Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2791 Ceratophyllum demersum HOM05D005723 ORTHO05D005968 3.8e-162 574.7 276 100.0
CDE05G1067 Ceratophyllum demersum HOM05D005723 ORTHO05D005968 2.5e-145 518.8 276 92.0
MBI08_g23085_MAGBIO Magnolia biondii HOM05D005723 ORTHO05D005968 3.5e-107 392.1 286 69.9
CiPaw.09G030000 Carya illinoinensis HOM05D005723 ORTHO05D005968 8.3e-93 344.4 261 65.9
Zm00001eb104410 Zea mays HOM05D005723 ORTHO05D005968 7.1e-92 341.3 202 75.7
TAR623G0918 Trochodendron aralioides HOM05D005723 ORTHO05D005968 9.2e-92 340.9 292 58.6
Zm00001eb320790 Zea mays HOM05D005723 ORTHO05D005968 4.6e-91 338.6 199 75.9
Cfa020161 Carpinus fangiana HOM05D005723 ORTHO05D005968 6.0e-91 338.2 294 59.2
ATR0807G138 Amborella trichopoda HOM05D005723 ORTHO05D005968 1.5e-89 333.6 266 61.7
MD12G1056700 Malus domestica HOM05D005723 ORTHO05D005968 2.5e-89 332.8 222 70.7
QL07p023897 Quercus lobata HOM05D005723 ORTHO05D005968 2.1e-88 329.7 298 59.4
HPP92_009024 Vanilla planifolia HOM05D005723 ORTHO05D005968 2.8e-88 329.3 212 72.6
Sc13g0002300 Simmondsia chinensis HOM05D005723 ORTHO05D005968 4.7e-88 328.6 287 58.5
HanXRQChr13g0390481 Helianthus annuus HOM05D005723 ORTHO05D005968 1.4e-87 327.0 231 66.7
Actinidia17274 Actinidia chinensis HOM05D005723 ORTHO05D005968 2.4e-87 326.2 249 63.5
Gohir.A09G128200 Gossypium hirsutum HOM05D005723 ORTHO05D005968 4.0e-87 325.5 229 66.8
Potri.006G192800 Populus trichocarpa HOM05D005723 ORTHO05D005968 4.0e-87 325.5 226 68.1
Prupe.7G077500 Prunus persica HOM05D005723 ORTHO05D005968 4.0e-87 325.5 222 70.3
Carub.0004s2440 Capsella rubella HOM05D005723 ORTHO05D005968 5.2e-87 325.1 283 59.4
Sopen03g015150 Solanum pennellii HOM05D005723 ORTHO05D005968 6.8e-87 324.7 282 58.9
Nn2g15696 Nelumbo nucifera HOM05D005723 ORTHO05D005968 8.9e-87 324.3 292 58.2
Manes.08G043200 Manihot esculenta HOM05D005723 ORTHO05D005968 1.2e-86 323.9 293 58.0
Hma1.2p1_0648F.1_g195110 Hydrangea macrophylla HOM05D005723 ORTHO05D005968 2.0e-86 323.2 243 64.2
Sabra06G0148000 Salix brachista HOM05D005723 ORTHO05D005968 2.6e-86 322.8 227 66.5
Solyc03g062830.3 Solanum lycopersicum HOM05D005723 ORTHO05D005968 2.6e-86 322.8 240 64.6
AT2G42070 Arabidopsis thaliana HOM05D005723 ORTHO05D005968 4.4e-86 322.0 284 59.9
FAN14G2504 Fragaria x ananassa HOM05D005723 ORTHO05D005968 4.4e-86 322.0 303 56.4
RcHm_v2.0_Chr3g0479531 Rosa chinensis HOM05D005723 ORTHO05D005968 4.4e-86 322.0 227 67.0
Potri.016G045300 Populus trichocarpa HOM05D005723 ORTHO05D005968 5.8e-86 321.6 258 61.6
THA.LOC104802583 Tarenaya hassleriana HOM05D005723 ORTHO05D005968 5.8e-86 321.6 296 58.1
Lju124A25G33 Lonicera japonica HOM05D005723 ORTHO05D005968 7.6e-86 321.2 207 72.5
Ah.04g152500 Amaranthus hybridus HOM05D005723 ORTHO05D005968 9.9e-86 320.9 275 59.6
BcaNung04410 Brassica carinata HOM05D005723 ORTHO05D005968 9.9e-86 320.9 255 62.0
A05p02710 Brassica napus HOM05D005723 ORTHO05D005968 9.9e-86 320.9 255 62.7
