Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2835 Ceratophyllum demersum HOM05D004010 ORTHO05D004995 0.0e+00 1166.8 607 100.0
Nn4g22648 Nelumbo nucifera HOM05D004010 ORTHO05D004995 1.5e-147 527.3 631 46.8
TAR371G0622 Trochodendron aralioides HOM05D004010 ORTHO05D004995 1.6e-144 517.3 631 47.1
Dinv33448 Davidia involucrata HOM05D004010 ORTHO05D004995 7.3e-142 508.4 633 47.6
GSVIVG01032418001 Vitis vinifera HOM05D004010 ORTHO05D004995 1.3e-133 481.1 633 45.7
Aqoxy3G01154 Aquilegia oxysepala HOM05D004010 ORTHO05D004995 2.1e-133 480.3 628 43.8
QL02p075066 Quercus lobata HOM05D004010 ORTHO05D004995 3.4e-131 473.0 642 44.1
Prupe.3G290300 Prunus persica HOM05D004010 ORTHO05D004995 1.1e-129 468.0 632 44.6
MD09G1028200 Malus domestica HOM05D004010 ORTHO05D004995 3.2e-129 466.5 632 44.3
TWI36G0979 Tripterygium wilfordii HOM05D004010 ORTHO05D004995 3.0e-127 459.9 633 43.4
PSO478G2834 Papaver somniferum HOM05D004010 ORTHO05D004995 7.4e-126 455.3 638 44.7
Manes.17G113000 Manihot esculenta HOM05D004010 ORTHO05D004995 9.6e-126 454.9 636 42.6
COL.COLO4_29097 Corchorus olitorius HOM05D004010 ORTHO05D004995 2.1e-125 453.8 633 42.2
Cfa007379 Carpinus fangiana HOM05D004010 ORTHO05D004995 2.8e-125 453.4 634 43.1
PSO017G0470 Papaver somniferum HOM05D004010 ORTHO05D004995 2.8e-125 453.4 634 44.6
CANSAT64G1980 Cannabis sativa HOM05D004010 ORTHO05D004995 3.7e-125 453.0 638 44.4
CiPaw.03G042500 Carya illinoinensis HOM05D004010 ORTHO05D004995 6.2e-125 452.2 633 43.4
RcHm_v2.0_Chr2g0173001 Rosa chinensis HOM05D004010 ORTHO05D004995 1.8e-124 450.7 636 44.5
Thecc.04G015900 Theobroma cacao HOM05D004010 ORTHO05D004995 3.1e-124 449.9 633 42.5
Cpa.g.sc108.59 Carica papaya HOM05D004010 ORTHO05D004995 5.3e-124 449.1 632 42.4
FAN05G5546 Fragaria x ananassa HOM05D004010 ORTHO05D004995 2.6e-123 446.8 634 43.4
MD17G1029800 Malus domestica HOM05D004010 ORTHO05D004995 1.0e-122 444.9 633 43.1
FAN14G1482 Fragaria x ananassa HOM05D004010 ORTHO05D004995 5.0e-122 442.6 634 43.1
FvH4_6g51330 Fragaria vesca HOM05D004010 ORTHO05D004995 1.2e-120 438.0 634 43.2
FAN09G4321 Fragaria x ananassa HOM05D004010 ORTHO05D004995 6.1e-120 435.6 634 42.7
Duzib187G0443 Durio zibethinus HOM05D004010 ORTHO05D004995 1.3e-119 434.5 634 41.2
Gorai.006G032700 Gossypium raimondii HOM05D004010 ORTHO05D004995 5.1e-119 432.6 633 41.5
Potri.001G346000 Populus trichocarpa HOM05D004010 ORTHO05D004995 5.1e-119 432.6 633 43.0
Lj2g0015656 Lotus japonicus HOM05D004010 ORTHO05D004995 1.3e-117 427.9 635 40.6
Solyc02g086500.3 Solanum lycopersicum HOM05D004010 ORTHO05D004995 2.2e-117 427.2 638 41.7
