Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3005 Ceratophyllum demersum HOM05D003994 ORTHO05D004957 5.8e-121 437.6 220 100.0
CDE05G1389 Ceratophyllum demersum HOM05D003994 ORTHO05D004957 3.5e-94 348.6 221 85.1
Nn3g20343 Nelumbo nucifera HOM05D003994 ORTHO05D004957 4.8e-83 311.6 213 76.1
TAR376G0382 Trochodendron aralioides HOM05D003994 ORTHO05D004957 3.1e-82 308.9 223 72.6
TAR629G0599 Trochodendron aralioides HOM05D003994 ORTHO05D004957 9.0e-82 307.4 221 73.3
Aqoxy1G00146 Aquilegia oxysepala HOM05D003994 ORTHO05D004957 7.6e-81 304.3 223 72.6
Aqoxy4G01712 Aquilegia oxysepala HOM05D003994 ORTHO05D004957 1.7e-80 303.1 223 72.2
PSO017G2109 Papaver somniferum HOM05D003994 ORTHO05D004957 1.4e-79 300.1 220 73.6
PSO675G5603 Papaver somniferum HOM05D003994 ORTHO05D004957 1.4e-79 300.1 220 73.6
Dinv41938 Davidia involucrata HOM05D003994 ORTHO05D004957 5.5e-79 298.1 221 71.5
CSS0048612 Camellia sinensis var. sinensis HOM05D003994 ORTHO05D004957 1.3e-77 293.5 211 71.6
COL.COLO4_17341 Corchorus olitorius HOM05D003994 ORTHO05D004957 3.9e-77 292.0 216 69.0
CSS0002177 Camellia sinensis var. sinensis HOM05D003994 ORTHO05D004957 1.5e-76 290.0 211 70.6
Thecc.02G059800 Theobroma cacao HOM05D003994 ORTHO05D004957 2.5e-76 289.3 211 69.7
CsaV3_2G016120 Cucumis sativus L. HOM05D003994 ORTHO05D004957 3.3e-76 288.9 211 70.6
GSVIVG01024019001 Vitis vinifera HOM05D003994 ORTHO05D004957 3.3e-76 288.9 211 71.6
DCAR_025322 Daucus carota HOM05D003994 ORTHO05D004957 4.3e-76 288.5 216 70.4
CiPaw.06G111900 Carya illinoinensis HOM05D003994 ORTHO05D004957 7.4e-76 287.7 211 72.0
Haze_02136 Corylus avellana HOM05D003994 ORTHO05D004957 7.4e-76 287.7 211 69.7
Duzib052G1000 Durio zibethinus HOM05D003994 ORTHO05D004957 7.4e-76 287.7 211 68.7
CANSAT56G2628 Cannabis sativa HOM05D003994 ORTHO05D004957 1.3e-75 287.0 208 70.7
Duzib248G0985 Durio zibethinus HOM05D003994 ORTHO05D004957 1.3e-75 287.0 211 68.2
MD05G1122300 Malus domestica HOM05D003994 ORTHO05D004957 1.6e-75 286.6 213 69.5
PGR042G1915 Punica granatum HOM05D003994 ORTHO05D004957 2.1e-75 286.2 214 69.2
Rhsim05G0056700 Rhododendron simsii HOM05D003994 ORTHO05D004957 3.7e-75 285.4 218 68.3
Sed0013006 Sechium edule HOM05D003994 ORTHO05D004957 4.8e-75 285.0 211 69.7
Gohir.A01G168900 Gossypium hirsutum HOM05D003994 ORTHO05D004957 6.3e-75 284.6 224 66.1
Hma1.2p1_0163F.1_g072490 Hydrangea macrophylla HOM05D003994 ORTHO05D004957 6.3e-75 284.6 211 71.6
Sc08g0002910 Simmondsia chinensis HOM05D003994 ORTHO05D004957 6.3e-75 284.6 226 66.8
