Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2977 Ceratophyllum demersum HOM05D002232 ORTHO05D002323 3.2e-60 235.0 123 100.0
CDE05G1282 Ceratophyllum demersum HOM05D002232 ORTHO05D002323 1.5e-41 172.9 93 100.0
CDE02G4657 Ceratophyllum demersum HOM05D002232 ORTHO05D002323 2.5e-33 145.6 93 83.9
MBI14_g17354_MAGBIO Magnolia biondii HOM05D002232 ORTHO05D002323 9.4e-12 73.9 89 43.8
Thecc.09G170600 Theobroma cacao HOM05D002232 ORTHO05D002323 1.6e-11 73.2 102 43.1
Potri.018G094500 Populus trichocarpa HOM05D002232 ORTHO05D002323 3.6e-11 72.0 103 42.7
Nn2g12692 Nelumbo nucifera HOM05D002232 ORTHO05D002323 1.4e-10 70.1 97 41.2
Peaxi162Scf00610g00348 Petunia axillaris HOM05D002232 ORTHO05D002323 1.4e-10 70.1 95 37.9
Haze_22115 Corylus avellana HOM05D000196 ORTHO05D002323 1.8e-10 69.7 96 42.7
Lalb_Chr12g0199301 Lupinus albus HOM05D002232 ORTHO05D002323 1.8e-10 69.7 79 53.2
MBI16_g41807_MAGBIO Magnolia biondii HOM05D002232 ORTHO05D002323 6.7e-10 67.8 92 38.0
Gohir.A05G005300 Gossypium hirsutum HOM05D002232 ORTHO05D002323 2.0e-09 66.2 97 39.2
CsaV3_2G007950 Cucumis sativus L. HOM05D002232 ORTHO05D002323 2.6e-09 65.9 87 40.2
Duzib168G1054 Durio zibethinus HOM05D002232 ORTHO05D002323 3.3e-09 65.5 102 41.2
TPR.G5321 Trifolium pratense HOM05D002232 ORTHO05D002323 3.3e-09 65.5 72 54.2
Os06g0656300 Oryza sativa ssp. japonica HOM05D002232 ORTHO05D002323 4.4e-09 65.1 91 40.7
arahy.Tifrunner.gnm1.ann1.TW0DHY Arachis hypogaea HOM05D002232 ORTHO05D002323 5.7e-09 64.7 104 40.4
arahy.Tifrunner.gnm1.ann1.8D8HC8 Arachis hypogaea HOM05D002232 ORTHO05D002323 7.4e-09 64.3 104 40.4
Dinv41258 Davidia involucrata HOM05D002232 ORTHO05D002323 7.4e-09 64.3 78 47.4
Dinv42734 Davidia involucrata HOM05D002232 ORTHO05D002323 9.7e-09 63.9 92 39.1
Dinv43367 Davidia involucrata HOM05D002232 ORTHO05D002323 9.7e-09 63.9 92 39.1
TAR625G0425 Trochodendron aralioides HOM05D002232 ORTHO05D002323 1.3e-08 63.5 97 40.2
Gohir.D05G006100 Gossypium hirsutum HOM05D002232 ORTHO05D002323 1.7e-08 63.2 104 37.5
Medtr0693s0030 Medicago truncatula HOM05D002232 ORTHO05D002323 1.7e-08 63.2 72 51.4
Lalb_Chr07g0180361 Lupinus albus HOM05D002232 ORTHO05D002323 3.7e-08 62.0 72 50.0
EL10Ac8g20239 Beta vulgaris HOM05D002232 ORTHO05D002323 4.8e-08 61.6 92 42.4
CiPaw.08G037200 Carya illinoinensis HOM05D002232 ORTHO05D002323 4.8e-08 61.6 71 49.3
Lj4g0020253 Lotus japonicus HOM05D002232 ORTHO05D002323 6.3e-08 61.2 83 47.0
Prupe.1G088100 Prunus persica HOM05D002232 ORTHO05D002323 6.3e-08 61.2 86 40.7
Gorai.009G006000 Gossypium raimondii HOM05D002232 ORTHO05D002323 8.2e-08 60.8 104 36.5