Sopen02g031220 Solanum pennellii HOM05D004010 ORTHO05D004995 1.1e-116 424.9 638 41.1
Eucgr.I01751 Eucalyptus grandis HOM05D004010 ORTHO05D004995 9.0e-116 421.8 633 41.4
Lsat_1_v5_gn_4_183480 Lactuca sativa HOM05D004010 ORTHO05D004995 1.2e-115 421.4 639 42.1
Rhsim10G0018100 Rhododendron simsii HOM05D004010 ORTHO05D004995 2.0e-115 420.6 696 39.4
vmacro05856 Vaccinium macrocarpon HOM05D004010 ORTHO05D004995 2.6e-115 420.2 683 39.8
Lalb_Chr24g0397171 Lupinus albus HOM05D004010 ORTHO05D004995 3.4e-115 419.9 633 39.7
CsaV3_3G042730 Cucumis sativus L. HOM05D004010 ORTHO05D004995 3.8e-114 416.4 641 41.0
TPR.G14085 Trifolium pratense HOM05D004010 ORTHO05D004995 3.8e-114 416.4 632 38.6
HanXRQChr09g0255111 Helianthus annuus HOM05D004010 ORTHO05D004995 1.9e-113 414.1 639 41.2
PGR142G3424 Punica granatum HOM05D004010 ORTHO05D004995 1.9e-113 414.1 636 40.4
VMungo0464G1595 Vigna mungo HOM05D004010 ORTHO05D004995 1.9e-113 414.1 634 39.1
Sabra16G0225700 Salix brachista HOM05D004010 ORTHO05D004995 3.2e-113 413.3 634 41.6
Actinidia36110 Actinidia chinensis HOM05D004010 ORTHO05D004995 9.4e-113 411.8 615 42.0
ECA232G4079 Erigeron canadensis HOM05D004010 ORTHO05D004995 1.2e-112 411.4 632 41.8
Sed0022234 Sechium edule HOM05D004010 ORTHO05D004995 2.7e-112 410.2 642 40.8
Phvul.004G009818 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 4.6e-112 409.5 633 39.0
Sabra16G0225000 Salix brachista HOM05D004010 ORTHO05D004995 4.6e-112 409.5 608 42.3
Cc07_g01800 Coffea canephora HOM05D004010 ORTHO05D004995 6.1e-112 409.1 636 40.3
ClCG10G013960 Citrullus lanatus HOM05D004010 ORTHO05D004995 1.0e-111 408.3 641 40.4
Glyma.19G004700 Glycine max HOM05D004010 ORTHO05D004995 1.4e-111 407.9 637 39.1
MELO3C009985.2 Cucumis melo HOM05D004010 ORTHO05D004995 6.7e-111 405.6 646 40.4
Sc03g0007550 Simmondsia chinensis HOM05D004010 ORTHO05D004995 1.1e-110 404.8 632 40.0
FAN05G3555 Fragaria x ananassa HOM05D004010 ORTHO05D004995 1.5e-110 404.4 608 42.3
arahy.Tifrunner.gnm1.ann1.TK4K1F Arachis hypogaea HOM05D004010 ORTHO05D004995 2.5e-110 403.7 647 38.2
Ca_04154_v3 Cicer arietinum L. HOM05D004010 ORTHO05D004995 2.2e-109 400.6 632 38.3
Medtr6g005010 Medicago truncatula HOM05D004010 ORTHO05D004995 6.3e-109 399.1 632 37.8
arahy.Tifrunner.gnm1.ann1.8M6LVM Arachis hypogaea HOM05D004010 ORTHO05D004995 1.4e-108 397.9 633 38.2
Hund06717 Selenicereus undatus HOM05D004010 ORTHO05D004995 2.4e-108 397.1 633 41.1
Haze_14730 Corylus avellana HOM05D004010 ORTHO05D004995 9.1e-108 395.2 644 40.5
Sp2g16800 Schrenkiella parvula HOM05D004010 ORTHO05D004995 2.2e-106 390.6 632 37.7
DCAR_001437 Daucus carota HOM05D004010 ORTHO05D004995 8.5e-106 388.7 638 39.5
