Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2817 Ceratophyllum demersum HOM05D005048 ORTHO05D006420 1.7e-75 285.8 137 100.0
TAR383G0565 Trochodendron aralioides HOM05D005048 ORTHO05D006420 9.7e-50 200.3 112 83.9
MD15G1191500 Malus domestica HOM05D005048 ORTHO05D006420 1.4e-48 196.4 115 79.1
Cfa003227 Carpinus fangiana HOM05D005048 ORTHO05D006420 1.8e-48 196.1 112 81.2
Aqoxy5G01302 Aquilegia oxysepala HOM05D005048 ORTHO05D006420 3.1e-48 195.3 112 81.2
ECA240G4205 Erigeron canadensis HOM05D005048 ORTHO05D006420 3.1e-48 195.3 107 85.0
GSVIVG01015352001 Vitis vinifera HOM05D005048 ORTHO05D006420 3.1e-48 195.3 112 81.2
HanXRQChr03g0061391 Helianthus annuus HOM05D005048 ORTHO05D006420 5.3e-48 194.5 112 80.4
Phvul.002G311600 Phaseolus vulgaris HOM05D005048 ORTHO05D006420 5.3e-48 194.5 112 79.5
Potri.017G118801 Populus trichocarpa HOM05D005048 ORTHO05D006420 5.3e-48 194.5 112 79.5
Glyma.05G229400 Glycine max HOM05D005048 ORTHO05D006420 6.9e-48 194.1 112 80.4
MD02G1057100 Malus domestica HOM05D005048 ORTHO05D006420 6.9e-48 194.1 112 81.2
Ciclev10008139m.g Citrus clementina HOM05D005048 ORTHO05D006420 9.0e-48 193.7 112 79.5
Hma1.2p1_1151F.1_g261870 Hydrangea macrophylla HOM05D005048 ORTHO05D006420 9.0e-48 193.7 112 80.4
QL10p015858 Quercus lobata HOM05D005048 ORTHO05D006420 9.0e-48 193.7 112 79.5
Lsat_1_v5_gn_7_41421 Lactuca sativa HOM05D005048 ORTHO05D006420 1.2e-47 193.4 112 81.2
arahy.Tifrunner.gnm1.ann1.T6QICJ Arachis hypogaea HOM05D005048 ORTHO05D006420 1.5e-47 193.0 112 79.5
arahy.Tifrunner.gnm1.ann1.TTP0Q7 Arachis hypogaea HOM05D005048 ORTHO05D006420 1.5e-47 193.0 112 79.5
Manes.14G158111 Manihot esculenta HOM05D005048 ORTHO05D006420 1.5e-47 193.0 112 79.5
Aqoxy1G00313 Aquilegia oxysepala HOM05D005048 ORTHO05D006420 2.0e-47 192.6 112 79.5
Sed0003567 Sechium edule HOM05D005048 ORTHO05D006420 2.0e-47 192.6 112 80.4
CiPaw.04G161700 Carya illinoinensis HOM05D005048 ORTHO05D006420 2.6e-47 192.2 112 79.5
RcHm_v2.0_Chr2g0091251 Rosa chinensis HOM05D005048 ORTHO05D006420 2.6e-47 192.2 112 80.4
Lj4g0020985 Lotus japonicus HOM05D005048 ORTHO05D006420 3.4e-47 191.8 110 80.0
Actinidia32670 Actinidia chinensis HOM05D005048 ORTHO05D006420 4.5e-47 191.4 112 78.6
Dinv41630 Davidia involucrata HOM05D005048 ORTHO05D006420 4.5e-47 191.4 110 80.9
Sabra17G0098100 Salix brachista HOM05D005048 ORTHO05D006420 4.5e-47 191.4 112 78.6
Nn2g11663 Nelumbo nucifera HOM05D005048 ORTHO05D006420 5.9e-47 191.0 112 80.4
TWI60G0019 Tripterygium wilfordii HOM05D005048 ORTHO05D006420 5.9e-47 191.0 113 77.9
Ca_17323_v3 Cicer arietinum L. HOM05D005048 ORTHO05D006420 7.7e-47 190.7 112 79.5