FAN02G2166 Fragaria x ananassa HOM05D005723 ORTHO05D005968 9.9e-86 320.9 302 56.3
Gohir.D09G124200 Gossypium hirsutum HOM05D005723 ORTHO05D005968 9.9e-86 320.9 229 65.9
Atru.chr8.1119 Acer truncatum HOM05D005723 ORTHO05D005968 2.2e-85 319.7 227 66.1
Aa31LG1G24130 Aethionema arabicum HOM05D005723 ORTHO05D005968 2.2e-85 319.7 244 63.9
THA.LOC104824477 Tarenaya hassleriana HOM05D005723 ORTHO05D005968 3.8e-85 318.9 261 60.9
Gorai.006G143000 Gossypium raimondii HOM05D005723 ORTHO05D005968 4.9e-85 318.5 230 66.1
AL4G40430 Arabidopsis lyrata HOM05D005723 ORTHO05D005968 6.4e-85 318.2 284 58.8
BcaC02g12456 Brassica carinata HOM05D005723 ORTHO05D005968 6.4e-85 318.2 236 66.1
C04p03240 Brassica napus HOM05D005723 ORTHO05D005968 6.4e-85 318.2 236 66.1
BolC4t21962H Brassica oleracea HOM05D005723 ORTHO05D005968 6.4e-85 318.2 236 66.1
EL10Ac3g06909 Beta vulgaris HOM05D005723 ORTHO05D005968 1.9e-84 316.6 255 63.5
Thhalv10017043m.g Eutrema salsugineum HOM05D005723 ORTHO05D005968 1.9e-84 316.6 207 71.0
Thecc.05G171800 Theobroma cacao HOM05D005723 ORTHO05D005968 2.4e-84 316.2 198 72.7
CARHR137150 Cardamine hirsuta HOM05D005723 ORTHO05D005968 3.2e-84 315.8 284 57.4
Migut.K00036 Erythranthe guttata HOM05D005723 ORTHO05D005968 4.1e-84 315.5 245 62.4
GSVIVG01033492001 Vitis vinifera HOM05D005723 ORTHO05D005968 9.2e-84 314.3 234 64.5
A03p23560 Brassica napus HOM05D005723 ORTHO05D005968 1.2e-83 313.9 279 58.8
Aqoxy1G00026 Aquilegia oxysepala HOM05D005723 ORTHO05D005968 1.6e-83 313.5 209 69.4
BcaC01g05310 Brassica carinata HOM05D005723 ORTHO05D005968 1.6e-83 313.5 196 73.5
BraA05t19263Z Brassica rapa HOM05D005723 ORTHO05D005968 1.6e-83 313.5 227 67.4
SGA_v2.0_scaffold274G46488 Striga asiatica HOM05D005723 ORTHO05D005968 1.6e-83 313.5 295 55.3
BcaB01g03439 Brassica carinata HOM05D005723 ORTHO05D005968 2.1e-83 313.2 279 58.8
BraA03t11573Z Brassica rapa HOM05D005723 ORTHO05D005968 2.1e-83 313.2 279 58.8
Peaxi162Scf00258g00623 Petunia axillaris HOM05D005723 ORTHO05D005968 2.1e-83 313.2 246 62.2
TWI53G1132 Tripterygium wilfordii HOM05D005723 ORTHO05D005968 2.1e-83 313.2 260 61.9
COL.COLO4_33978 Corchorus olitorius HOM05D005723 ORTHO05D005968 2.7e-83 312.8 196 73.0
Hund24799 Selenicereus undatus HOM05D005723 ORTHO05D005968 2.7e-83 312.8 255 62.0
PGR142G4063 Punica granatum HOM05D005723 ORTHO05D005968 3.5e-83 312.4 233 65.7
BolC3t15179H Brassica oleracea HOM05D005723 ORTHO05D005968 7.8e-83 311.2 196 73.0
Nitab4.5_0000324g0030 Nicotiana tabacum HOM05D005723 ORTHO05D005968 7.8e-83 311.2 196 71.9
MELO3C009621.2 Cucumis melo HOM05D005723 ORTHO05D005968 1.3e-82 310.5 230 63.9
Medtr7g093280 Medicago truncatula HOM05D005723 ORTHO05D005968 6.6e-82 308.1 227 63.0
CANSAT64G2568 Cannabis sativa HOM05D005723 ORTHO05D005968 1.5e-81 307.0 196 71.9
PSO339G0271 Papaver somniferum HOM05D005723 ORTHO05D005968 1.5e-81 307.0 297 52.5