THA.LOC104825324 Tarenaya hassleriana HOM05D004010 ORTHO05D004995 8.5e-106 388.7 638 37.6
AL5G17090 Arabidopsis lyrata HOM05D004010 ORTHO05D004995 1.1e-105 388.3 637 37.5
ATR1158G023 Amborella trichopoda HOM05D004010 ORTHO05D004995 2.5e-105 387.1 629 37.8
Carub.0005s0611 Capsella rubella HOM05D004010 ORTHO05D004995 4.2e-105 386.3 631 37.7
BcaC06g33789 Brassica carinata HOM05D004010 ORTHO05D004995 5.5e-105 386.0 634 38.0
C07p36860 Brassica napus HOM05D004010 ORTHO05D004995 5.5e-105 386.0 634 38.0
BolC7t44198H Brassica oleracea HOM05D004010 ORTHO05D004995 5.5e-105 386.0 634 38.0
Thhalv10003508m.g Eutrema salsugineum HOM05D004010 ORTHO05D004995 3.6e-104 383.3 632 38.0
BcaC06g30965 Brassica carinata HOM05D004010 ORTHO05D004995 4.7e-104 382.9 632 37.7
Migut.H00083 Erythranthe guttata HOM05D004010 ORTHO05D004995 4.7e-104 382.9 650 38.2
A06p40990 Brassica napus HOM05D004010 ORTHO05D004995 6.7e-103 379.0 632 37.0
CARHR149120 Cardamine hirsuta HOM05D004010 ORTHO05D004995 6.7e-103 379.0 634 37.4
BraA06t27018Z Brassica rapa HOM05D004010 ORTHO05D004995 1.5e-102 377.9 632 37.0
AT3G27670 Arabidopsis thaliana HOM05D004010 ORTHO05D004995 3.7e-101 373.2 626 37.1
Peaxi162Scf00129g01535 Petunia axillaris HOM05D004010 ORTHO05D004995 7.0e-100 369.0 616 39.3
Aa31LG2G5000 Aethionema arabicum HOM05D004010 ORTHO05D004995 9.1e-100 368.6 639 38.8
SalBow6G2090 Salvia bowleyana HOM05D004010 ORTHO05D004995 4.4e-94 349.7 703 35.8
AUR62034752 Chenopodium quinoa HOM05D004010 ORTHO05D004995 2.2e-93 347.4 641 36.8
EL10Ac4g08587 Beta vulgaris HOM05D004010 ORTHO05D004995 2.2e-90 337.4 635 36.4
AUR62043055 Chenopodium quinoa HOM05D004010 ORTHO05D004995 1.5e-86 324.7 636 35.4
SGA_v2.0_scaffold135G34899 Striga asiatica HOM05D004010 ORTHO05D004995 4.7e-80 303.1 610 35.2
SEGI_19034 Sequoiadendron giganteum HOM05D004010 ORTHO05D004995 7.7e-75 285.8 629 33.1
Gohir.D09G028100 Gossypium hirsutum HOM05D004010 ORTHO05D004995 1.5e-73 281.6 481 39.3
Nitab4.5_0006802g0030 Nicotiana tabacum HOM05D004010 ORTHO05D004995 1.6e-72 278.1 598 32.4
Ciclev10017517m.g Citrus clementina HOM05D004010 ORTHO05D004995 6.1e-72 276.2 345 45.2
Hma1.2p1_1291F.1_g273520 Hydrangea macrophylla HOM05D004010 ORTHO05D004995 1.4e-71 275.0 391 43.7
Gohir.A09G028500 Gossypium hirsutum HOM05D004010 ORTHO05D004995 2.0e-70 271.2 476 38.9
Oeu006812.1 Olea europaea HOM05D004010 ORTHO05D004995 4.4e-70 270.0 449 39.6
Lju41A39G70 Lonicera japonica HOM05D004010 ORTHO05D004995 3.7e-69 266.9 487 39.0
Psat1g055320 Pisum sativum HOM05D004010 ORTHO05D004995 3.2e-68 263.8 502 35.3
Nitab4.5_0002682g0110 Nicotiana tabacum HOM05D004010 ORTHO05D004995 2.3e-58 231.1 399 39.1
