Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2824 Ceratophyllum demersum HOM05D003983 ORTHO05D004562 1.1e-53 213.0 104 100.0
CDE11G0429 Ceratophyllum demersum HOM05D003983 ORTHO05D004562 4.3e-50 201.1 104 93.3
Manes.15G137900 Manihot esculenta HOM05D003983 ORTHO05D004562 1.3e-43 179.5 100 82.0
AL1G40150 Arabidopsis lyrata HOM05D003983 ORTHO05D004562 5.1e-43 177.6 100 82.0
Aa31LG7G9320 Aethionema arabicum HOM05D003983 ORTHO05D004562 6.6e-43 177.2 102 81.4
AT5G57890 Arabidopsis thaliana HOM05D003983 ORTHO05D004562 1.9e-42 175.6 100 81.0
Carub.0001s2535 Capsella rubella HOM05D003983 ORTHO05D004562 1.9e-42 175.6 100 81.0
Atru.chr11.745 Acer truncatum HOM05D003983 ORTHO05D004562 3.3e-42 174.9 99 82.8
AT1G25220 Arabidopsis thaliana HOM05D003983 ORTHO05D004562 4.3e-42 174.5 100 79.0
THA.LOC104809791 Tarenaya hassleriana HOM05D003983 ORTHO05D004562 4.3e-42 174.5 104 81.7
AL5G11470 Arabidopsis lyrata HOM05D003983 ORTHO05D004562 5.6e-42 174.1 100 81.0
CANSAT78G2066 Cannabis sativa HOM05D003983 ORTHO05D004562 5.6e-42 174.1 100 81.0
AL4G18740 Arabidopsis lyrata HOM05D003983 ORTHO05D004562 7.3e-42 173.7 100 79.0
Lalb_Chr12g0209351 Lupinus albus HOM05D003983 ORTHO05D004562 7.3e-42 173.7 100 80.0
AT1G24807 Arabidopsis thaliana HOM05D003983 ORTHO05D004562 9.6e-42 173.3 100 78.0
AT1G24909 Arabidopsis thaliana HOM05D003983 ORTHO05D004562 9.6e-42 173.3 100 78.0
AT1G25083 Arabidopsis thaliana HOM05D003983 ORTHO05D004562 9.6e-42 173.3 100 78.0
AT1G25155 Arabidopsis thaliana HOM05D003983 ORTHO05D004562 9.6e-42 173.3 100 78.0
Thhalv10008447m.g Eutrema salsugineum HOM05D003983 ORTHO05D004562 9.6e-42 173.3 100 79.0
GSVIVG01011602001 Vitis vinifera HOM05D003983 ORTHO05D004562 9.6e-42 173.3 100 79.0
BcaB03g12041 Brassica carinata HOM05D003983 ORTHO05D004562 1.3e-41 172.9 100 79.0
Potri.008G138800 Populus trichocarpa HOM05D003983 ORTHO05D004562 1.3e-41 172.9 100 78.0
Sabra08G0105500 Salix brachista HOM05D003983 ORTHO05D004562 2.1e-41 172.2 100 78.0
Prupe.1G337100 Prunus persica HOM05D003983 ORTHO05D004562 2.8e-41 171.8 100 81.0
BcaC05g26495 Brassica carinata HOM05D003983 ORTHO05D004562 3.6e-41 171.4 100 78.0
A08p26790 Brassica napus HOM05D003983 ORTHO05D004562 3.6e-41 171.4 100 78.0
A09p39040 Brassica napus HOM05D003983 ORTHO05D004562 3.6e-41 171.4 100 78.0
C03p73170 Brassica napus HOM05D003983 ORTHO05D004562 3.6e-41 171.4 100 78.0
C05p25470 Brassica napus HOM05D003983 ORTHO05D004562 3.6e-41 171.4 100 78.0
BraA08t34625Z Brassica rapa HOM05D003983 ORTHO05D004562 3.6e-41 171.4 100 78.0
