64.1
Glyma.18G072500 Glycine max HOM05D004608 ORTHO05D006533 1.0e-19 99.8 71 74.6
Nitab4.5_0007214g0010 Nicotiana tabacum HOM05D004608 ORTHO05D006533 1.0e-19 99.8 73 68.5
Oeu026626.2 Olea europaea HOM05D004608 ORTHO05D006533 1.0e-19 99.8 73 69.9
CAN.G492.45 Capsicum annuum HOM05D004608 ORTHO05D006533 1.4e-19 99.4 73 67.1
PGR031G2516 Punica granatum HOM05D004608 ORTHO05D006533 1.4e-19 99.4 71 73.2
Hund22995 Selenicereus undatus HOM05D004608 ORTHO05D006533 1.4e-19 99.4 73 69.9
Cfa016939 Carpinus fangiana HOM05D004608 ORTHO05D006533 1.8e-19 99.0 69 75.4
Rhsim06G0233900 Rhododendron simsii HOM05D004608 ORTHO05D006533 1.8e-19 99.0 71 70.4
Haze_09894 Corylus avellana HOM05D004608 ORTHO05D006533 3.0e-19 98.2 69 73.9
Hma1.2p1_0193F.1_g084100 Hydrangea macrophylla HOM05D004608 ORTHO05D006533 3.0e-19 98.2 78 62.8
Hma1.2p1_2995F.1_g331425 Hydrangea macrophylla HOM05D004608 ORTHO05D006533 3.0e-19 98.2 78 62.8
Lj1C897G12 Lonicera japonica HOM05D004608 ORTHO05D006533 3.0e-19 98.2 73 69.9
Prupe.6G031700 Prunus persica HOM05D004608 ORTHO05D006533 3.0e-19 98.2 73 69.9
TAR624G0837 Trochodendron aralioides HOM05D004608 ORTHO05D006533 3.0e-19 98.2 73 71.2
EL10Ac4g07509 Beta vulgaris HOM05D004608 ORTHO05D006533 3.9e-19 97.8 73 71.2
CARHR087890 Cardamine hirsuta HOM05D004608 ORTHO05D006533 3.9e-19 97.8 73 69.9
Thhalv10020839m.g Eutrema salsugineum HOM05D004608 ORTHO05D006533 3.9e-19 97.8 73 69.9
Ca_14850_v3 Cicer arietinum L. HOM05D004608 ORTHO05D006533 5.1e-19 97.4 69 71.0
MD03G1039600 Malus domestica HOM05D004608 ORTHO05D006533 5.1e-19 97.4 73 68.5
Ciclev10008478m.g Citrus clementina HOM05D004608 ORTHO05D006533 6.7e-19 97.1 73 69.9
QL08p001615 Quercus lobata HOM05D004608 ORTHO05D006533 6.7e-19 97.1 71 73.2
Sp3g11470 Schrenkiella parvula HOM05D004608 ORTHO05D006533 6.7e-19 97.1 69 72.5
Sed0006020 Sechium edule HOM05D004608 ORTHO05D006533 6.7e-19 97.1 71 69.0
Aa31LG8G500 Aethionema arabicum HOM05D004608 ORTHO05D006533 8.8e-19 96.7 73 69.9
C03p46240 Brassica napus HOM05D004608 ORTHO05D006533 8.8e-19 96.7 69 72.5
Eucgr.F03661 Eucalyptus grandis HOM05D004608 ORTHO05D006533 8.8e-19 96.7 71 71.8
HanXRQChr11g0334621 Helianthus annuus HOM05D004608 ORTHO05D006533 8.8e-19 96.7 73 65.8
Oeu019694.2 Olea europaea HOM05D004608 ORTHO05D006533 8.8e-19 96.7 73 67.1
HPP92_021912 Vanilla planifolia HOM05D004608 ORTHO05D006533 8.8e-19 96.7 69 71.0
VMungo0540G0162 Vigna mungo HOM05D004608 ORTHO05D006533 8.8e-19 96.7 66 74.2
A01p40280 Brassica napus HOM05D004608 ORTHO05D006533 1.1e-18 96.3 69 72.5
BolC3t16895H Brassica oleracea HOM05D004608 ORTHO05D006533 1.1e-18 96.3 69 72.5
BraA01t04064Z Brassica rapa HOM05D004608 ORTHO05D006533 1.1e-18 96.3 69 72.5
THA.LOC104815684 Tarenaya hassleriana HOM05D004608 ORTHO05D006533 1.1e-18 96.3 73 68.5
Cpa.g.sc12.91 Carica papaya HOM05D004608 ORTHO05D006533 1.5e-18 95.9 73 67.1