Manes.04G058800 Manihot esculenta HOM05D003994 ORTHO05D004957 8.2e-75 284.3 223 67.7
Prupe.7G263800 Prunus persica HOM05D003994 ORTHO05D004957 8.2e-75 284.3 213 69.0
Gohir.D01G159750 Gossypium hirsutum HOM05D003994 ORTHO05D004957 1.1e-74 283.9 211 68.7
Gorai.002G198300 Gossypium raimondii HOM05D003994 ORTHO05D004957 1.1e-74 283.9 211 68.7
Sed0021478 Sechium edule HOM05D003994 ORTHO05D004957 1.1e-74 283.9 211 69.7
MSTRG.27636 Avicennia marina HOM05D003994 ORTHO05D004957 1.8e-74 283.1 223 66.4
Cfa005247 Carpinus fangiana HOM05D003994 ORTHO05D004957 2.4e-74 282.7 211 67.8
TWI79G1032 Tripterygium wilfordii HOM05D003994 ORTHO05D004957 2.4e-74 282.7 216 68.5
CiPaw.05G082400 Carya illinoinensis HOM05D003994 ORTHO05D004957 3.1e-74 282.3 211 68.7
ECA234G2975 Erigeron canadensis HOM05D003994 ORTHO05D004957 3.1e-74 282.3 225 64.0
Rhsim12G0069500 Rhododendron simsii HOM05D003994 ORTHO05D004957 4.1e-74 282.0 216 68.5
Phvul.011G036100 Phaseolus vulgaris HOM05D003994 ORTHO05D004957 5.3e-74 281.6 211 67.3
RcHm_v2.0_Chr7g0224781 Rosa chinensis HOM05D003994 ORTHO05D004957 5.3e-74 281.6 214 68.2
HanXRQChr10g0295951 Helianthus annuus HOM05D003994 ORTHO05D004957 6.9e-74 281.2 225 64.9
BraA08t34371Z Brassica rapa HOM05D003994 ORTHO05D004957 9.0e-74 280.8 217 67.7
A08p24160 Brassica napus HOM05D003994 ORTHO05D004957 1.2e-73 280.4 218 67.0
CANSAT25G2109 Cannabis sativa HOM05D003994 ORTHO05D004957 1.2e-73 280.4 208 67.3
Nitab4.5_0001225g0220 Nicotiana tabacum HOM05D003994 ORTHO05D004957 1.2e-73 280.4 221 67.4
Nitab4.5_0001583g0200 Nicotiana tabacum HOM05D003994 ORTHO05D004957 1.2e-73 280.4 221 67.4
Eucgr.I01421 Eucalyptus grandis HOM05D003994 ORTHO05D004957 2.0e-73 279.6 215 68.8
BcaC01g00237 Brassica carinata HOM05D003994 ORTHO05D004957 2.6e-73 279.3 208 69.7
FvH4_2g13710 Fragaria vesca HOM05D003994 ORTHO05D004957 2.6e-73 279.3 216 68.1
FAN20G1157 Fragaria x ananassa HOM05D003994 ORTHO05D004957 3.4e-73 278.9 216 68.1
Glyma.11G091200 Glycine max HOM05D003994 ORTHO05D004957 4.5e-73 278.5 208 68.3
FvH4_2g14000 Fragaria vesca HOM05D003994 ORTHO05D004957 5.9e-73 278.1 216 68.1
BcaB05g24329 Brassica carinata HOM05D003994 ORTHO05D004957 7.6e-73 277.7 218 66.5
Lsat_1_v5_gn_8_167161 Lactuca sativa HOM05D003994 ORTHO05D004957 7.6e-73 277.7 225 63.6
AT1G68000 Arabidopsis thaliana HOM05D003994 ORTHO05D004957 2.2e-72 276.2 211 67.8
PGSC0003DMG401014852 Solanum tuberosum HOM05D003994 ORTHO05D004957 2.2e-72 276.2 221 66.5