BraA09t39404Z Brassica rapa HOM05D003983 ORTHO05D004562 3.6e-41 171.4 100 78.0
CARHR026340 Cardamine hirsuta HOM05D003983 ORTHO05D004562 3.6e-41 171.4 100 78.0
Gohir.A12G154000 Gossypium hirsutum HOM05D003983 ORTHO05D004562 3.6e-41 171.4 98 82.7
Nn4g24498 Nelumbo nucifera HOM05D003983 ORTHO05D004562 3.6e-41 171.4 101 78.2
Sp1g23070 Schrenkiella parvula HOM05D003983 ORTHO05D004562 3.6e-41 171.4 100 78.0
Gohir.D12G157100 Gossypium hirsutum HOM05D003983 ORTHO05D004562 4.8e-41 171.0 98 82.7
Gorai.008G169900 Gossypium raimondii HOM05D003983 ORTHO05D004562 4.8e-41 171.0 98 82.7
Potri.010G102200 Populus trichocarpa HOM05D003983 ORTHO05D004562 4.8e-41 171.0 100 77.0
BcaC01g01671 Brassica carinata HOM05D003983 ORTHO05D004562 1.1e-40 169.9 100 77.0
BolC3t19615H Brassica oleracea HOM05D003983 ORTHO05D004562 1.1e-40 169.9 100 77.0
ClCG07G006850 Citrullus lanatus HOM05D003983 ORTHO05D004562 1.1e-40 169.9 103 76.7
Lalb_Chr07g0187831 Lupinus albus HOM05D003983 ORTHO05D004562 1.1e-40 169.9 99 79.8
MD13G1016400 Malus domestica HOM05D003983 ORTHO05D004562 1.1e-40 169.9 100 80.0
BolC5t31275H Brassica oleracea HOM05D003983 ORTHO05D004562 1.4e-40 169.5 100 77.0
CiPaw.06G059200 Carya illinoinensis HOM05D003983 ORTHO05D004562 2.4e-40 168.7 100 77.0
MD16G1013900 Malus domestica HOM05D003983 ORTHO05D004562 2.4e-40 168.7 100 79.0
Sed0000196 Sechium edule HOM05D003983 ORTHO05D004562 2.4e-40 168.7 101 75.2
Thecc.02G305000 Theobroma cacao HOM05D003983 ORTHO05D004562 4.0e-40 167.9 99 79.8
MELO3C018290.2 Cucumis melo HOM05D003983 ORTHO05D004562 5.3e-40 167.5 103 73.8
Duzib268G0992 Durio zibethinus HOM05D003983 ORTHO05D004562 5.3e-40 167.5 99 80.8
Peaxi162Scf00062g00418 Petunia axillaris HOM05D003983 ORTHO05D004562 5.3e-40 167.5 98 79.6
FAN17G0269 Fragaria x ananassa HOM05D003983 ORTHO05D004562 6.9e-40 167.2 100 77.0
Solyc12g010180.2 Solanum lycopersicum HOM05D003983 ORTHO05D004562 6.9e-40 167.2 98 81.6
CsaV3_5G015330 Cucumis sativus L. HOM05D003983 ORTHO05D004562 9.0e-40 166.8 103 73.8
arahy.Tifrunner.gnm1.ann1.H0K2UA Arachis hypogaea HOM05D003983 ORTHO05D004562 1.2e-39 166.4 108 75.0
arahy.Tifrunner.gnm1.ann1.L1YRVI Arachis hypogaea HOM05D003983 ORTHO05D004562 1.2e-39 166.4 108 75.0
Cpa.g.sc2.136 Carica papaya HOM05D003983 ORTHO05D004562 1.2e-39 166.4 100 76.0
COL.COLO4_27591 Corchorus olitorius HOM05D003983 ORTHO05D004562 1.2e-39 166.4 99 81.8
Glyma.16G058800 Glycine max HOM05D003983 ORTHO05D004562 1.2e-39 166.4 99 77.8