MBI10_g38112_MAGBIO Magnolia biondii HOM05D004010 ORTHO05D004995 1.3e-53 215.3 298 45.0
Os01g0169500 Oryza sativa ssp. japonica HOM05D004010 ORTHO05D004995 2.2e-53 214.5 642 30.1
MBI10_g46391_MAGBIO Magnolia biondii HOM05D004010 ORTHO05D004995 3.5e-51 207.2 290 42.1
CSS0029677 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 1.3e-50 205.3 260 46.5
Ciclev10014033m.g Citrus clementina HOM05D004010 ORTHO05D004995 3.9e-50 203.8 263 44.9
Mapoly0001s0420 Marchantia polymorpha HOM05D004010 ORTHO05D004995 1.5e-49 201.8 646 28.9
Atru.chr6.2368 Acer truncatum HOM05D004010 ORTHO05D004995 3.3e-49 200.7 208 49.5
CSS0021155 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 2.1e-48 198.0 224 46.0
Atru.chr6.2275 Acer truncatum HOM05D004010 ORTHO05D004995 6.4e-45 186.4 194 48.5
Zm00001eb123050 Zea mays HOM05D004010 ORTHO05D004995 7.1e-44 183.0 641 28.2
MBI10_g39276_MAGBIO Magnolia biondii HOM05D004010 ORTHO05D004995 9.2e-44 182.6 216 46.3
Phvul.004G009118 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 9.9e-38 162.5 243 39.5
CAN.G473.5 Capsicum annuum HOM05D004010 ORTHO05D004995 2.2e-37 161.4 148 54.1
CSS0006564 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 4.2e-36 157.1 209 44.5
Actinidia15574 Actinidia chinensis HOM05D004010 ORTHO05D004995 1.1e-31 142.5 212 39.2
MBI10_g32033_MAGBIO Magnolia biondii HOM05D004010 ORTHO05D004995 2.0e-30 138.3 137 53.3
FAN14G2166 Fragaria x ananassa HOM05D004010 ORTHO05D004995 1.3e-29 135.6 138 50.0
Ah.06g187170 Amaranthus hybridus HOM05D004010 ORTHO05D004995 4.9e-29 133.7 137 51.1
FAN05G1652 Fragaria x ananassa HOM05D004010 ORTHO05D004995 1.4e-28 132.1 252 36.9
Phvul.004G009127 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 3.9e-26 124.0 134 46.3
SMO361G0448 Selaginella moellendorffii HOM05D004010 ORTHO05D004995 4.8e-24 117.1 641 24.8
FvH4_6g51551 Fragaria vesca HOM05D004010 ORTHO05D004995 5.8e-22 110.2 127 48.0
FvH4_6g51542 Fragaria vesca HOM05D004010 ORTHO05D004995 1.1e-17 95.9 173 39.3
FAN02G4182 Fragaria x ananassa HOM05D004010 ORTHO05D004995 7.4e-17 93.2 179 38.5
HPP92_004913 Vanilla planifolia HOM05D004010 ORTHO05D004995 1.8e-15 88.6 84 51.2
FvH4_6g51541 Fragaria vesca HOM05D004010 ORTHO05D004995 3.8e-13 80.9 53 67.9
CAN.G473.4 Capsicum annuum HOM05D004010 ORTHO05D004995 2.1e-11 75.1 113 38.9
CBR_g19447 Chara braunii HOM05D004010 ORTHO05D004995 8.2e-08 63.2 249 25.7
BcaB05g24178 Brassica carinata HOM05D004010 ORTHO05D027244 4.1e-07 60.8 122 30.3
Atru.chr6.2369 Acer truncatum HOM05D004010 ORTHO05D004995 5.3e-07 60.5 108 36.1


User provided reference genes

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