Glyma.13G095400 Glycine max HOM05D002232 ORTHO05D002323 1.1e-07 60.5 78 50.0
Nn8g40497 Nelumbo nucifera HOM05D002232 ORTHO05D002323 1.1e-07 60.5 93 41.9
Ah.09g234050 Amaranthus hybridus HOM05D002232 ORTHO05D002323 1.4e-07 60.1 95 42.1
Sc17g0007960 Simmondsia chinensis HOM05D002232 ORTHO05D002323 1.4e-07 60.1 95 40.0
Glyma.17G064800 Glycine max HOM05D002232 ORTHO05D002323 1.8e-07 59.7 78 50.0
Ciclev10009662m.g Citrus clementina HOM05D002232 ORTHO05D002323 2.4e-07 59.3 95 38.9
VMungo1215G2513 Vigna mungo HOM05D002232 ORTHO05D002323 2.4e-07 59.3 95 43.2
PSO170G0928 Papaver somniferum HOM05D002232 ORTHO05D002323 4.1e-07 58.5 78 38.5
PGSC0003DMG400018742 Solanum tuberosum HOM05D002232 ORTHO05D002323 5.3e-07 58.2 95 40.0
Phvul.003G147200 Phaseolus vulgaris HOM05D002232 ORTHO05D002323 9.1e-07 57.4 78 47.4
Solyc07g006855.2 Solanum lycopersicum HOM05D002232 ORTHO05D002323 9.1e-07 57.4 95 40.0
arahy.Tifrunner.gnm1.ann1.HUVM91 Arachis hypogaea HOM05D002232 ORTHO05D002323 1.2e-06 57.0 92 43.5
MSTRG.6206 Avicennia marina HOM05D002232 ORTHO05D002323 1.2e-06 57.0 69 49.3
Nitab4.5_0000957g0160 Nicotiana tabacum HOM05D002232 ORTHO05D002323 1.2e-06 57.0 96 33.3
Oeu009839.1 Olea europaea HOM05D002232 ORTHO05D002323 1.2e-06 57.0 93 40.9
PSO017G5806 Papaver somniferum HOM05D002232 ORTHO05D002323 1.5e-06 56.6 75 38.7
QL02p097516 Quercus lobata HOM05D002232 ORTHO05D002323 1.5e-06 56.6 105 33.3
ClCG11G012550 Citrullus lanatus HOM05D002232 ORTHO05D002323 2.0e-06 56.2 87 37.9
FAN07G1776 Fragaria x ananassa HOM05D002232 ORTHO05D002323 2.0e-06 56.2 90 37.8
TWI38G1818 Tripterygium wilfordii HOM05D002232 ORTHO05D002323 2.0e-06 56.2 92 38.0
AUR62021829 Chenopodium quinoa HOM05D002232 ORTHO05D002323 2.6e-06 55.8 92 38.0
Eucgr.C00172 Eucalyptus grandis HOM05D002232 ORTHO05D002323 2.6e-06 55.8 88 38.6
MSTRG.19698 Avicennia marina HOM05D002232 ORTHO05D002323 3.4e-06 55.5 68 44.1
Nitab4.5_0007650g0020 Nicotiana tabacum HOM05D002232 ORTHO05D002323 3.4e-06 55.5 96 33.3
ATR0580G312 Amborella trichopoda HOM05D002232 ORTHO05D002323 4.5e-06 55.1 104 34.6
MD13G1269300 Malus domestica HOM05D002232 ORTHO05D002323 4.5e-06 55.1 71 43.7
Nitab4.5_0002478g0020 Nicotiana tabacum HOM05D002232 ORTHO05D002323 5.9e-06 54.7 91 44.0
Nitab4.5_0008857g0020 Nicotiana tabacum HOM05D002232 ORTHO05D002323 5.9e-06 54.7 91 44.0
arahy.Tifrunner.gnm1.ann1.CIT971 Arachis hypogaea HOM05D002232 ORTHO05D002323 7.7e-06 54.3 92 43.5
AUR62012828 Chenopodium quinoa HOM05D002232 ORTHO05D002323 7.7e-06 54.3 92 38.0
Sed0000025 Sechium edule HOM05D002232 ORTHO05D002323 7.7e-06 54.3 105 31.4


User provided reference genes

Program Settings