BcaC05g26695 Brassica carinata HOM05D003983 ORTHO05D004562 1.5e-39 166.0 96 79.2
Nitab4.5_0001478g0080 Nicotiana tabacum HOM05D003983 ORTHO05D004562 1.5e-39 166.0 98 77.6
FAN22G1456 Fragaria x ananassa HOM05D003983 ORTHO05D004562 2.0e-39 165.6 100 76.0
Sopen12g005050 Solanum pennellii HOM05D003983 ORTHO05D004562 2.0e-39 165.6 98 80.6
RcHm_v2.0_Chr3g0486701 Rosa chinensis HOM05D003983 ORTHO05D004562 2.6e-39 165.2 100 76.0
RcHm_v2.0_Chr3g0486721 Rosa chinensis HOM05D003983 ORTHO05D004562 2.6e-39 165.2 100 76.0
RcHm_v2.0_Chr4g0388431 Rosa chinensis HOM05D003983 ORTHO05D004562 2.6e-39 165.2 100 76.0
CAN.G551.33 Capsicum annuum HOM05D003983 ORTHO05D004562 3.4e-39 164.9 100 76.0
ClCG07G006870 Citrullus lanatus HOM05D003983 ORTHO05D004562 3.4e-39 164.9 103 74.8
SGA_v2.0_scaffold23G10117 Striga asiatica HOM05D003983 ORTHO05D004562 3.4e-39 164.9 100 76.0
BcaC06g35239 Brassica carinata HOM05D003983 ORTHO05D004562 4.5e-39 164.5 103 74.8
ATR0598G020 Amborella trichopoda HOM05D003983 ORTHO05D004562 5.8e-39 164.1 101 75.2
FvH4_4g33060 Fragaria vesca HOM05D003983 ORTHO05D004562 5.8e-39 164.1 100 75.0
FAN07G1936 Fragaria x ananassa HOM05D003983 ORTHO05D004562 5.8e-39 164.1 100 75.0
FAN12G1558 Fragaria x ananassa HOM05D003983 ORTHO05D004562 5.8e-39 164.1 100 75.0
arahy.Tifrunner.gnm1.ann1.2I20T3 Arachis hypogaea HOM05D003983 ORTHO05D004562 7.6e-39 163.7 108 73.1
Ca_29558_v3 Cicer arietinum L. HOM05D003983 ORTHO05D004562 7.6e-39 163.7 99 75.8
Ciclev10016176m.g Citrus clementina HOM05D003983 ORTHO05D004562 7.6e-39 163.7 99 76.8
Phvul.003G014300 Phaseolus vulgaris HOM05D003983 ORTHO05D004562 7.6e-39 163.7 99 77.8
QL03p038834 Quercus lobata HOM05D003983 ORTHO05D004562 7.6e-39 163.7 100 77.0
Duzib248G0975 Durio zibethinus HOM05D003983 ORTHO05D004562 9.9e-39 163.3 99 78.8
Medtr1g033480 Medicago truncatula HOM05D003983 ORTHO05D004562 9.9e-39 163.3 99 74.7
Hma1.2p1_0037F.1_g023780 Hydrangea macrophylla HOM05D003983 ORTHO05D004562 1.3e-38 162.9 100 77.0
Manes.17G087200 Manihot esculenta HOM05D003983 ORTHO05D004562 1.3e-38 162.9 100 76.0
VMungo1215G1104 Vigna mungo HOM05D003983 ORTHO05D004562 1.3e-38 162.9 98 78.6
Lj2g0017484 Lotus japonicus HOM05D003983 ORTHO05D004562 1.7e-38 162.5 99 75.8
TAR622G0111 Trochodendron aralioides HOM05D003983 ORTHO05D004562 1.7e-38 162.5 99 73.7
Cfa015064 Carpinus fangiana HOM05D003983 ORTHO05D004562 2.9e-38 161.8 100 75.0
PSO675G6890 Papaver somniferum HOM05D003983 ORTHO05D004562 2.9e-38 161.8 99 73.7
TPR.G34556 Trifolium pratense HOM05D003983 ORTHO05D004562 2.9e-38 161.8 99 74.7