DCAR_017596 Daucus carota HOM05D004608 ORTHO05D006533 1.5e-18 95.9 72 68.1
RcHm_v2.0_Chr5g0075221 Rosa chinensis HOM05D004608 ORTHO05D006533 1.5e-18 95.9 74 66.2
THA.LOC104801910 Tarenaya hassleriana HOM05D004608 ORTHO05D006533 1.5e-18 95.9 73 68.5
THA.LOC104810298 Tarenaya hassleriana HOM05D004608 ORTHO05D006533 1.5e-18 95.9 73 68.5
AL3G25090 Arabidopsis lyrata HOM05D004608 ORTHO05D006533 2.0e-18 95.5 69 72.5
AT3G13235 Arabidopsis thaliana HOM05D004608 ORTHO05D006533 2.0e-18 95.5 69 72.5
C01p51800 Brassica napus HOM05D004608 ORTHO05D006533 2.0e-18 95.5 69 72.5
SGA_v2.0_scaffold168G38588 Striga asiatica HOM05D004608 ORTHO05D006533 2.0e-18 95.5 69 66.7
AUR62020809 Chenopodium quinoa HOM05D004608 ORTHO05D006533 2.6e-18 95.1 77 66.2
ClCG09G021670 Citrullus lanatus HOM05D004608 ORTHO05D006533 2.6e-18 95.1 71 69.0
MELO3C013214.2 Cucumis melo HOM05D004608 ORTHO05D006533 2.6e-18 95.1 71 69.0
CsaV3_7G021370 Cucumis sativus L. HOM05D004608 ORTHO05D006533 2.6e-18 95.1 71 69.0
MD11G1040100 Malus domestica HOM05D004608 ORTHO05D006533 2.6e-18 95.1 71 69.0
Psat5g164640 Pisum sativum HOM05D004608 ORTHO05D006533 2.6e-18 95.1 69 69.6
MSTRG.7029 Avicennia marina HOM05D004608 ORTHO05D006533 3.3e-18 94.7 74 62.2
Duzib213G0525 Durio zibethinus HOM05D004608 ORTHO05D006533 3.3e-18 94.7 73 67.1
Thecc.07G005400 Theobroma cacao HOM05D004608 ORTHO05D006533 3.3e-18 94.7 71 70.4
TWI38G1265 Tripterygium wilfordii HOM05D004608 ORTHO05D006533 3.3e-18 94.7 73 65.8
Gohir.A13G130142 Gossypium hirsutum HOM05D004608 ORTHO05D006533 4.4e-18 94.4 71 69.0
Gohir.D13G133200 Gossypium hirsutum HOM05D004608 ORTHO05D006533 4.4e-18 94.4 71 69.0
TPR.G17932 Trifolium pratense HOM05D004608 ORTHO05D006533 4.4e-18 94.4 73 67.1
FAN25G0703 Fragaria x ananassa HOM05D004608 ORTHO05D006533 5.7e-18 94.0 74 64.9
Manes.05G206400 Manihot esculenta HOM05D004608 ORTHO05D006533 5.7e-18 94.0 73 67.1
Potri.001G469300 Populus trichocarpa HOM05D004608 ORTHO05D006533 5.7e-18 94.0 73 67.1
Potri.011G166100 Populus trichocarpa HOM05D004608 ORTHO05D006533 5.7e-18 94.0 73 67.1
COL.COLO4_07760 Corchorus olitorius HOM05D004608 ORTHO05D006533 7.4e-18 93.6 71 67.6
HanXRQChr05g0160221 Helianthus annuus HOM05D004608 ORTHO05D006533 7.4e-18 93.6 73 65.8
Lsat_1_v5_gn_7_116460 Lactuca sativa HOM05D004608 ORTHO05D006533 7.4e-18 93.6 71 67.6
Lalb_Chr15g0082461 Lupinus albus HOM05D004608 ORTHO05D006533 7.4e-18 93.6 63 76.2
TWI38G2408 Tripterygium wilfordii HOM05D004608 ORTHO05D006533 9.7e-18 93.2 73 64.4
Atru.chr2.3848 Acer truncatum HOM05D004608 ORTHO05D006533 1.3e-17 92.8 73 67.1
A03p38110 Brassica napus HOM05D004608 ORTHO05D006533 1.3e-17 92.8 66 72.7
BraA03t12964Z Brassica rapa HOM05D004608 ORTHO05D006533 1.3e-17 92.8 66 72.7
Peaxi162Scf00219g00158 Petunia axillaris HOM05D004608 ORTHO05D006533 1.3e-17 92.8 73 65.8
Sed0022757 Sechium edule HOM05D004608 ORTHO05D006533 1.3e-17 92.8 71 66.2