QL11p050712 Quercus lobata HOM05D003994 ORTHO05D004957 3.8e-72 275.4 211 67.8
Solyc08g005985.1 Solanum lycopersicum HOM05D003994 ORTHO05D004957 3.8e-72 275.4 221 66.5
Sopen08g001960 Solanum pennellii HOM05D003994 ORTHO05D004957 3.8e-72 275.4 221 66.5
BcaB03g15393 Brassica carinata HOM05D003994 ORTHO05D004957 5.0e-72 275.0 215 66.5
BolC2t08504H Brassica oleracea HOM05D003994 ORTHO05D004957 5.0e-72 275.0 211 67.8
FAN27G1606 Fragaria x ananassa HOM05D003994 ORTHO05D004957 5.0e-72 275.0 216 67.1
CARHR060640 Cardamine hirsuta HOM05D003994 ORTHO05D004957 6.5e-72 274.6 211 67.8
Potri.009G135500 Populus trichocarpa HOM05D003994 ORTHO05D004957 6.5e-72 274.6 212 67.0
AL2G26920 Arabidopsis lyrata HOM05D003994 ORTHO05D004957 8.5e-72 274.2 211 67.8
Hund16215 Selenicereus undatus HOM05D003994 ORTHO05D004957 8.5e-72 274.2 221 64.7
Actinidia00624 Actinidia chinensis HOM05D003994 ORTHO05D004957 1.1e-71 273.9 235 63.4
BcaC03g14900 Brassica carinata HOM05D003994 ORTHO05D004957 1.1e-71 273.9 211 67.8
A07p32200 Brassica napus HOM05D003994 ORTHO05D004957 1.1e-71 273.9 215 65.6
HanXRQChr16g0514761 Helianthus annuus HOM05D003994 ORTHO05D004957 1.1e-71 273.9 225 62.7
Lalb_Chr19g0139051 Lupinus albus HOM05D003994 ORTHO05D004957 1.1e-71 273.9 211 67.8
Potri.004G175600 Populus trichocarpa HOM05D003994 ORTHO05D004957 1.4e-71 273.5 211 68.2
BcaB03g15140 Brassica carinata HOM05D003994 ORTHO05D004957 2.5e-71 272.7 215 66.5
Carub.0002s1448 Capsella rubella HOM05D003994 ORTHO05D004957 2.5e-71 272.7 208 68.3
Lalb_Chr03g0025191 Lupinus albus HOM05D003994 ORTHO05D004957 2.5e-71 272.7 211 67.3
THA.LOC104824762 Tarenaya hassleriana HOM05D003994 ORTHO05D004957 2.5e-71 272.7 208 70.2
Aa31LG6G16590 Aethionema arabicum HOM05D003994 ORTHO05D004957 3.2e-71 272.3 208 68.8
Os02g0123600 Oryza sativa ssp. japonica HOM05D003994 ORTHO05D004957 3.2e-71 272.3 223 64.1
HPP92_004513 Vanilla planifolia HOM05D003994 ORTHO05D004957 3.2e-71 272.3 208 67.3
ATR0307G066 Amborella trichopoda HOM05D003994 ORTHO05D004957 4.2e-71 271.9 222 68.9
CAN.G940.12 Capsicum annuum HOM05D003994 ORTHO05D004957 4.2e-71 271.9 221 66.1
Thhalv10026160m.g Eutrema salsugineum HOM05D003994 ORTHO05D004957 4.2e-71 271.9 208 68.8
AT4G38570 Arabidopsis thaliana HOM05D003994 ORTHO05D004957 5.5e-71 271.6 208 68.3
C06p37970 Brassica napus HOM05D003994 ORTHO05D004957 7.2e-71 271.2 215 65.1
Lalb_Chr01g0001921 Lupinus albus HOM05D003994 ORTHO05D004957 7.2e-71 271.2 211 66.8
Ah.01g023020 Amaranthus hybridus HOM05D003994 ORTHO05D004957 9.3e-71 270.8 232 61.6