Gohir.A03G112800 Gossypium hirsutum HOM05D003983 ORTHO05D004562 3.8e-38 161.4 99 76.8
Aqoxy3G04109 Aquilegia oxysepala HOM05D003983 ORTHO05D004562 4.9e-38 161.0 100 71.0
Ca_26339_v3 Cicer arietinum L. HOM05D003983 ORTHO05D004562 4.9e-38 161.0 99 74.7
Gorai.005G153300 Gossypium raimondii HOM05D003983 ORTHO05D004562 4.9e-38 161.0 99 76.8
Dinv14372 Davidia involucrata HOM05D003983 ORTHO05D004562 6.4e-38 160.6 100 76.0
Gohir.D02G137151 Gossypium hirsutum HOM05D003983 ORTHO05D004562 6.4e-38 160.6 99 76.8
PSO339G3678 Papaver somniferum HOM05D003983 ORTHO05D004562 6.4e-38 160.6 100 71.0
PSO356G0033 Papaver somniferum HOM05D003983 ORTHO05D004562 6.4e-38 160.6 99 72.7
TWI74G1079 Tripterygium wilfordii HOM05D003983 ORTHO05D004562 6.4e-38 160.6 98 77.6
Dinv05685 Davidia involucrata HOM05D003983 ORTHO05D004562 1.1e-37 159.8 100 75.0
Lj6A732T67 Lonicera japonica HOM05D003983 ORTHO05D004562 1.1e-37 159.8 98 76.5
Eucgr.A00016 Eucalyptus grandis HOM05D003983 ORTHO05D004562 1.4e-37 159.5 100 73.0
Nitab4.5_0002315g0030 Nicotiana tabacum HOM05D003983 ORTHO05D004562 1.4e-37 159.5 98 75.5
SEGI_15310 Sequoiadendron giganteum HOM05D003983 ORTHO05D004562 1.4e-37 159.5 100 71.0
BcaB03g14021 Brassica carinata HOM05D001297 ORTHO05D001135 1.9e-37 159.1 103 72.8
Oeu044076.2 Olea europaea HOM05D003983 ORTHO05D004562 1.9e-37 159.1 100 73.0
PGR102G0108 Punica granatum HOM05D003983 ORTHO05D004562 2.4e-37 158.7 130 59.2
SalBow5G2331 Salvia bowleyana HOM05D003983 ORTHO05D004562 3.2e-37 158.3 100 74.0
SalBow5G2576 Salvia bowleyana HOM05D003983 ORTHO05D004562 3.2e-37 158.3 100 74.0
HanXRQChr12g0366151 Helianthus annuus HOM05D003983 ORTHO05D004562 4.2e-37 157.9 99 76.8
Cc11_g05880 Coffea canephora HOM05D003983 ORTHO05D004562 5.4e-37 157.5 100 75.0
ECA233G0760 Erigeron canadensis HOM05D003983 ORTHO05D004562 5.4e-37 157.5 99 75.8
TWI56G0668 Tripterygium wilfordii HOM05D003983 ORTHO05D004562 5.4e-37 157.5 100 75.0
Zm00001eb080510 Zea mays HOM05D003983 ORTHO05D004562 5.4e-37 157.5 100 71.0
Zm00001eb424380 Zea mays HOM05D003983 ORTHO05D004562 5.4e-37 157.5 100 71.0
ECA246G0293 Erigeron canadensis HOM05D003983 ORTHO05D004562 7.1e-37 157.1 99 75.8
ATR0100G040 Amborella trichopoda HOM05D003983 ORTHO05D004562 9.3e-37 156.8 101 71.3
MSTRG.13642 Avicennia marina HOM05D003983 ORTHO05D004562 9.3e-37 156.8 99 74.7
Rhsim09G0086300 Rhododendron simsii HOM05D003983 ORTHO05D004562 9.3e-37 156.8 100 75.0
Actinidia12430 Actinidia chinensis HOM05D003983 ORTHO05D004562 2.7e-36 155.2 100 74.0