Lalb_Chr18g0047891 Lupinus albus HOM05D005723 ORTHO05D005968 1.9e-81 306.6 260 58.8
Sed0013306 Sechium edule HOM05D005723 ORTHO05D005968 1.9e-81 306.6 215 65.1
Cc06_g15920 Coffea canephora HOM05D005723 ORTHO05D005968 3.3e-81 305.8 263 59.3
MD14G1055000 Malus domestica HOM05D005723 ORTHO05D005968 4.3e-81 305.4 249 61.4
PSO384G0309 Papaver somniferum HOM05D005723 ORTHO05D005968 7.3e-81 304.7 296 52.4
Lj1g0008741 Lotus japonicus HOM05D005723 ORTHO05D005968 1.2e-80 303.9 210 66.7
Rhsim04G0096600 Rhododendron simsii HOM05D005723 ORTHO05D005968 1.6e-80 303.5 271 57.9
TPR.G18229 Trifolium pratense HOM05D005723 ORTHO05D005968 3.6e-80 302.4 224 62.5
Ca_08526_v3 Cicer arietinum L. HOM05D005723 ORTHO05D005968 6.2e-80 301.6 194 69.6
FvH4_6g22180 Fragaria vesca HOM05D005723 ORTHO05D005968 6.2e-80 301.6 273 59.0
Ciclev10013558m.g Citrus clementina HOM05D005723 ORTHO05D005968 8.1e-80 301.2 223 66.4
Psat3g068400 Pisum sativum HOM05D005723 ORTHO05D005968 8.1e-80 301.2 241 58.5
Glyma.09G111000 Glycine max HOM05D005723 ORTHO05D005968 1.1e-79 300.8 216 67.1
Glyma.19G148100 Glycine max HOM05D005723 ORTHO05D005968 1.1e-79 300.8 194 70.1
VMungo1383G0807 Vigna mungo HOM05D005723 ORTHO05D005968 2.4e-79 299.7 195 69.7
Phvul.007G260200 Phaseolus vulgaris HOM05D005723 ORTHO05D005968 3.1e-79 299.3 208 67.3
Pp3c12_9930 Physcomitrium patens HOM05D005723 ORTHO05D005968 4.0e-79 298.9 217 65.0
Phvul.001G142700 Phaseolus vulgaris HOM05D005723 ORTHO05D005968 1.2e-78 297.4 193 69.4
FAN05G3703 Fragaria x ananassa HOM05D005723 ORTHO05D005968 2.6e-78 296.2 285 56.1
VMungo0720G2417 Vigna mungo HOM05D005723 ORTHO05D005968 7.6e-78 294.7 238 58.8
Duzib093G0286 Durio zibethinus HOM05D005723 ORTHO05D005968 1.3e-77 293.9 211 67.3
MSTRG.6477 Avicennia marina HOM05D005723 ORTHO05D005968 1.6e-75 287.0 269 56.5
Oeu024483.2 Olea europaea HOM05D005723 ORTHO05D005968 2.7e-75 286.2 177 74.6
ClCG10G017570 Citrullus lanatus HOM05D005723 ORTHO05D005968 7.8e-75 284.6 230 61.3
Dinv14303 Davidia involucrata HOM05D005723 ORTHO05D005968 7.8e-75 284.6 204 69.1
C03p28100 Brassica napus HOM05D005723 ORTHO05D005968 1.7e-74 283.5 260 57.7
Lsat_1_v5_gn_5_163580 Lactuca sativa HOM05D005723 ORTHO05D005968 1.7e-74 283.5 238 59.2
arahy.Tifrunner.gnm1.ann1.USMU0G Arachis hypogaea HOM05D005723 ORTHO05D005968 5.1e-74 282.0 176 73.3
Glyma.03G145000 Glycine max HOM05D005723 ORTHO05D005968 8.7e-74 281.2 195 67.2
Sp4g24280 Schrenkiella parvula HOM05D005723 ORTHO05D005968 8.7e-74 281.2 256 57.8
Nitab4.5_0002488g0020 Nicotiana tabacum HOM05D005723 ORTHO05D005968 1.3e-72 277.3 217 63.1
SMO358G0738 Selaginella moellendorffii HOM05D005723 ORTHO05D005968 6.9e-71 271.6 190 64.7
DCAR_019848 Daucus carota HOM05D005723 ORTHO05D005968 9.0e-71 271.2 221 62.4
SalBow1G1145 Salvia bowleyana HOM05D005723 ORTHO05D005968 4.5e-70 268.9 206 64.6
CsaV3_3G038770 Cucumis sativus L. HOM05D005723 ORTHO05D005968 3.8e-69 265.8 192 66.7