BcaC08g46004 Brassica carinata HOM05D003994 ORTHO05D004957 9.3e-71 270.8 215 65.1
Thhalv10019092m.g Eutrema salsugineum HOM05D003994 ORTHO05D004957 9.3e-71 270.8 208 66.8
Atru.chr5.3321 Acer truncatum HOM05D003994 ORTHO05D004957 1.6e-70 270.0 213 64.8
Sp7g37200 Schrenkiella parvula HOM05D003994 ORTHO05D004957 1.6e-70 270.0 208 68.8
BolC6t38896H Brassica oleracea HOM05D003994 ORTHO05D004957 3.6e-70 268.9 215 64.7
Sp5g23020 Schrenkiella parvula HOM05D003994 ORTHO05D004957 1.0e-69 267.3 211 65.4
SGA_v2.0_scaffold3G01602 Striga asiatica HOM05D003994 ORTHO05D004957 1.3e-69 266.9 223 62.3
Ca_19074_v3 Cicer arietinum L. HOM05D003994 ORTHO05D004957 1.8e-69 266.5 211 64.9
Migut.N01321 Erythranthe guttata HOM05D003994 ORTHO05D004957 1.8e-69 266.5 223 62.8
SGA_v2.0_scaffold16G07672 Striga asiatica HOM05D003994 ORTHO05D004957 1.8e-69 266.5 223 62.3
Zm00001eb274200 Zea mays HOM05D003994 ORTHO05D004957 1.8e-69 266.5 213 66.7
Medtr4g073020 Medicago truncatula HOM05D003994 ORTHO05D004957 3.0e-69 265.8 211 64.5
Cc09_g07710 Coffea canephora HOM05D003994 ORTHO05D004957 3.9e-69 265.4 211 67.3
VMungo1127G1708 Vigna mungo HOM05D003994 ORTHO05D004957 8.7e-69 264.2 198 66.7
TPR.G38794 Trifolium pratense HOM05D003994 ORTHO05D004957 1.1e-68 263.8 211 64.0
TPR.G39214 Trifolium pratense HOM05D003994 ORTHO05D004957 1.1e-68 263.8 211 63.5
vmacro17345 Vaccinium macrocarpon HOM05D003994 ORTHO05D004957 1.5e-68 263.5 201 68.7
EL10Ac9g21377 Beta vulgaris HOM05D003994 ORTHO05D004957 1.9e-68 263.1 206 65.5
AUR62037910 Chenopodium quinoa HOM05D003994 ORTHO05D004957 5.7e-68 261.5 212 62.3
MD10G1124800 Malus domestica HOM05D003994 ORTHO05D004957 9.7e-68 260.8 196 69.4
Carub.0007s0044 Capsella rubella HOM05D003994 ORTHO05D004957 1.6e-67 260.0 207 66.2
MELO3C020821.2 Cucumis melo HOM05D003994 ORTHO05D004957 2.2e-67 259.6 222 63.1
ClCG02G011950 Citrullus lanatus HOM05D003994 ORTHO05D004957 4.8e-67 258.5 228 61.8
MBI02_g21865_MAGBIO Magnolia biondii HOM05D003994 ORTHO05D004957 6.3e-67 258.1 217 65.4
C02p23750 Brassica napus HOM05D003994 ORTHO05D004957 2.4e-66 256.1 200 66.5
C03p77150 Brassica napus HOM05D003994 ORTHO05D004957 5.3e-66 255.0 199 66.8
CARHR294300 Cardamine hirsuta HOM05D003994 ORTHO05D004957 1.2e-65 253.8 197 67.5
A02p14650 Brassica napus HOM05D003994 ORTHO05D004957 3.4e-65 252.3 203 66.0
BraA02t06532Z Brassica rapa HOM05D003994 ORTHO05D004957 3.4e-65 252.3 203 66.0
PGR142G1861 Punica granatum HOM05D003994 ORTHO05D004957 4.5e-65 251.9 203 65.0