Dinv36669 Davidia involucrata HOM05D005048 ORTHO05D006420 7.7e-47 190.7 112 78.6
Sc08g0007680 Simmondsia chinensis HOM05D005048 ORTHO05D006420 7.7e-47 190.7 110 77.3
Glyma.14G218300 Glycine max HOM05D005048 ORTHO05D006420 1.0e-46 190.3 112 79.5
DCAR_009632 Daucus carota HOM05D005048 ORTHO05D006420 1.3e-46 189.9 112 78.6
Lalb_Chr05g0223041 Lupinus albus HOM05D005048 ORTHO05D006420 1.3e-46 189.9 112 78.6
TPR.G23489 Trifolium pratense HOM05D005048 ORTHO05D006420 1.3e-46 189.9 112 79.5
ATR0315G096 Amborella trichopoda HOM05D005048 ORTHO05D006420 1.7e-46 189.5 112 78.6
FAN23G2083 Fragaria x ananassa HOM05D005048 ORTHO05D006420 1.7e-46 189.5 112 79.5
FAN26G3268 Fragaria x ananassa HOM05D005048 ORTHO05D006420 1.7e-46 189.5 112 79.5
Aa31LG2G18290 Aethionema arabicum HOM05D005048 ORTHO05D006420 3.8e-46 188.3 112 75.9
Medtr8g103060 Medicago truncatula HOM05D005048 ORTHO05D006420 3.8e-46 188.3 112 77.7
THA.LOC104799066 Tarenaya hassleriana HOM05D005048 ORTHO05D006420 3.8e-46 188.3 112 77.7
FAN28G0981 Fragaria x ananassa HOM05D005048 ORTHO05D006420 5.0e-46 188.0 113 77.9
Haze_25781 Corylus avellana HOM05D005048 ORTHO05D006420 6.5e-46 187.6 121 75.2
Sp7g30130 Schrenkiella parvula HOM05D005048 ORTHO05D006420 8.5e-46 187.2 112 75.9
Carub.0007s0821 Capsella rubella HOM05D005048 ORTHO05D006420 1.1e-45 186.8 112 75.0
CARHR240270 Cardamine hirsuta HOM05D005048 ORTHO05D006420 1.1e-45 186.8 112 76.8
Eucgr.C03804 Eucalyptus grandis HOM05D005048 ORTHO05D006420 1.1e-45 186.8 112 78.6
FAN19G2567 Fragaria x ananassa HOM05D005048 ORTHO05D006420 1.1e-45 186.8 112 78.6
SEGI_35536 Sequoiadendron giganteum HOM05D005048 ORTHO05D006420 1.1e-45 186.8 112 73.2
AT4G32360 Arabidopsis thaliana HOM05D005048 ORTHO05D006420 1.4e-45 186.4 112 75.9
EL10Ac8g18435 Beta vulgaris HOM05D005048 ORTHO05D006420 1.4e-45 186.4 112 74.1
Cc01_g04910 Coffea canephora HOM05D005048 ORTHO05D006420 1.4e-45 186.4 112 77.7
FvH4_1g05550 Fragaria vesca HOM05D005048 ORTHO05D006420 1.4e-45 186.4 112 77.7
Prupe.7G225700 Prunus persica HOM05D005048 ORTHO05D006420 1.4e-45 186.4 112 77.7
BraSC35t45995Z Brassica rapa HOM05D005048 ORTHO05D006420 1.9e-45 186.0 112 75.0
MELO3C006282.2 Cucumis melo HOM05D005048 ORTHO05D006420 1.9e-45 186.0 112 76.8
Ah.14g082380 Amaranthus hybridus HOM05D005048 ORTHO05D006420 2.5e-45 185.7 112 75.0
TWI81G0001 Tripterygium wilfordii HOM05D005048 ORTHO05D006420 2.5e-45 185.7 112 77.7
Os02g0277600 Oryza sativa ssp. japonica HOM05D005048 ORTHO05D006420 3.2e-45 185.3 111 74.8
Hund09223 Selenicereus undatus HOM05D005048 ORTHO05D006420 3.2e-45 185.3 112 75.9
BcaC04g20784 Brassica carinata HOM05D005048 ORTHO05D006420 4.2e-45 184.9 112 74.1