CSS0004353 Camellia sinensis var. sinensis HOM05D003983 ORTHO05D004562 2.7e-36 155.2 98 75.5
Cc00_g17040 Coffea canephora HOM05D003983 ORTHO05D004562 2.7e-36 155.2 100 73.0
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 7.9e-36 153.7 95 74.7
Mapoly0037s0136 Marchantia polymorpha HOM05D003983 ORTHO05D004562 7.9e-36 153.7 96 69.8
HanXRQChr08g0224861 Helianthus annuus HOM05D003983 ORTHO05D004562 1.3e-35 152.9 99 73.7
Ah.04g149470 Amaranthus hybridus HOM05D003983 ORTHO05D004562 1.8e-35 152.5 99 70.7
Lj3C860T0 Lonicera japonica HOM05D003983 ORTHO05D004562 3.0e-35 151.8 100 72.0
Os04g0463500 Oryza sativa ssp. japonica HOM05D003983 ORTHO05D004562 3.0e-35 151.8 100 68.0
Migut.E00508 Erythranthe guttata HOM05D003983 ORTHO05D004562 5.1e-35 151.0 100 72.0
Hund19014 Selenicereus undatus HOM05D003983 ORTHO05D004562 8.7e-35 150.2 95 71.6
AUR62018550 Chenopodium quinoa HOM05D003983 ORTHO05D004562 1.1e-34 149.8 95 73.7
AUR62020869 Chenopodium quinoa HOM05D003983 ORTHO05D004562 1.1e-34 149.8 95 73.7
EL10Ac3g07448 Beta vulgaris HOM05D003983 ORTHO05D004562 7.4e-34 147.1 95 70.5
Os03g0718000 Oryza sativa ssp. japonica HOM05D003983 ORTHO05D004562 7.4e-34 147.1 99 68.7
SMO358G0613 Selaginella moellendorffii HOM05D003983 ORTHO05D004562 7.4e-34 147.1 101 65.3
Glyma.07G175000 Glycine max HOM05D003983 ORTHO05D004562 9.6e-34 146.7 83 79.5
Pp3c3_33470 Physcomitrium patens HOM05D003983 ORTHO05D004562 1.6e-33 146.0 99 65.7
unitig_699.g19470 Utricularia gibba HOM05D003983 ORTHO05D004562 2.8e-33 145.2 99 71.7
Lsat_1_v5_gn_8_34800 Lactuca sativa HOM05D003983 ORTHO05D004562 6.2e-33 144.1 101 69.3
Zm00001eb066090 Zea mays HOM05D003983 ORTHO05D004562 6.2e-33 144.1 124 58.1
Pp3c10_17060 Physcomitrium patens HOM05D003983 ORTHO05D004562 2.0e-31 139.0 99 62.6
Zm00001eb055320 Zea mays HOM05D003983 ORTHO05D004562 2.6e-31 138.7 99 65.7
BolC7t42345H Brassica oleracea HOM05D003983 ORTHO05D004562 7.6e-31 137.1 86 74.4
RcHm_v2.0_Chr4g0388381 Rosa chinensis HOM05D003983 ORTHO05D004562 1.4e-29 132.9 83 73.5
RcHm_v2.0_Chr4g0388411 Rosa chinensis HOM05D003983 ORTHO05D004562 1.4e-29 132.9 83 73.5
TAR629G3105 Trochodendron aralioides HOM05D003983 ORTHO05D004562 5.5e-29 131.0 82 74.4
Cre14.g620300 Chlamydomonas reinhardtii HOM05D003983 ORTHO05D004562 1.0e-27 126.7 94 64.9
C07p18350 Brassica napus HOM05D003983 ORTHO05D004562 1.3e-27 126.3 82 72.0
Ciclev10030118m.g Citrus clementina HOM05D003983 ORTHO05D004562 1.1e-26 123.2 78 73.1