Glyma.12G033500 Glycine max HOM05D003994 ORTHO05D004957 7.7e-65 251.1 196 65.8
Lj3g0010701 Lotus japonicus HOM05D003994 ORTHO05D004957 1.0e-64 250.8 208 61.1
Oeu061402.1 Olea europaea HOM05D003994 ORTHO05D004957 3.8e-64 248.8 208 65.4
Psat7g138440 Pisum sativum HOM05D003994 ORTHO05D004957 3.8e-64 248.8 207 60.9
A07p34510 Brassica napus HOM05D003994 ORTHO05D004957 6.5e-64 248.1 198 65.7
AUR62040162 Chenopodium quinoa HOM05D003994 ORTHO05D004957 8.5e-64 247.7 226 57.5
FAN24G3352 Fragaria x ananassa HOM05D003994 ORTHO05D004957 8.5e-64 247.7 216 62.5
FAN15G2236 Fragaria x ananassa HOM05D003994 ORTHO05D004957 2.5e-63 246.1 216 62.5
SalBow3G1772 Salvia bowleyana HOM05D003994 ORTHO05D004957 7.2e-63 244.6 198 65.7
Sabra04G0117500 Salix brachista HOM05D003994 ORTHO05D004957 2.7e-62 242.7 211 62.6
Oeu005708.1 Olea europaea HOM05D003994 ORTHO05D004957 3.6e-62 242.3 209 62.2
FAN24G0721 Fragaria x ananassa HOM05D003994 ORTHO05D004957 2.0e-60 236.5 254 55.1
Lsat_1_v5_gn_5_108021 Lactuca sativa HOM05D003994 ORTHO05D004957 9.7e-60 234.2 185 64.9
Sabra09G0105200 Salix brachista HOM05D003994 ORTHO05D004957 1.3e-59 233.8 233 56.2
unitig_749.g13986 Utricularia gibba HOM05D003994 ORTHO05D004957 3.7e-59 232.3 201 61.2
arahy.Tifrunner.gnm1.ann1.U045QQ Arachis hypogaea HOM05D003994 ORTHO05D004957 1.8e-58 229.9 172 67.4
EL10Ac7g18178 Beta vulgaris HOM05D003994 ORTHO05D004957 2.4e-58 229.6 215 57.2
Mapoly0071s0023 Marchantia polymorpha HOM05D003994 ORTHO05D004957 1.2e-57 227.3 207 59.4
Dinv43046 Davidia involucrata HOM05D003225 ORTHO05D003818 2.0e-57 226.5 191 64.9
arahy.Tifrunner.gnm1.ann1.VZUK08 Arachis hypogaea HOM05D003994 ORTHO05D004957 5.0e-56 221.9 205 59.5
Pp3c3_18340 Physcomitrium patens HOM05D003994 ORTHO05D004957 1.1e-55 220.7 215 55.8
Pp3c4_10100 Physcomitrium patens HOM05D003994 ORTHO05D004957 3.2e-55 219.2 215 57.2
arahy.Tifrunner.gnm1.ann1.L07Y4L Arachis hypogaea HOM05D003994 ORTHO05D004957 6.1e-54 214.9 197 58.9
SHI32381 Sapria himalayana HOM05D003994 ORTHO05D004957 5.7e-52 208.4 222 53.6
SMO112G0024 Selaginella moellendorffii HOM05D003994 ORTHO05D004957 9.7e-52 207.6 207 57.0
Zm00001eb389940 Zea mays HOM05D003994 ORTHO05D004957 2.8e-51 206.1 210 56.7
C03p25490 Brassica napus HOM05D003994 ORTHO05D004957 7.0e-50 201.4 153 68.6
CBR_g32608 Chara braunii HOM05D003994 ORTHO05D004957 7.7e-49 198.0 208 53.4
Lj5C178T13 Lonicera japonica HOM05D003994 ORTHO05D004957 2.2e-48 196.4 157 65.6