C09p39250 Brassica napus HOM05D005048 ORTHO05D006420 4.2e-45 184.9 112 74.1
BolC9t56804H Brassica oleracea HOM05D005048 ORTHO05D006420 4.2e-45 184.9 112 74.1
CsaV3_3G010630 Cucumis sativus L. HOM05D005048 ORTHO05D006420 4.2e-45 184.9 125 71.2
Thhalv10013379m.g Eutrema salsugineum HOM05D005048 ORTHO05D006420 4.2e-45 184.9 111 75.7
AL7G19480 Arabidopsis lyrata HOM05D005048 ORTHO05D006420 5.5e-45 184.5 112 75.0
BcaB08g35458 Brassica carinata HOM05D005048 ORTHO05D006420 5.5e-45 184.5 112 74.1
A10p08040 Brassica napus HOM05D005048 ORTHO05D006420 5.5e-45 184.5 112 74.1
PSO210G2605 Papaver somniferum HOM05D005048 ORTHO05D006420 5.5e-45 184.5 112 75.0
Migut.D01920 Erythranthe guttata HOM05D005048 ORTHO05D006420 9.4e-45 183.7 112 75.0
Gorai.001G007100 Gossypium raimondii HOM05D005048 ORTHO05D006420 9.4e-45 183.7 112 75.0
SGA_v2.0_scaffold58G20419 Striga asiatica HOM05D005048 ORTHO05D006420 9.4e-45 183.7 112 75.0
Lj7C657T3 Lonicera japonica HOM05D005048 ORTHO05D006420 1.2e-44 183.3 119 74.8
SalBow2G2764 Salvia bowleyana HOM05D005048 ORTHO05D006420 1.6e-44 183.0 110 74.5
PGSC0003DMG400018273 Solanum tuberosum HOM05D005048 ORTHO05D006420 1.6e-44 183.0 110 77.3
Solyc01g102490.3 Solanum lycopersicum HOM05D005048 ORTHO05D006420 2.1e-44 182.6 110 76.4
Sopen01g044930 Solanum pennellii HOM05D005048 ORTHO05D006420 2.1e-44 182.6 110 77.3
Oeu026966.2 Olea europaea HOM05D005048 ORTHO05D006420 2.7e-44 182.2 110 73.6
HPP92_003926 Vanilla planifolia HOM05D005048 ORTHO05D006420 2.7e-44 182.2 109 76.1
Gohir.D07G007400 Gossypium hirsutum HOM05D005048 ORTHO05D006420 3.6e-44 181.8 112 74.1
PGR102G2767 Punica granatum HOM05D005048 ORTHO05D006420 3.6e-44 181.8 110 76.4
CAN.G1379.35 Capsicum annuum HOM05D005048 ORTHO05D006420 6.1e-44 181.0 112 75.0
Thecc.09G106000 Theobroma cacao HOM05D005048 ORTHO05D006420 6.1e-44 181.0 110 73.6
Gohir.A07G004800 Gossypium hirsutum HOM05D005048 ORTHO05D006420 1.0e-43 180.3 112 74.1
unitig_0.g799 Utricularia gibba HOM05D005048 ORTHO05D006420 1.0e-43 180.3 113 74.3
Mapoly0125s0046 Marchantia polymorpha HOM05D005048 ORTHO05D006420 1.4e-43 179.9 112 70.5
Cpa.g.sc23.64 Carica papaya HOM05D005048 ORTHO05D006420 1.8e-43 179.5 112 73.2
Duzib168G1040 Durio zibethinus HOM05D005048 ORTHO05D006420 3.0e-43 178.7 110 73.6
Zm00001eb203380 Zea mays HOM05D005048 ORTHO05D006420 3.0e-43 178.7 111 73.9
AagrBONN_evm.TU.Sc2ySwM_344.4229 Anthoceros agrestis HOM05D005048 ORTHO05D006420 3.9e-43 178.3 107 74.8
Rhsim03G0239600 Rhododendron simsii HOM05D005048 ORTHO05D006420 6.7e-43 177.6 121 71.1
Nitab4.5_0004090g0040 Nicotiana tabacum HOM05D005048 ORTHO05D006420 1.1e-42 176.8 106 76.4