AagrBONN_evm.TU.Sc2ySwM_362.1213 Anthoceros agrestis HOM05D003983 ORTHO05D004562 1.5e-26 122.9 124 51.6
Haze_10827 Corylus avellana HOM05D003983 ORTHO05D004562 1.5e-26 122.9 70 78.6
Sc08g0003180 Simmondsia chinensis HOM05D003983 ORTHO05D004562 1.5e-26 122.9 96 66.7
MCO13G279 Micromonas commoda HOM05D003983 ORTHO05D004562 9.6e-26 120.2 94 58.5
QL03p038897 Quercus lobata HOM05D003983 ORTHO05D004562 2.8e-25 118.6 69 79.7
Gohir.D13G028101 Gossypium hirsutum HOM05D003983 ORTHO05D004562 2.4e-24 115.5 97 60.8
Ciclev10030067m.g Citrus clementina HOM05D003983 ORTHO05D004562 5.3e-24 114.4 70 74.3
AL5G19970 Arabidopsis lyrata HOM05D003983 ORTHO05D004562 9.0e-24 113.6 70 75.7
Gorai.013G032100 Gossypium raimondii HOM05D003983 ORTHO05D004562 1.5e-23 112.8 97 58.8
CARHR028690 Cardamine hirsuta HOM05D003983 ORTHO05D004562 4.2e-21 104.8 91 58.2
MBI19_g25215_MAGBIO Magnolia biondii HOM05D003983 ORTHO05D004562 1.0e-19 100.1 79 63.3
Zm00001eb232460 Zea mays HOM05D003983 ORTHO05D004562 2.3e-19 99.0 67 67.2
PRCOL_00000049 Prasinoderma coloniale HOM05D003983 ORTHO05D004562 5.7e-18 94.4 95 49.5
Cfa025268 Carpinus fangiana HOM05D003366 ORTHO05D004562 2.7e-12 75.5 97 41.2
RcHm_v2.0_Chr4g0442111 Rosa chinensis HOM05D003983 ORTHO05D004562 1.8e-11 72.8 43 76.7
SMO358G0246 Selaginella moellendorffii HOM05D003983 ORTHO05D004562 3.0e-11 72.0 57 57.9
SMO194G0036 Selaginella moellendorffii HOM05D003983 ORTHO05D004562 2.0e-10 69.3 57 57.9
PRCOL_00000505 Prasinoderma coloniale HOM05D004788 ORTHO05D006465 7.4e-10 67.4 95 42.1
HanXRQChr08g0208591 Helianthus annuus HOM05D004788 ORTHO05D006465 5.3e-08 61.2 93 39.8
Oeu043947.4 Olea europaea HOM05D004788 ORTHO05D006465 1.5e-07 59.7 122 36.1
PSO063G3786 Papaver somniferum HOM05D004788 ORTHO05D006465 2.6e-07 58.9 118 36.4
PSO170G4427 Papaver somniferum HOM05D004788 ORTHO05D006465 2.6e-07 58.9 118 36.4
GSVIVG01016290001 Vitis vinifera HOM05D004788 ORTHO05D006465 2.6e-07 58.9 105 40.0
CSS0028648 Camellia sinensis var. sinensis HOM05D004788 ORTHO05D006465 3.4e-07 58.5 117 34.2
Ca_28977_v3 Cicer arietinum L. HOM05D003983 ORTHO05D004562 1.3e-06 56.6 67 43.3
GSVIVG01016291001 Vitis vinifera HOM05D004788 ORTHO05D006465 1.7e-06 56.2 120 36.7
Lsat_1_v5_gn_4_181581 Lactuca sativa HOM05D004788 ORTHO05D006465 3.8e-06 55.1 120 32.5
SMO356G0457 Selaginella moellendorffii HOM05D004788 ORTHO05D006465 3.8e-06 55.1 98 34.7
Pp3c26_2070 Physcomitrium patens HOM05D004788 ORTHO05D006465 8.5e-06 53.9 105 35.2


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