SalBow3G2361 Salvia bowleyana HOM05D003994 ORTHO05D004957 2.7e-46 189.5 226 51.3
BolC3t19967H Brassica oleracea HOM05D003994 ORTHO05D004957 8.0e-46 188.0 198 55.6
Cpa.g.sc37.130 Carica papaya HOM05D003994 ORTHO05D004957 8.8e-45 184.5 144 69.4
Peaxi162Scf00045g00144 Petunia axillaris HOM05D003994 ORTHO05D004957 2.2e-43 179.9 221 50.2
SGA_v2.0_scaffold243G44305 Striga asiatica HOM05D003994 ORTHO05D004957 2.2e-43 179.9 180 57.8
BolC6t39228H Brassica oleracea HOM05D000212 ORTHO05D005509 1.6e-41 173.7 164 60.4
SalBow5G5214 Salvia bowleyana HOM05D003994 ORTHO05D004957 2.2e-40 169.9 181 55.2
FAN15G2231 Fragaria x ananassa HOM05D003994 ORTHO05D004957 1.6e-38 163.7 161 58.4
Cre10.g419800 Chlamydomonas reinhardtii HOM05D003994 ORTHO05D004957 8.0e-38 161.4 234 41.9
BcaC08g46226 Brassica carinata HOM05D003994 ORTHO05D004957 3.1e-34 149.4 107 72.0
MBI11_g13142_MAGBIO Magnolia biondii HOM05D003994 ORTHO05D004957 4.1e-34 149.1 225 45.8
MCO09G063 Micromonas commoda HOM05D003994 ORTHO05D004957 2.0e-33 146.7 240 41.2
C06p42000 Brassica napus HOM05D000573 ORTHO05D005509 1.3e-32 144.1 170 54.7
PRCOL_00004558 Prasinoderma coloniale HOM05D003994 ORTHO05D004957 1.2e-30 137.5 151 50.3
arahy.Tifrunner.gnm1.ann1.8L0F4Y Arachis hypogaea HOM05D003994 ORTHO05D004957 2.6e-28 129.8 99 65.7
BcaNung05108 Brassica carinata HOM05D003994 ORTHO05D004957 6.3e-27 125.2 110 62.7
arahy.Tifrunner.gnm1.ann1.NCR277 Arachis hypogaea HOM05D003994 ORTHO05D004957 3.5e-25 119.4 108 56.5
Cfa022653 Carpinus fangiana HOM05D003994 ORTHO05D004957 3.5e-25 119.4 152 45.4
FAN27G1783 Fragaria x ananassa HOM05D003994 ORTHO05D004957 2.3e-21 106.7 109 54.1
RcHm_v2.0_Chr5g0023251 Rosa chinensis HOM05D003994 ORTHO05D004957 2.3e-21 106.7 73 71.2
AL7G10460 Arabidopsis lyrata HOM05D003994 ORTHO05D004957 1.5e-20 104.0 99 56.6
MD08G1201300 Malus domestica HOM05D003994 ORTHO05D036609 1.9e-15 87.0 64 64.1
MD16G1270800 Malus domestica HOM05D003994 ORTHO05D036609 4.7e-14 82.4 68 61.8
THA.LOC104807810 Tarenaya hassleriana HOM05D003994 ORTHO05D004957 1.9e-10 70.5 101 45.5
MBI11_g33763_MAGBIO Magnolia biondii HOM05D003994 ORTHO05D004957 1.6e-09 67.4 69 59.4
Pp3c10_9870 Physcomitrium patens HOM05D003994 ORTHO05D310819 2.0e-09 67.0 191 28.3
arahy.Tifrunner.gnm1.ann1.B18QXV Arachis hypogaea HOM05D003994 ORTHO05D086742 3.6e-06 56.2 66 48.5
Os06g0492000 Oryza sativa ssp. japonica HOM05D003994 ORTHO05D036609 6.2e-06 55.5 40 65.0


User provided reference genes

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