Nitab4.5_0000399g0090 Nicotiana tabacum HOM05D005048 ORTHO05D006420 2.5e-42 175.6 112 73.2
Pp3c9_14820 Physcomitrium patens HOM05D005048 ORTHO05D006420 2.5e-42 175.6 107 73.8
SHI02718 Sapria himalayana HOM05D005048 ORTHO05D006420 2.5e-42 175.6 109 74.3
vmacro06232 Vaccinium macrocarpon HOM05D005048 ORTHO05D006420 7.4e-42 174.1 119 70.6
ClCG05G003020 Citrullus lanatus HOM05D005048 ORTHO05D006420 9.7e-42 173.7 120 70.0
SMO361G0652 Selaginella moellendorffii HOM05D005048 ORTHO05D006420 9.7e-42 173.7 110 70.0
VMungo0251G3001 Vigna mungo HOM05D005048 ORTHO05D006420 2.6e-39 165.6 175 50.3
COL.COLO4_37106 Corchorus olitorius HOM05D005048 ORTHO05D006420 3.8e-38 161.8 139 59.0
MBI01_g28841_MAGBIO Magnolia biondii HOM05D005048 ORTHO05D006420 3.8e-38 161.8 94 83.0
MBI01_g29840_MAGBIO Magnolia biondii HOM05D005048 ORTHO05D006420 3.8e-38 161.8 94 83.0
CBR_g50003 Chara braunii HOM05D005048 ORTHO05D006420 5.5e-37 157.9 106 64.2
Zm00001eb203390 Zea mays HOM05D005048 ORTHO05D006420 6.7e-35 151.0 91 78.0
Zm00001eb203400 Zea mays HOM05D005048 ORTHO05D006420 6.7e-35 151.0 91 78.0
Cre13.g562550 Chlamydomonas reinhardtii HOM05D005048 ORTHO05D006420 3.3e-34 148.7 113 59.3
Duzib150G0221 Durio zibethinus HOM05D005048 ORTHO05D006420 7.2e-29 131.0 93 67.7
Haze_26375 Corylus avellana HOM05D005048 ORTHO05D006420 8.0e-28 127.5 107 57.0
Cfa027289 Carpinus fangiana HOM05D005048 ORTHO05D006420 3.0e-27 125.6 111 52.3
MCO04G387 Micromonas commoda HOM05D005048 ORTHO05D006420 1.5e-26 123.2 113 50.4
Rhsim02G0216900 Rhododendron simsii HOM05D005048 ORTHO05D006420 2.6e-23 112.5 118 51.7
CDE05G1414 Ceratophyllum demersum HOM05D005048 ORTHO05D006420 8.5e-22 107.5 56 91.1
AUR62021458 Chenopodium quinoa HOM05D005048 ORTHO05D006420 1.5e-21 106.7 56 82.1
Glyma.08G036802 Glycine max HOM05D005048 ORTHO05D006420 5.5e-21 104.8 63 74.6
Peaxi162Scf00231g00512 Petunia axillaris HOM05D005048 ORTHO05D006420 3.6e-20 102.1 111 51.4
PRCOL_00004495 Prasinoderma coloniale HOM05D005048 ORTHO05D006420 5.7e-18 94.7 127 43.3
Psat7g014800 Pisum sativum HOM05D005048 ORTHO05D006420 6.5e-14 81.3 57 70.2
FvH4_1g05600 Fragaria vesca HOM05D005048 ORTHO05D006420 1.6e-12 76.6 71 59.2
MBI14_g17788_MAGBIO Magnolia biondii HOM05D005048 ORTHO05D006420 5.2e-11 71.6 51 66.7
FAN26G2936 Fragaria x ananassa HOM05D005048 ORTHO05D006420 1.1e-08 63.9 110 38.2
AUR62010945 Chenopodium quinoa HOM05D005048 ORTHO05D006420 7.0e-08 61.2 40 67.5
MBI01_g38807_MAGBIO Magnolia biondii HOM05D005048 ORTHO05D006420 7.0e-08 61.2 52 61.5


User provided reference genes

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