Cpa.g.sc85.50 Carica papaya HOM05D005723 ORTHO05D005968 1.2e-67 260.8 158 76.6
AUR62015361 Chenopodium quinoa HOM05D005723 ORTHO05D005968 3.5e-67 259.2 161 75.8
Oeu034265.1 Olea europaea HOM05D005723 ORTHO05D005968 3.3e-65 252.7 156 75.0
AUR62012024 Chenopodium quinoa HOM05D005723 ORTHO05D005968 4.3e-65 252.3 150 77.3
HanXRQChr01g0009761 Helianthus annuus HOM05D005723 ORTHO05D005968 9.0e-63 244.6 157 70.7
ECA248G2266 Erigeron canadensis HOM05D005723 ORTHO05D005968 8.4e-61 238.0 157 69.4
arahy.Tifrunner.gnm1.ann1.4E6ATU Arachis hypogaea HOM05D005723 ORTHO05D005968 1.1e-60 237.7 226 57.1
Cre06.g285200 Chlamydomonas reinhardtii HOM05D005723 ORTHO05D005968 1.9e-60 236.9 226 50.9
SEGI_25574 Sequoiadendron giganteum HOM05D005723 ORTHO05D005968 7.1e-60 235.0 138 78.3
PRCOL_00004505 Prasinoderma coloniale HOM05D005723 ORTHO05D005968 9.0e-55 218.0 205 50.7
arahy.Tifrunner.gnm1.ann1.WEU379 Arachis hypogaea HOM05D005723 ORTHO05D005968 1.7e-53 213.8 236 48.7
unitig_748.g7589 Utricularia gibba HOM05D005723 ORTHO05D005968 3.2e-52 209.5 143 68.5
Os09g0553300 Oryza sativa ssp. japonica HOM05D005723 ORTHO05D005968 2.7e-51 206.5 115 79.1
HPP92_009080 Vanilla planifolia HOM05D005723 ORTHO05D005968 3.0e-50 203.0 135 69.6
Mapoly0013s0082 Marchantia polymorpha HOM05D005723 ORTHO05D005968 2.6e-46 189.9 135 65.2
Actinidia38586 Actinidia chinensis HOM05D005723 ORTHO05D005968 3.4e-46 189.5 156 60.3
Haze_19996 Corylus avellana HOM05D005723 ORTHO05D005968 5.9e-46 188.7 124 74.2
TWI74G1261 Tripterygium wilfordii HOM05D005723 ORTHO05D005968 1.2e-43 181.0 249 45.4
AagrBONN_evm.TU.Sc2ySwM_117.3227 Anthoceros agrestis HOM05D005723 ORTHO05D005968 6.1e-43 178.7 124 65.3
MSTRG.10844 Avicennia marina HOM05D005723 ORTHO05D005968 7.9e-43 178.3 126 69.0
Sed0026560 Sechium edule HOM05D005723 ORTHO05D005968 2.5e-41 173.3 204 45.6
arahy.Tifrunner.gnm1.ann1.HLHI9C Arachis hypogaea HOM05D005723 ORTHO05D005968 4.5e-38 162.5 117 67.5
C05p20370 Brassica napus HOM05D005723 ORTHO05D005968 1.0e-37 161.4 115 71.3
BolC5t30732H Brassica oleracea HOM05D000589 ORTHO05D005968 1.0e-37 161.4 115 71.3
Pp3c3_14150 Physcomitrium patens HOM05D005723 ORTHO05D005968 2.0e-33 147.1 174 45.4
CBR_g29504 Chara braunii HOM05D005723 ORTHO05D005968 4.8e-32 142.5 153 44.4
Gohir.A10G137800 Gossypium hirsutum HOM05D005723 ORTHO05D005968 1.8e-26 124.0 90 70.0
Gohir.A13G075901 Gossypium hirsutum HOM05D005723 ORTHO05D005968 2.8e-24 116.7 78 73.1
BolC3t15180H Brassica oleracea HOM05D005723 ORTHO05D005968 1.7e-21 107.5 78 69.2
MCO15G614 Micromonas commoda HOM05D005723 ORTHO05D005968 2.2e-16 90.5 164 33.5
vmacro09121 Vaccinium macrocarpon HOM05D005723 ORTHO05D005968 6.3e-16 89.0 104 50.0
BcaC05g26057 Brassica carinata HOM05D005723 ORTHO05D005968 5.3e-15 85.9 61 67.2
Haze_19995 Corylus avellana HOM05D005723 ORTHO05D005968 1.4e-10 71.2 103 36.9


User provided reference genes

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