Aqoxy4G02317 Aquilegia oxysepala HOM05D004608 ORTHO05D006533 1.7e-17 92.4 69 66.7
CiPaw.12G141700 Carya illinoinensis HOM05D004608 ORTHO05D006533 1.7e-17 92.4 71 69.0
Os02g0198600 Oryza sativa ssp. japonica HOM05D004608 ORTHO05D006533 2.2e-17 92.0 69 65.2
FvH4_3g42010 Fragaria vesca HOM05D004608 ORTHO05D006533 2.8e-17 91.7 74 63.5
FAN11G3108 Fragaria x ananassa HOM05D004608 ORTHO05D006533 2.8e-17 91.7 74 63.5
FAN16G3187 Fragaria x ananassa HOM05D004608 ORTHO05D006533 2.8e-17 91.7 74 63.5
PGSC0003DMG400014406 Solanum tuberosum HOM05D004608 ORTHO05D006533 2.8e-17 91.7 73 61.6
unitig_899.g15266 Utricularia gibba HOM05D004608 ORTHO05D006533 2.8e-17 91.7 74 64.9
FAN21G2140 Fragaria x ananassa HOM05D004608 ORTHO05D006533 3.7e-17 91.3 74 63.5
arahy.Tifrunner.gnm1.ann1.EI2AUC Arachis hypogaea HOM05D004608 ORTHO05D006533 6.3e-17 90.5 63 73.0
arahy.Tifrunner.gnm1.ann1.R4UTE8 Arachis hypogaea HOM05D004608 ORTHO05D006533 6.3e-17 90.5 63 73.0
CANSAT11G0422 Cannabis sativa HOM05D004608 ORTHO05D006533 6.3e-17 90.5 73 63.0
Sabra11G0139800 Salix brachista HOM05D004608 ORTHO05D006533 6.3e-17 90.5 73 65.8
Sabra16G0318300 Salix brachista HOM05D004608 ORTHO05D006533 6.3e-17 90.5 73 65.8
Lj6g0013957 Lotus japonicus HOM05D004608 ORTHO05D006533 8.2e-17 90.1 63 73.0
Gohir.D05G386600 Gossypium hirsutum HOM05D004608 ORTHO05D006533 1.4e-16 89.4 80 61.2
Gorai.009G453300 Gossypium raimondii HOM05D004608 ORTHO05D006533 1.4e-16 89.4 80 61.2
ECA236G2785 Erigeron canadensis HOM05D004608 ORTHO05D006533 1.8e-16 89.0 73 61.6
Carub.0003s1265 Capsella rubella HOM05D004608 ORTHO05D006533 3.1e-16 88.2 63 73.0
BolC1t05127H Brassica oleracea HOM05D004608 ORTHO05D006533 5.3e-16 87.4 81 61.7
AUR62035639 Chenopodium quinoa HOM05D004608 ORTHO05D006533 7.0e-16 87.0 72 63.9
Gorai.013G149500 Gossypium raimondii HOM05D004608 ORTHO05D006533 7.0e-16 87.0 79 62.0
AUR62017165 Chenopodium quinoa HOM05D004608 ORTHO05D006533 9.1e-16 86.7 72 63.9
Gohir.A04G003100 Gossypium hirsutum HOM05D004608 ORTHO05D006533 2.6e-15 85.1 80 57.5
Pp3c4_20890 Physcomitrium patens HOM05D004608 ORTHO05D006533 3.8e-14 81.3 71 54.9
AagrBONN_evm.TU.Sc2ySwM_117.3155 Anthoceros agrestis HOM05D004608 ORTHO05D006533 1.6e-12 75.9 67 53.7
Aa31LG10G470 Aethionema arabicum HOM05D004608 ORTHO05D006533 2.3e-11 72.0 73 53.4
Aa31LG10G450 Aethionema arabicum HOM05D004608 ORTHO05D006533 3.0e-11 71.6 72 52.8
Ah.06g180950 Amaranthus hybridus HOM05D004608 ORTHO05D006533 2.6e-10 68.6 51 64.7
Oeu019695.1 Olea europaea HOM05D004608 ORTHO05D006533 4.4e-10 67.8 64 60.9
ATR0587G001 Amborella trichopoda HOM05D004608 ORTHO05D006533 5.7e-10 67.4 51 64.7
Mapoly0030s0110 Marchantia polymorpha HOM05D004608 ORTHO05D006533 5.7e-10 67.4 74 43.2
Pp3c17_4800 Physcomitrium patens HOM05D004608 ORTHO05D006533 2.7e-07 58.5 69 44.9
unitig_699.g19599 Utricularia gibba HOM05D004608 ORTHO05D006533 1.0e-06 56.6 69 46.4


User provided reference genes

Program Settings